PEER-REVIEWED JOURNALS AND CONFERENCES

(27 articles with 238 citations. First author of 16 publications out of 27 

1. Y. M. Kassim, K. Palaniappan, F. Yang, M. Poostchi, N. Palaniappan, R. J. Maude, S. Antani, S. Jaeger, " Clustering-Based Dual Deep Learning Architecture for Detecting Red Blood Cells in Malaria Diagnostic Smears," Journal of Biomedical and Health Informatics, 2020.

     https://github.com/nlm-malaria/RBCNet

2. Y. M. Kassim and S. Jaeger, " A Cell Augmentation Tool for Blood Smear Analysis," IEEE Applied Imagery Pattern Recognition (AIPR), virtual-Washington DC, USA, Oct 2020.

3. Y. M. Kassim, F. Yang, R. J. Maude, S. Jaeger, “Rapid, Accurate, and Automated Red Blood Cell Detection in Malaria Microscopy Smears,” Late-Breakers abstracts, American Society of Tropical Medicine and Hygiene (ASTMH), virtual-CANADA Nov 2020.

4. M. M. H. Shuvo, Y. M. Kassim, F. Bunyak, O. V. Glinskii, L. Xie, V. V. Glinsky, V. H. Huxley, M. M. Thakkar, K. Palaniappan, “Multi-focus Image Fusion for Confocal MicroscopyUsing U-Net Regression Map,” IEEE International Conference on Pattern Recognition (ICPR), virtual-Milano, Jan 2021.

5. Y. M. Kassim, Michael E. Byrne, Cristy Burch, Kevin Mote, Jason Hardin, David R. Larsen, K. Palaniappan, "Small Object Bird Detection in Infrared Drone Videos Using Mask R-CNN Deep Learning," IEEE International Symposium on Electronic Imaging (EI 2020), Burlingame, California, 2020.

6. Y. M. Kassim, O. Glinskii, V. Glinsky, V. Huxley, G. Guidoboni, K. Palaniappan, "Deep U-Net Regression And Hand-Crafted Feature Fusion for Accurate Blood Vessel Segmentation," IEEE International Conference on Image Processing (ICIP), Taipei, Taiwan, 2019.

7. Y. M. Kassim, O. Glinskii, V. Glinsky, V. Huxley, K. Palaniappan, "Patch-Based Semantic Segmentation for Detecting Arterioles and Venules in Epifluorescence Imagery," IEEE Applied Imagery Pattern Recognition (AIPR), Washington DC, USA, Oct 2018.

8. Y. M. Kassim, K. Palaniappan, "Sensitivity of Cross-Trained Deep CNNs for Retinal Vessel," IEEE Engineering in Medicine and Biology Society (EMBC'18), Honolulu, HI, USA, Jul 2018.

9. Y. M. Kassim, N. M. Al-Shakarji, E. Asante, A. Chandrasekhar and K. Palaniappan. "Dissecting Branchiomotor Neuron Circuits in Zebrafish – Toward High-Throughput Automated Analysis of Jaw Movements," IEEE International Conference on Symposium on Biomedical Imaging (ISBI), Washington, D.C., USA, Apr 2018.

10. Y. M. Kassim and K. Palaniappan. "Extracting Retinal Vascular Networks Using Deep Learning Architecture," IEEE International Conference on Bioinformatics and Biomedicine (BIBM), Kansas city, Missouri, USA, Nov 2017.

11. Noor Al-Shakarji* , Y. M. Kassim*, and K. Palaniappan. "Unsupervised Learning Method for Plant Segmentation and Leaf Detection, " IEEE Applied Imagery Pattern Recognition (AIPR), Washington DC, USA, Oct 2017.

12. Y. M. Kassim, V. B. S. Prasath, O. Glinskii, V. Glinsky, V. Huxley, and K. Palaniappan. " Microvasculature Segmentation of Arterioles Using Deep CNN," IEEE International Conference on Image Processing (ICIP 2017), Beijing, China, Sep 2017.

13. Y. M. Kassim, O. Glinskii, V. Glinsky, V. Huxley, and K. Palaniappan. " Deep Learning Segmentation for Epifluorescence Microscopy Images," Microscopy and Microanalysis (M&M), St. Louis, MO, USA, Aug 2017.

14. V. B. S. Prasath*, Y. M. Kassim*, Z. A. Oraibi*, J.-B. Guiriec, A. Hafiane, G. Seetharaman, and K. Palaniappan. "HEp-2 Cell Classification and Segmentation Using Motif Texture Patterns and Spatial Features with Random Forests," IEEE International Conference on Pattern Recognition (ICPR), Cancun, Mexico, Dec 2016.

15. Y. M. Kassim, V. B. S. Prasath, O. Glinskii, V. Glinsky, V. Huxley, and K. Palaniappan. "Confocal Vessel Structure Segmentation with Optimized Feature Bank and Random Forests," IEEE Applied Imagery Pattern Recognition (AIPR), Washington DC, USA, Oct 2016.

16. S. Meena, V. B. S. Prasath, Y. M. Kassim, R. J. Maude, O. Glinskii, V. Glinsky, V. Huxley, and K. Palaniappan. "Multiquadric Spline-based Interactive Segmentation of Vascular Networks," IEEE/EMBS International Conference, Florida, USA, Aug 2016.

17. Y. M. Kassim, V. B. S. Prasath, R. Pelapur, O. Glinskii, R. J. Maude, V. Glinsky, V. Huxley, and K. Palaniappan. “Random Forests for Dura Mater Microvasculature Segmentation Using Epifluorescence Images,” IEEE/EMBS International Conference, Florida, USA, Aug 2016, pp. 2901–2904. EMBS Student Paper Competition Finalist.