생체분자·연성물질화학 연구실
Biomolecules · Polymers · Phase Transitions · Self-Organization · Functions
We investigate how molecular interactions drive phase transitions, self-organization, and collective behavior in soft matter and biomolecular systems. By combining physical chemistry, soft matter chemistry, and quantitative microscopy, we investigate how molecular-scale interactions give rise to emergent structures and functions . We aim to apply these principles to design new synthetic systems and understand how life functions.
Biomimetics to Chemistry.
Biophysics to Cells.
We are the B2C lab.
Did you know that there are protein-rich liquid droplets (sometimes, gels or solid aggregates), formed by phase transitions of biomolecules? They are known to organize other biomolecules in cells. Those droplets are called biomolecular condensates, a new class of cellular compartments.
In recent years, biomolecular condensation has emerged in various biological processes including gene regulation and cellular signaling. These condensates are proposed as a compelling mechanism for cells to organize and control biochemical reaction networks. However, mechanistic understanding of how their distinct physical properties and phase transition dynamics translate into biological functions remains largely unexplored.
Key questions:
How do molecular interactions drive biomolecular phase separation?
How do phase transition dynamics regulate biochemical reactions?
How do condensates organize molecules in space and time?
Our research is at the intersection of traditional physical chemistry and emerging biological questions. We translate principles learned from biological organization into synthetic systems. By controlling phase transitions, molecular interactions, and compartmentalization, we aim to create new materials and functional systems inspired by biology.
We use soft matter systems—including polyelectrolytes, peptides, and nucleic acids—to understand how molecular interactions generate collective structures and emergent properties. Coacervates provide a versatile model system for studying liquid-liquid phase separation, molecular partitioning, and compartmentalization.
Key questions:
Can complex and dynamic biological organization be recreated in synthetic systems?
How can molecular phase transitions be engineered?
Can self-organizing systems generate new functions?
We utilize coacervates—polymer-rich droplets formed via liquid-liquid phase separation (LLPS)—as an experimental model for biomolecular condensates. While coacervates are ubiquitous in everyday materials, from cosmetics and food to underwater adhesives and inks, our lab explores new compositions and functions of coacervate systems.
Moving beyond traditional synthetic polymers, we specialize in developing coacervates composed of polypeptides and oligonucleotides. Our research investigates how these droplets behave under diverse experimental conditions, with a particular focus on engineering them for advanced functionalities, such as the compartmentalization and storage of biomolecules.
We leverage quantitative fluorescence imaging, including single-molecule microscopy, to elucidate the phase transition nucleation mechanism. This approach provides an unexplored window into the dynamics of protein condensation during immune signaling, revealing stochastic nucleation behaviors that remain obscured in traditional ensemble measurements.
Beyond nucleation, our lab applies these quantitative tools to investigate the transport and partitioning of guest molecules within multiphasic coacervates. By bridging molecular-scale dynamics with macroscopic behavior, we aim to understand how biological systems harness phase transitions to spatially and temporally organize complex reaction networks.
We synthesize supported lipid bilayers (SLBs) as artificial membrane systems that can be precisely functionalized with a wide array of biomolecules. Our lab utilizes SLBs as a single-molecule level imaging platform to study how live cells interact with biological membranes in real-time. In addition to live cell imaging, we use SLBs to characterize the enzyme kinetics of membrane-bound or recruited proteins within a controlled environment. By mimicking the native cellular interface, our SLB platforms offer immense potential for developing next-generation biomolecular sensors, biocompatible coatings, and advanced bioanalytical tools.
The central idea is to discover new biology enabled by protein phase transition condensation in biological processes, such as RNA equilibria or signal transduction, and apply it to develop a new synthetic system.
Can specific molecular interactions tune phase transition dynamics and condensate properties in non-equilibrium condition?
How do different phase transition mechanisms relate to their roles in biology?
Can we develop a high-throughput platform for screening a wide range of conditions to study different phase transition mechanisms and dynamics?
We aim to uncover general principles governing molecular organization and phase transitions, and translate these principles into new soft materials and biomimetic systems. We will establish a novel framework for applying physical chemistry to living systems, addressing the emerging questions in biology.
Understand the fundamental principles of biomolecular organization
Develop high-throughput experimental platforms
Design novel platforms for molecular medicine
Translate our research into cosmetic applications