Publications

[15]  Tamarit D, Köstlbacher S, Appler KE, Panagiotou K, De Anda V, Rinke C, Baker BJ, Ettema TJG. Description of Asgardarchaeum abyssi gen. nov. spec. nov., a novel species within the class Asgardarchaeia and phylum Asgardarchaeota in accordance with the SeqCode. Syst Appl Microbiol. 2024;47(4):126525. [LINK] 

[14] Sarno N., Hyde E., De Anda, V., & Baker, B. J. (2024). Beyond methane, new frontiers in anaerobic microbial hydrocarbon utilizing pathways. Microbial Biotechnology, 17, e14508. [LINK] 

[13] Vázquez Rosas Landa, M., De Anda, V., Rohwer, R. R., Angelova, A., Waldram, G., Gutierrez, T., & Baker, B. J. (2023). Exploring novel alkane-degradation pathways in uncultured bacteria from the North Atlantic Ocean. mSystems, 8(5), e0061923.  [LINK] 

[12] Eme, L.+, Tamarit, D.+, Caceres, E.F+. Stairs C, De Anda V et al Inference and reconstruction of the heimdallarchaeial ancestry of eukaryotes. Nature (2023)  [LINK] 

[11] Bojanova, D.P., De Anda, V.., Haghnegahdar, M.A. et al. Well-hidden methanogenesis in deep, organic-rich sediments of Guaymas Basin. ISME J 17, 1828–1838 (2023).  [LINK] 

[10] Carlton, J.D., Langwig, M.V., Gong, X., Aguilar-Pine EJ., Vazquez M, Seitz K., Baker BJ* and De Anda V*. Expansion of Armatimonadota through marine sediment sequencing describes two classes with unique ecological roles. ISME COMMUN. 3, 64 (2023).  [LINK] 

[9]  Dichiera AM, De Anda V, Gilmour KM, Baker BJ, Esbaugh AJ. Functional divergence of teleost carbonic anhydrase 4. Comp Biochem Physiol A Mol Integr Physiol. 2023 Mar;277:111368  [LINK] 

[8] Gong X, Del Río ÁR, Xu L, Chen Z, Langwig MV, Su L, Sun M, Huerta-Cepas J, De Anda V*, Baker BJ*.New globally distributed bacterial phyla within the FCB superphylum. Nat Commun 13, 7516 (2022)  [LINK] 

[7]  Rambo I, Langwig M.V Leao P, De Anda V and Baker BJ,  Genomes of six viruses that infect Asgard archaea from deep-sea sediments. Nat Microbiol 7, 953–961 (2022) [LINK] 

[6]  Langwig M, De Anda V+, Dombrowski N, Seitz K, Rambo  I,  Greening C,  Teske A,  and Baker BJ. Large-scale protein level comparison of Deltaproteobacteria reveals cohesive metabolic groups. ISME  Open Access [LINK] Editor's choice 

[5]  De Anda V, Chen Lin-Xing, Dombrowski N, Zheng-Shuang H, Hong-Chen J, Banfield Jill F, Li Wen-Ju, Baker BJ (2021). Brockarchaeota, a novel archaeal phylum with unique and versatile carbon cycling pathways. Nat Commun Open Access [LINK]

[4]  Hernandez L, Vicens A, Eguiarte L, Souza V, De Anda V, Gonzales JM (2020). Evolutionary history of dimethylsulfoniopropionate (DMSP) demethylation enzyme DmdA in marine bacteria. PeerJ [LINK]

[3]  Baker BJ, De Anda V, Seitz K W., Dombrowski N, Santoro AE and Lloyd KG. (2020). Diversity, ecology and evolution of Archaea. Nat Microbiol [LINK][PDF]

[2]  De Anda V, Zapata-Peñasco I, Blaz J, Poot-Hernández AC, Contreras-Moreira B, González-Laffitte M, Gámez-Tamariz N, Hernández- Rosales M, Eguiarte LE and Souza V (2018). Understanding the Mechanisms Behind the Response to Environmental Perturbation in Microbial Mats: A Metagenomic-Network Based Approach. Front. Microbiol. 9:2606.  doi: 10.3389/fmicb.2018.02606. Open Access [LINK]

[1] De Anda V*, Zapata-Peñasco I, Poot-Hernandez AC, Eguiarte LE, Contreras-Moreira B, Souza V. (2017) MEBS, a software platform to evaluate large (meta)genomic collections according to their metabolic machinery: unraveling the sulfur cycle. Gigascience;6(11):1-17. Open Access LINK]

De Anda V, Zapata-Peñasco I., Eguiarte L.E., Souza V(2018) Towards a Comprehensive Understanding of Environmental Perturbations in Microbial Mats from the Cuatro Cienegas Basin by Network Inference. In: García-Oliva F., Elser J., Souza V. (eds) Ecosystem Ecology and Geochemistry of Cuatro Cienegas. Cuatro Ciénegas Basin: An Endangered Hyperdiverse Oasis. Springer, Cham [LINK] [PDF]

De Anda V, Zapata-Peñasco I., Eguiarte L.E., Souza V (2018) The Sulfur Cycle as the Gear of the “Clock of Life”: The Point of Convergence Between Geological and Genomic Data in the Cuatro Cienegas Basin. In: García-Oliva F., Elser J., Souza V. (eds) Ecosystem Ecology and Geochemistry of Cuatro Cienegas. Cuatro Ciénegas Basin: An Endangered Hyperdiverse Oasis. Springer, Cham [LINK][PDF]

Valentin-Alvarado LE, Shi LD, Appler K, Crits-Christoph A, Cui Michael, De Anda V, Leão P,  Adler B, Roberts R, Sachdeva R, Baker B, Savage D, Banfield J. Genetic elements and defense systems drive diversification and evolution in Asgard archaea. bioRxiv 2024.03.22.586370; doi: https://doi.org/10.1101/2024.03.22.586370.
In review Nat Ecol Evol

Leão P, Little ME, Appler K, Sahaya D, Aguilar-Pine E, Currie K,. Finkelstein IJ, De Anda V, Baker B.  Asgard archaea defense systems and their roles in the origin of immunity in eukaryotes. PREPRINT (Version 1)   bioRxiv 2023.09.13.557551; doi:  [https://doi.org/10.21203/rs.3.rs-2838418/v1] [LINK] In review Nat Comm

Langwig MV, De Anda V, et al. Metabolic capacity is maintained despite shifts in microbial diversity in estuary sediments,April 2023, PREPRINT (Version 1) available at Research Square [https://doi.org/10.21203/rs.3.rs-2838418/v1] [LINK]