Embedded Files
The SWAN Project involves wide-spread collaboration and the work of the project is made possible due to partnership with multiple institutions and organisations. In addition, the project relies on the generous provision of open-source software and code from consortia and individual developers. We acknowledge the generous support of these partners here and are happy to promote their work. This does not imply that any of these partners specifically endorse the work of the SWAN Project. The SWAN Project is affiliated with the UWA Medical Physics Group (see website or blog).
Institutions & Individuals
Institutions & Individuals
The Australian Centre for Quantitative Imaging
University College London Hospitals
Dr Sarah Gulliford
Istituto Nazionale dei Tumori, Milan
Dr Tiziana Rancati
San Raffaele Scientific Institute, Milan
Dr Claudio Fiorino
Laboratoire Traitement du Signal et de l'Image, University of Rennes
Dr Oscar Acosta, Eugenia Mylona, Dr Renaud de Crevoisier
University of Sydney
Institute of Medical Physics
Prof Annette Haworth
University of Newcastle
Prof Jim Denham, Prof Peter Greer
Ingham Institutue, NSW
Dr Lois Holloway, Dr Michael Jameson, Mr Dale Roach
Trans-Tasman Radiation Oncology Group
CSIRO eHealth Research Centre
Dr Jason Dowling
University of Western Australia
Pawsey Supercomputing Centre
MRC Clinical Trials Unit, UCL
Dr Matt Sydes
The University of Wisconsin (Madison)
Prof Robert Jeraj
The University of Notre Dame (Fremantle)
Prof Max Bulsara
The Networks of Imaging eXcellence (NIX) Alliance
The National eResearch Collaboration Tools and Resources (Nectar) project
Institute for Cancer Research and Royal Marsden Hospital, UK
Prof David Dearnaley
Dr Emma Hall
Consortia & Developers
Consortia & Developers
Open-Source Software
Open-Source Software
Anaconda - https://www.anaconda.com
3D Slicer - https://www.slicer.org/
FMRIB Software Library (FSL) - https://fsl.fmrib.ox.ac.uk/fsl/fslwiki
ITK-SNAP - www.itksnap.org/
XNAT including DicomBrowser - https://www.xnat.org/; https://wiki.xnat.org/xnat-tools/dicombrowser
Fiji - https://imagej.net/software/fiji/
FreeSurfer - https://surfer.nmr.mgh.harvard.edu/
NeuroDesk - https://neurodesk.github.io/
Languages & Libraries
Languages & Libraries
ITK Segmentation & Registration Toolkit - https://itk.org/
SimpleITK - https://simpleitk.org/
Python - https://www.python.org/
Pyradiomics - https://www.radiomics.io/pyradiomics.html
Pytorch - https://pytorch.org/
Keras - https://keras.io/
OpenCV - https://opencv.org/
Scalismo - https://github.com/unibas-gravis/scalismo
dcm4chee - https://www.dcm4che.org/
Java - https://www.java.com/
Spring - https://spring.io/
MIRROR (Multimodal Image Registration using blOck-matching and Robust Regression) - https://github.com/aehrc/Mirorr
NiftyReg - https://www.nitrc.org/projects/niftyreg/
Additional Recommended Resources
Additional Recommended Resources
Open-source Informatics Tools for Radiotherapy Research - http://www.opensource4rt.info/
CERR: A Computational Environment for Radiotherapy Research - http://CERR.info
Dicompyler - http://code.google.com/p/dicompyler/
The SWAN Project supports all activities to promote FAIR and open access to research data - see https://www.force11.org/group/fairgroup/fairprinciples.
The SWAN Project supports all activities to promote FAIR and open access to research data - see https://www.force11.org/group/fairgroup/fairprinciples.
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