A two-day in-person workshop designed to introduce the world of theoretical and computational chemistry to PG & UG students & graduates, research scholars, and early-stage researchers. The program combines lectures, demonstrations, and hands-on sessions using widely used computational tools and software packages.
Date: 16 - 17 Sep 2025
Venue: Govt Brennen College, Dharmadam
By the end of the course, participants will have the skills to
✅ Perform basic computational chemistry calculations
✅ Analyze results for practical and research applications
✅ Use open-source software for learning and research
✅ Build confidence to explore advanced topics
Bash command to copy a file from Download folder 🔗
Bash command to set the path 🔗
Bash command to create cp2orbit command 🔗
Upgrade Ubuntu & Install essential softwares🔗
Python Code for Student Assessment 🔗
Avogadro Installation File🔗 (Update: Use orca enhanced avogadro exe file - Link Login required)
G09 & GaussView Installation Files 🔗
Computational Chemistry Booklet 🔗
See my CCLab page
Water SP: Your first ORCA Input File
!HF DEF2-SVP PRINTMOS PRINTBASIS
* xyz 0 1
O 0.0000 0.0000 0.0626
H -0.7920 0.0000 -0.4973
H 0.7920 0.0000 -0.4973
*
Hydroxide ion single point
!HF DEF2-SVP
* int 0 2
O 0 0 0 0.0 0.0 0.0
H 1 0 0 0.9903 0.0 0.0
*
Water DFT
!B3LYP DEF2-SVP PRINTMOS PRINTBASIS
%output
print[p_mos] 1
print[p_basis] 2
end
* xyz 0 1
O -3.56626 1.77639 0.00000
H -2.59626 1.77639 0.00000
H -3.88959 1.36040 -0.81444
*
H2 SP (UseSymmetry keyword)
! UseSymmetry SP B3LYP def2-SVP PRINTMOS PRINTBASIS
* xyz 0 1
H 0.000000 0.000000 0.000000
H 0.740000 0.000000 0.000000
*
H2 Potential Energy Scan
! B3LYP def2-SVP OPT
%geom Scan
B 0 1 = 0.3, 3.0, 22
end
end
* int 0 1
H 0 0 0 0.000 0.000 0.00
H 1 0 0 0.500 0.000 0.00
*
H2 Geometry Optimization
! OPT B3LYP def2-SVP PRINTMOS PRINTBASIS
* xyz 0 1
H 0.000000 0.000000 0.000000
H 0.740000 0.000000 0.000000
*
Methanol Geometry Optimization
! RHF OPT def2-SVP PRINTMOS PRINTBASIS
* xyz 0 1
O -4.05138 -0.11407 0.00000
C -3.08138 -0.11407 0.00000
H -4.37471 0.79773 -0.07056
H -2.72472 -1.11987 0.07783
H -2.72472 0.45623 0.83213
H -2.72472 0.32143 -0.90996
*
H2 Frequency calculation
! FREQ B3LYP def2-SVP PRINTMOS PRINTBASIS
* xyz 0 1
H 0.000000 0.000000 0.000000
H 0.740000 0.000000 0.000000
*
Methanol Frequency Calculation using Optimized Geometry (use the output of 7)
Transition state optimization (NEB) of the following reaction. Full input-output files can be downloaded here.
File: hydrolysis.inp
!PBEh-3c NEB-TS FREQ
%NEB
NEB_END_XYZFILE "product.xyz"
END
*XYZFILE 0 1 reactant.xyz
File: reactant.xyz
14
C -3.91182471867804 -0.29740337562449 -0.08146991239299
C -2.55541244064569 0.30686965486155 0.14448997964370
H -4.04778109653590 -1.17478518607501 0.55114544766598
H -4.01760096751969 -0.62864793467515 -1.11447676001953
H -4.68756038254056 0.42811501690492 0.14372689072078
O -1.58890277145472 -0.55120693780504 -0.15332142945001
C -0.24124898702283 -0.11849073979619 0.01881053299661
H -0.00551048853087 0.73223540459326 -0.62014731745322
H 0.37809289862192 -0.96512901217128 -0.26312407178767
H -0.03357349341397 0.15523590534200 1.05285605881498
O -2.36577790365828 1.42614928705777 0.54645130784169
O 0.16419926236366 2.97730296461285 1.12447893057070
H -0.05730841690068 3.84720465678396 1.45600240984125
H -0.68288049408434 2.54915029599085 0.96617793300773
File: product.xyz
14
C -2.95446510188526 -0.23525275443810 -0.10550187831397
C -2.20930026825989 0.97989509541554 0.35668736033914
H -3.59995668590411 -0.60519475737244 0.69227878475167
H -2.26734074134479 -1.04298213356273 -0.35902842132034
H -3.56563817887517 0.01067253660282 -0.96824180822463
O 0.06594033182687 -1.89635100025044 0.33206273764187
C 0.96141448329986 -1.23467580278127 -0.52101365975636
H 0.50574570186175 -0.39870488204523 -1.06652943738273
H 1.30859855820204 -1.95448015263317 -1.26125442630102
H 1.84593979621532 -0.84847254373077 -0.00020954863231
O -2.31618373645267 2.08782431296547 -0.08278492123435
O -1.36964775834650 0.69085118655374 1.37267097866883
H -0.93013901170627 1.50922486419084 1.64014730723366
H -0.23867738863116 -1.26789396891424 0.99098693253054