Discrete Diffusion Model for Multi-Modal Drug Discovery (Ongoing Project): Developing a novel discrete diffusion model aimed at learning a bidirectional mapping between amino acid sequences and multi-modal protein structures. The model is designed to generate both novel amino acid sequences and their corresponding protein structures by integrating three complementary representations: embeddings from large language models (LLMs), graph-based features from graph neural networks (GNNs), and textual sequence descriptors.
Regret-Bounded Constraint Active Search for Multi-Objective Optimization (Ongoing Project): Designing a new algorithm that leverages regret-bounded constraint active search in multi-objective optimization settings. The approach is intended to improve search efficiency and constraint satisfaction in high-stakes experimental design problems.
Quantum Non-Linear Bandit Optimization: Proposed a quantum-enhanced algorithm for non-linear bandit optimization, focusing on reducing regret in sequential decision-making. The work is published on arXiv: https://arxiv.org/abs/2503.03023
Database Systems I Project: Course Scheduler. GitHub Link: https://github.com/ZakSiam/CourseScheduler
Software Engineering Project: Finance Management System. GitHub Link: https://github.com/ZakSiam/ICSI-518-Team-5-Finance-Management-System
Machine Learning Project: Neural Networks: Custom Implementation Using Python Math Libraries. GitHub Link: https://github.com/ZakSiam/Neural-Networks-Custom-Implementation-Using-Python-Math-Libraries
MSc Research Project: Medical Tomographic Image Reconstruction Based on Deep Learning
Directed Research and Senior Design Project (Undergraduate): A Hybridized Deep Neural Network Integrated with Fuzzy Analytic Hierarchy Process Based Spatial Flood Risk Framework. GitHub Link: https://github.com/ZakSiam/Flood-Risk-Assessment---A-Case-of-Bangladesh
Junior Design Project (Undergraduate): Reconstructing Face Images from Brain fMRI Activity using Deep Generative Neural Network.
Resume Classification using BERT: This project intends to leverage the power of the Bidirectional Encoder Representations from Transformers (BERT) model to automate the categorization of different job resumes. GitHub Link: https://github.com/ZakSiam/Resume-Classification-using-BERT
Concepts of Programming Language Project (Undergraduate): Reading and Searching Strings from a Large Survey Dataset using C++, Python & Shell Script.
Software Engineering Project (Undergraduate): A Blood Bank Management System for Thalassemia Patients. https://ssanik24.wixsite.com/mysite
Database Management System Project (Undergraduate): Genome Sequence Information Bank using PHP, HTML & MySQL.
Programming Language II Project (Undergraduate): Blood Bank Management System using Java Swing.
Computer Organization and Architecture Project (Undergraduate): 16-bit Compiler and Data Path Design
Digital Logic Design Project (Undergraduate): Fire Alarm Security System using Integrated Circuits
Programming Language I Project (Undergraduate): Blood Bank Management System using C Programming Language.