Publications

Peer-reviewed

* corresponding author + equal contribution

[13] Vázquez Rosas Landa, M., De Anda, V., Rohwer, R. R., Angelova, A., Waldram, G., Gutierrez, T., & Baker, B. J. (2023). Exploring novel alkane-degradation pathways in uncultured bacteria from the North Atlantic Ocean. mSystems, 8(5), e0061923.  [LINK] 

[12] Eme, L.+, Tamarit, D.+, Caceres, E.F+. Stairs C, De Anda V et al Inference and reconstruction of the heimdallarchaeial ancestry of eukaryotes. Nature (2023)  [LINK] 

[11] Bojanova, D.P., De Anda, V.., Haghnegahdar, M.A. et al. Well-hidden methanogenesis in deep, organic-rich sediments of Guaymas Basin. ISME J 17, 1828–1838 (2023).  [LINK] 

[10] Carlton, J.D., Langwig, M.V., Gong, X., Aguilar-Pine EJ., Vazquez M, Seitz K., Baker BJ* and De Anda V*. Expansion of Armatimonadota through marine sediment sequencing describes two classes with unique ecological roles. ISME COMMUN. 3, 64 (2023).  [LINK] 

[9Dichiera AM, De Anda V, Gilmour KM, Baker BJ, Esbaugh AJ. Functional divergence of teleost carbonic anhydrase 4. Comp Biochem Physiol A Mol Integr Physiol. 2023 Mar;277:111368  [LINK] 

[8] Gong X, Del Río ÁR, Xu L, Chen Z, Langwig MV, Su L, Sun M, Huerta-Cepas J, De Anda V*, Baker BJ*.New globally distributed bacterial phyla within the FCB superphylum. Nat Commun 13, 7516 (2022)  [LINK] 

[7Rambo I, Langwig M.V Leao P, De Anda V and Baker BJ,  Genomes of six viruses that infect Asgard archaea from deep-sea sediments. Nat Microbiol 7, 953–961 (2022) [LINK] 

[6Langwig M, De Anda V+, Dombrowski N, Seitz K, Rambo  I,  Greening C,  Teske A,  and Baker BJ. Large-scale protein level comparison of Deltaproteobacteria reveals cohesive metabolic groups. ISME  Open Access [LINK] Editor's choice 

[5De Anda V, Chen Lin-Xing, Dombrowski N, Zheng-Shuang H, Hong-Chen J, Banfield Jill F, Li Wen-Ju, Baker BJ (2021). Brockarchaeota, a novel archaeal phylum with unique and versatile carbon cycling pathways. Nat Commun Open Access [LINK]

[4Hernandez L, Vicens A, Eguiarte L, Souza V, De Anda V, Gonzales JM (2020). Evolutionary history of dimethylsulfoniopropionate (DMSP) demethylation enzyme DmdA in marine bacteria. PeerJ Open Access [LINK]

[3Baker BJ, De Anda V, Seitz K W., Dombrowski N, Santoro AE and Lloyd KG. (2020). Diversity, ecology and evolution of Archaea. Nat Microbiol [LINK][PDF]

[2De Anda V, Zapata-Peñasco I, Blaz J, Poot-Hernández AC, Contreras-Moreira B, González-Laffitte M, Gámez-Tamariz N, Hernández- Rosales M, Eguiarte LE and Souza V (2018). Understanding the Mechanisms Behind the Response to Environmental Perturbation in Microbial Mats: A Metagenomic-Network Based Approach. Front. Microbiol. 9:2606.  doi: 10.3389/fmicb.2018.02606. Open Access [LINK]

[1] De Anda V*, Zapata-Peñasco I, Poot-Hernandez AC, Eguiarte LE, Contreras-Moreira B, Souza V. (2017) MEBS, a software platform to evaluate large (meta)genomic collections according to their metabolic machinery: unraveling the sulfur cycle. Gigascience;6(11):1-17. Open Access LINK]

Book Chapters

De Anda V, Zapata-Peñasco I., Eguiarte L.E., Souza V(2018) Towards a Comprehensive Understanding of Environmental Perturbations in Microbial Mats from the Cuatro Cienegas Basin by Network Inference. In: García-Oliva F., Elser J., Souza V. (eds) Ecosystem Ecology and Geochemistry of Cuatro Cienegas. Cuatro Ciénegas Basin: An Endangered Hyperdiverse Oasis. Springer, Cham [LINK] [PDF]

De Anda V, Zapata-Peñasco I., Eguiarte L.E., Souza V (2018) The Sulfur Cycle as the Gear of the “Clock of Life”: The Point of Convergence Between Geological and Genomic Data in the Cuatro Cienegas Basin. In: García-Oliva F., Elser J., Souza V. (eds) Ecosystem Ecology and Geochemistry of Cuatro Cienegas. Cuatro Ciénegas Basin: An Endangered Hyperdiverse Oasis. Springer, Cham [LINK][PDF]

Preprints

Langwig MV, De Anda V, et al. Metabolic capacity is maintained despite shifts in microbial diversity in estuary sediments,April 2023, PREPRINT (Version 1) available at Research Square [https://doi.org/10.21203/rs.3.rs-2838418/v1] [LINK]