Since 2010
Parada C, Yan CC, Hung CY, Tu IP, Hsu CP*, Shih YL*. (2025) Growth-dependent concentration gradient of the oscillating Min system in Escherichia coli. Journal of Cell Biology 224(2): e202406107. DOI: 10.1083/jcb.202406107
Santos MNM, Pintor KL, Hsieh PY, Cheung YW, Sung LK, Shih YL, Lai EM*. (2024). Agrobacteria deploy two classes of His-Me finger superfamily nuclease effectors exerting different antibacterial capacities against specific bacterial competitors. Frontiers in Microbiology 15:1351590. DOI: 10.3389/fmicb.2024.1351590.
Nguyen VHT, Chen X, Parada C, Luo AC, Shih O, Jeng US, Huang CY, Shih YL*, Ma C*. (2023). Structure of the heterotrimeric membrane protein complex FtsB-FtsL-FtsQ of the bacterial divisome. Nature Communications 14(1): 1903. DOI: 10.1038/s41467-023-37543-4
Sun YJ, Bai F, Luo AC, Zhuang XY, Lin TS, Shih YL, Lo CJ*. (2021). Probing bacterial cell wall growth by tracing wall-anchored protein complexes. Nature Communications 12(1): 2160. DOI: 10.1038/s41467-021-22483-8
Hsieh PY, Meng FC, Guo CW, Hu KH, Shih YL*, Cheng WC*. (2021). Harnessing fluorescent moenomycin A antibiotics for bacterial cell wall imaging studies. Chembiochem 22(24): 3462-3468. DOI: 10.1002/cbic.202100433
Wu CF, Lien YW, Bondage D, Lin JS, Pilhofer M, Shih YL, Chang J, Lai EM*. (2020). Effector loading onto the VgrG carrier activates type VI secretion system assembly. EMBO Reports 21(1): e47961. DOI: 10.15252/embr.201947961
Huang WC, Hashimoto M, Shih YL, Wu CC, Lee MF, Chen YL, Wu JJ, Wang MC, Lin WH, Hong MY, and Teng CH*. (2020). Peptidoglycan endopeptidase Spr of uropathogenic Escherichia coli contributes to kidney infections and competitive fitness during bladder colonization. Frontiers in Microbiology 11: 586214. DOI: 10.3389/fmicb.2020.586214
Shih YL*, Huang LT, Tu YM, Lee BF, Bau YC, Hong CY, Lee HL, Shih YP, Hsu MF, Lu ZX, Chen JS, Chao L*. (2019). Active transport of membrane components by self-organization of the Min proteins. Biophysical Journal 116(8): 1469-1482. DOI: 10.1016/j.bpj.2019.03.011 Featured in journal cover, BPS blog.
Liao JH, Chien CT, Wu, HY, Huang KF, Wang I, Ho MR, Tu IF, Lee IM, Li W, Shih YL, Wu CY, Lukyanov P, Hsu STD, Wu SH. (2016). A multivalent marine lectin from Crenomytilus grayanus possesses anti-cancer activity through recognizing globotriose Gb3. Journal of the American Chemical Society 138(14): 4787-4795. DOI: 10.1021/jacs.6b00111
Liang SY, Lin SY, Chiang I, Shih YL*. (2016). Quantitative inner membrane proteome datasets of the wild-type and the ∆min mutant of Escherichia coli. Data in Brief 8: 304-307. DOI: 10.1016/j.dib.2016.05.043
Lee HL, Chiang IC, Liang SY, Lee DY, Chang GD, KY Wang, Lin SY, Shih YL*. (2016). Quantitative proteomics analysis reveals the Min system of Escherichia coli modulates reversible protein association with the inner membrane. Molecular & Cellular Proteomics 15(5): 1572-1583. DOI: 10.1074/mcp.M115.053603
Chen WJ, Kuo TY, Hsieh FC, Chen PY, Wang CS, Shih YL, Lai YM, Liu JR, Yang YL, and Shih MC*. (2016). Involvement of type VI secretion system in secretion of iron chelator pyoverdine in Pseudomonas taiwanensis. Scientific Reports 6: 32950. DOI: 10.1038/srep32950
Rujiviphat J, Wong MK, Won A, Shih YL, Yip CM and McQuibban AG*. (2015). Mitochondrial genome maintenance 1 (Mgm1) protein alters membrane topology and promotes local membrane bending. Journal of Molecular Biology 427(16): 2599-2609. DOI: 10.1016/j.jmb.2015.03.006
Chiang YL, Chang YC, Mak HM, Chiang IC, Zheng M, Chang CI, Hwang IS* and Shih YL*. (2015). Atomic force microscopy characterization of protein fibrils formed by the amyloidogenic region of the bacterial protein MinE on mica and a supported lipid bilayer. PLoS One 10(11): e0142506. DOI: 10.1371/journal.pone.0142506
Zheng M, Chiang YL, Lee HL, Kong LR, Hsu ST, Hwang IS, Rothfield LI and Shih YL*. (2014). Self-assembly of MinE on the membrane underlies formation of the MinE ring to sustain function of the Escherichia coli Min system. Journal of Biological Chemistry 289(31): 21252-21266. DOI: 10.1074/JBC.M114.571976
Shih YL* and Zheng M. (2013). Spatial control of the cell division site by the Min system in Escherichia coli. Environmental Microbiology 15(12): 3229-3239. Review. DOI: 10.1111/1462-2920.12119
Shih YL*, Huang KF, Lai HM, Liao JH, Lee CS, Chang CM, Mak HM, Hsieh CW and Lin CC (2011) (2011). The N-terminal amphipathic helix of the topological specificity factor MinE is associated with shaping membrane curvature. PLoS One 6(6): e21425. DOI: 10.1371/journal.pone.0021425
Hsieh CW, Lin TY, Lai HM, Lin CC, Hsieh TS and Shih YL*. (2010). Direct MinE-membrane interaction contributes to the proper localization of MinDE in E. coli. Molecular Microbiology 75(2): 499-512. DOI: 10.1111/j.1365-2958.2009.07006.x Recommended in Faculty of 1000 Biology.
Before 2010
Vats P, Shih YL and Rothfield L*. (2009). Assembly of the MreB-associated cytoskeletal ring of Escherichia coli. Molecular Microbiology 72(1): 170-182. DOI: 10.1111/j.1365-2958.2009.06632.x
Pradel N, Santini CL, Bernadac A, Shih YL, Goldberg MB and Wu LF*. (2007). Polar positional information in Escherichia coli spherical cells. Biochemical and Biophysical Research Communications 353(2): 493-500. DOI: 10.1016/j.bbrc.2006.12.054
Shih YL and Rothfield LI*. (2006). The bacterial cytoskeleton. Microbiology and Molecular Biology Reviews 70(3): 729-754. Review. DOI: 10.1128/MMBR.00017-06
Rothfield LI*, Taghbalout A and Shih YL Spatial control of bacterial division-site placement. Nature Reviews Microbiology 3(12): 959-968. Review. DOI: 10.1038/nrmicro1290
Shih YL*, Kawagishi I and Rothfield LI. (2005). The MreB and Min cytoskeletal-like systems play independent roles in prokaryotic polar differentiation. Molecular Microbiology 58(4): 917-928. DOI: 10.1111/j.1365-2958.2005.04841.x
Shih YL, Le T and Rothfield LI*. (2003). Division site selection in Escherichia coli involves dynamic redistribution of Min proteins within coiled structures that extend between the two cell poles. Proceedings of the National Academy of Sciences of the United States of America 100(13): 7865-7870. DOI: 10.1073/pnas.1232225100
Shih YL, Fu X, King GF, Le T and Rothfield LI*. (2002). Division site placement in E. coli: mutations that prevent formation of the MinE ring lead to loss of the normal midcell arrest of growth of polar MinD membrane domains. EMBO Journal 21(13): 3347-3357. DOI: 10.1093/emboj/cdf323
Rothfield LI*, Shih YL and King GF. (2001). Polar explorers: Membrane proteins that determine division site placement. Cell 106(1): 13-16. Review. DOI: 10.1016/S0092-8674(01)00432-9
Fu X, Shih YL, Zhang Y and Rothfield LI*. (2001). The MinE ring required for proper placement of the division site is a mobile structure that changes its cellular location during the Escherichia coli division cycle. Proceedings of the National Academy of Sciences of the United States of America 98(3): 980-985. DOI: 10.1073/pnas.031549298
King GF, Shih YL, Maciejewski MW, Bains NPS, Pan B, Rowland SL, Mullen GP and Rothfield LI*. (2000). Structural basis for the topological specificity function of MinE. Nature Structure Biology 7(11): 1013-1017. DOI: 10.1038/80917
Before 2000
Shih YL, Harris SJ, Borner G, Rivet MM and Salmond GPC*. (1999). The hexY genes of Erwinia carotovora ssp. carotovora and ssp. atroseptica encode novel proteins that regulate virulence and motility co-ordinately. Environmental Microbiology 1(6): 535-547. DOI: 10.1046/j.1462-2920.1999.00060.x
Harris SJ, Shih YL, Bentley SD and Salmond GPC*. (1998). The hexA gene of Erwinia carotovora encodes a LysR homologue and regulates motility and the expression of multiple virulence determinants. Molecular Microbiology 28(4): 705-717. DOI: 10.1046/j.1365-2958.1998.00825.x
Toth I, Mulholland V, Copper V, Bentley S, Shih YL, Perombelon M and Salmond GPC*. (1997). Generalized transduction in the potato blackleg pathogen Erwinia carotovora subsp. atroseptica by bacteriophage M1. Microbiology 143(7): 2433-2438. DOI: 10.1046/j.1462-2920.1999.00060.x