News at a Glance
Our lab is funded with the Start-up Research Grant (SRG)
On the occasion of Teacher's day, we also received an additional happy news.
SERB, Government of India has also technically approved our SRG proposal.
September 5, 2023
Gaurav Sharma has been inducted as an IAS Associate.
Honored to be inducted as an Associate of the Indian Academy of Sciences @IAScBng! It's an incredible honor to join this prestigious scientific community. I look forward to contributing to academy initiatives.
Thanks @IITHyderabad @BTIITH @omics_lab, for their constant support.
https://twitter.com/IITHyderabad/status/1697272862103539975
Aug 21, 2023
Gyanesh, Niharika, Shravani, and Jaimin: New PhD students
Four students joined our lab in the July 2023 session. They would work on diverse microbial genomics aspects.
Welcome to our lab, folks. May the DATA be with YOU.
July 14, 2023
Richa & Haneen's First paper has been accepted in "Frontiers in Plant Science".
Congratulations to Richa & Haneen (first authors) & Akash on publishing their first research paper in 'Frontiers in Plant Sciences'. Twitter post
Paper link: https://www.frontiersin.org/articles/10.3389/fpls.2023.1139215/full
Accepted: April 3, 2023
Welcome-2023.
Farewell-2022.
Year-end celebration with a few past/present @omics_lab folks located in Hyderabad. Till now, 23 wonderful people have worked with us & it feels great seeing them occasionally. We missed others; they might be getting hiccups.
Merry Christmas.
Happy New Year 2023!
Onwards & upwards!
December 25, 2022
Dr. Sharma has joined "IIT Hyderabad" as an Assistant professor.
Our lab is shifting to Hyderabad. Thank you, IBAB Bengaluru, for a great start.
September 29, 2022
AMI Young Scientist Award-2021
Gaurav Sharma has been awarded the "AMI Young Scientist Award-2021 (Environmental Microbiology)" by the Association of Microbiologists of India.
September 22, 2022
Welcoming Haneen
Haneen has joined our lab as the third Ph.D. student. She would work on medicinal plant metagenomics, understanding their associated microbiota, physiology, and secondary metabolite potential.
Good luck with everything, Haneen.
April 31, 2022
Welcoming Riya, AAqib, Shruti, Aayushi, and Arpita
Five IBAB students have joined our lab as dissertation students. They will work on diverse microbial genomics projects and learn new ways of computational biology.
Good luck with everything, folks.
January 1, 2022
Our paper has been accepted in "NATURE Biotechnology."
Our short correspondence on SARS-CoV-2 genomic surveillance is now out in Nature Biotechnology. Here, we identified the time lag from strain Collection to genome Submission at GISAID (CSTlag) for >1.7M SARS-CoV-2 strains.
Publication Link: https://www.nature.com/articles/s41587-021-01040-0
August 10, 2021
Welcoming Richa
Richa has joined our lab as the second Ph.D. student. She would work on medicinal plant genomics with a focus on understanding their physiology and secondary metabolites.
Welcome to our lab, Richa. Good luck.
January 4, 2021
Welcoming Utkarsha
Utkarsha has joined as the FIRST Ph.D. student in our lab. She would work with myxobacterial comparative genomics focused on their genome size and evolution.
Welcome to our lab, Utkarsha. Good luck.
March 8, 2021
Our work on the largest bacterial genome is now published in "BMC GENOMICS".
A part of my Ph.D. work has been now published. In this work, we sequenced, assembled, and annotated a 16.04 Mbp circular genome of Minicystis rosea DSM 24000T, the largest bacterial genome sequenced to date along with its genome characterization, and further emphasized the putative reasons for its genome expansion.
September 13, 2021
Welcome Niharika, Shruti, Kishan, & Kevin
Welcoming @official_ibab MSc students (Niharika, @ShruSinha, and @kalia_kishan) along with Kevin (an external student from Sardar Patel University, Anand, Gujarat). They will work on their dissertation projects with us @omics_lab for six months. I hope you will have a good learning experience.
May the DATA be with YOU.
January 7, 2021
Role of CglB protein in Myxobacterial adventurous gliding motility
Another fruitful multi-institutional collaboration work with @IslaMyxoLab @inrsciences & Tam Mignot @lcb_officiel is out in @biorxivpreprint. #Myxococcus
@ucdavis @ucdavisbiology @IndiaDST @omics_lab
Updated: July 22, 2020
SARS-CoV-2 Genomics: vARIANT aNALYSIS
Our work on 864 Indian SARS-CoV-2 genomes (distributed month-wise) is now available at bioRxiv where we have identified 30 variants showing contrasting mutational probabilities within a span of four months. We are suggesting that 25 of them are propagating with time whereas 5 are terminating.
Updated: July 14, 2020
Welcoming Animesh
Animesh joined as a Project Intern in our lab. He would be focused on Phage Genomic studies.
Welcome to our lab, Animesh. Good luck.
July 2, 2020
Our paper on SARS-CoV-2 Genomics: diversity & evolution is published in PeerJ
When the lockdown started in Late March, I started teaching the "Advanced Bioinformatics" course to @official_ibab MSc II semester students using recently sequenced SARS-CoV-2 genomes. Two months of teaching and extensive research work leads to this publication @thePeerJ. I am always enthusiastic for such "teaching-based Research" with students.
Publication link: https://peerj.com/articles/9576/
Accepted: July 1, 2020
BPS Paper is published in PLOS BIOLOGY.
Finally, the first collaborative project with @IslaMyxoLab, Tâm Mignot, and @EmiliaMauriello is out in @PLOSBiology. Here we have identified the functional and evolutionary aspects of a novel biosurfactant polysaccharide (BPS) in Myxococcus xanthus.
"Modulation of bacterial multicellularity via spatio-specific polysaccharide secretion" https://doi.org/10.1371/journal.pbio.3000728
June 10, 2020
Welcoming Sneha
Sneha joined as a Project Assistant jointly in our Lab, BioIT Centre, and Dr. Shruthi Vembar's Lab. In our lab, her focus would be on Microbial Genomics and Microbiome studies.
Welcome to our lab, Sneha. Good luck.
March 23, 2020
New Collaboration paper in MRA
Draft Genome Sequence of Marinobacter hydrocarbonoclasticus NCT7M, Obtained from the Microbiome of a Marine Copepod
Welcome Shradha
Shradha joined SharmaG_omics Lab as a Project intern. Welcome to our lab. She will learn the basic of genomics first followed by doing Myxobacterial genomics.
Feb 11, 2020
Welcome Drishti and Azra
Our IBAB M.Sc. students, Drishti and Azra, joined SharmaG_omics Lab to do their Master's dissertation. Welcome to our group, guys. We are looking forward to doing exciting work with you.
Drishti will be involved in Myxobacterial genomics whereas Azra will study Myxobacterial transcriptomics.
Jan 5, 2020
Publications during 2019
We wish you Happy New Year 2020. We have published four manuscripts (2 as first co-author and 2 as co-author) during 2019 in Genomics, Microbiol Resource Announcement, and BMC Microbiology journals.
Khatri I*, Sharma G*, Subramanian S. Composite genome sequence of Bacillus clausii, a probiotic commercially available as Enterogermina®, and insights into its probiotic properties. BMC Microbiol. 2019 Dec 30;19(1):307. doi: 10.1186/s12866-019-1680-7. PubMed PMID: 31888501. * Equal authorship
Parales RE, Sharma G, Zhang X, Subuyuj GA, Langner JT, Wright ME, Ditty JL, Dawson SC. Draft Genome Sequence of the Caffeine-Degrading Methylotroph Methylorubrum populi Pinkel. Microbiol Resour Announc. 2019 Nov 21;8(47). doi: 10.1128/MRA.01300-19. PubMed PMID: 31753954; PubMed Central PMCID: PMC6872896.
Nuttall R, Sharma G, Moisander PH. Draft Genome Sequence of Vibrio cyclitrophicus NCT10V, Cultivated from the Microbiome of a Marine Copepod. Microbiol Resour Announc. 2019 Oct 31;8(44). doi: 10.1128/MRA.01208-19. PubMed PMID: 31672750.
Whitfield DL*, Sharma G*, Smaldone GT, Singer M. Peripheral rods: a specialized developmental cell type in Myxococcus xanthus. Genomics. 2019 Oct 9;. doi: 10.1016/j.ygeno.2019.09.008. [Epub ahead of print] PubMed PMID: 31605730. * Equal authorship
Looking forward to a wonderful year ahead 2020.
May the Data be with you.
Welcome, Vaishnavi and Shenu
Vaishnavi and Shenu Joined our Lab as pioneer members. Special applause for them.
They will work as project assistants. We welcome both of you to our group.
Nov 1, 2019
I am very excited to have joined the Institute of Bioinformatics and Applied Biotechnology, Bengaluru, as a DST-INSPIRE Faculty. My lab will be focused on understanding diverse aspects of microbial genomics & plant microbiome.
My institutional Web page can be accessed from here.
https://www.ibab.ac.in/research/gaurav-sharma/
Aug 1, 2019
NEWS Till August 1, 2019
Awarded UCDavis PSA Travel Award — July 4, 2019
Attended EMBO Course: Bioinformatics & genome analyses — July 1, 2019
Awarded DST-INSPIRE FACULTY Award — Feb 2, 2019
Published first short Fiction story — jan 28, 2019
Attended West Coast Bacterial Physiologists — Dec 16, 2018
Attended ICMR-2019 in Pune, India — Nov 23, 2018
Second Corresponding Author Paper Accepted In BMC Genomics — Oct 19, 2018
Our manuscript accepted in 'Frontiers in Microbiology' — Jun 29, 2018
Collaborative work preprint in 'Cell' Journal — Jun 27, 2018
ASM Postdoctoral Travel Award — Jun 18, 2018
ASM Microbes 2018 in Atlanta, Georgia — Jun 18, 2018
Outstanding reviewer in 'Genomics Data' Journal — May 10, 2018
Recognized reviewer in 'Genomics Data' Journal — May 10, 2018
Recognized reviewer in 'Genomics' Journal — May 10, 2018
Selected for ASM Student and Postdoctoral Travel Award — Mar 28, 2018
Cover Page from my publication is out. — Jan 25, 2018
"Myxobacterial chemosensory systems" manuscript is now online — Nov 21, 2017
Cover page accepted in Journal of Bacteriology — Nov 10, 2017
Career Development workshop — Nov 8, 2017
Awarded Science Communication Fellowship — Nov 6, 2017
Poster presentation in "MicroBOOmes" — Oct 30, 2017
Chemosensory systems manuscript accepted in JBac — Oct 30, 2017
Myxo Meeting 2017 — Jun 21, 2017
Archangium manuscript is online now — Apr 7, 2017
Archangium manuscript accepted in GBE — Apr 4, 2017