*first author  #corresponding author

2025

SCI paper:

YE Hsieh, SY Yang, SL Liu, SW Wang, WL Wang, SL Tang, SH Yang#. 2025. Microbial Community Shifts and Nitrogen Utilization in Peritidal Microbialites: The Role of Salinity and pH in Microbially Induced Carbonate Precipitation. Microbial Ecology 88:31. (IF: 4.0; Q1 in Ecology; Q1 in Marine & Freshwater Biology)  

L Chiu, JL Guo, HW Li, HJ Chang, SH Yang, S Dufour, CF Chang, YG Tseng, GC Wu. 2025. Microbial Diversity and Pigment Synthesis in the Accessory Nidamental Gland: Species-Specific and Color-Associated Patterns in Bigfin Reef Squid. Animal Microbiome 7:36. (IF: 4.4; Q1 in Veterinary Sciences)

HT Lin, JI Yang, YT Wu, YJ Shiau, L Lo, SH Yang#. 2025. The spatiotemporal variations of marine nematode populations may serve as indicators of changes in marine ecosystems. Marine Pollution Bulletin 211:117373. (IF: 4.9; Q1 in Marine & Freshwater Biology)

JWM Wong, AC Liu, HT Lin, C Shinzato, SY Yang, SH Yang#. 2025. An improved RNA extraction method for octocorals and its application in transcriptome analysis of dark-induced bleaching octocoral. Marine Biotechnology 27:8. (IF: 2.8; Q1 in Marine & Freshwater Biology)

2024

SCI paper:

YE Hsieh, CY Lu, PY Liu, JM Kao, SY Yang, CY Wu, JWM Wong, S Shikina, TY Fan, SH Yang#. 2024. Successive responses of three coral holobiont components (coral hosts, symbiotic algae, and bacteria) to daily temperature fluctuations. Ecological Indicators, 158:111515. (IF: 7.4; Q1 in Environmental Sciences)

H Jayasinghe, HX Chang, S Knobloch, SH Yang, DPB Hendalage, KGSU Ariyawansa, PY Liu, M Stadler, HA Ariyawansa. 2024. Metagenomic insight to apprehend the fungal communities associated with leaf blight of Welsh onion in Taiwan. Frontiers in Plant Science 15:1352997. (IF: 4.8; Q1 in Plant Science)

2023

SCI paper:

PH Chou, M Hu, YJ Guh, GC Wu, SH Yang, K Tandon, YT Shao, LY Lin, C Chen, KY Tseng, MC Wang, CM Zhang, BC Han, CC Lin, SL Tang, MS Jeng, CF Chang, YC Tseng#. 2023. Cellular mechanisms underlying extraordinary sulfide tolerance in a crustacean holobiont from hydrothermal vents. Proceedings of the Royal Society B 290:20221973. (IF: 3.5; Q1 in Biology; Q1 in Ecology)

2022

SCI paper:

CW Wang, JWM Wong, SS Yeh, YE Hsieh, CH Tseng, SH Yang#, SL Tang#. 2022. Soil bacterial community may offer solutions for ginger cultivation. Microbiology Spectrum 10.1128/spectrum.01803-22. (IF: 3.8; Q2 in Microbiology)

L Chiu, MC Wang, KY Tseng, CL Wei, HT Lin, SH Yang#, YC Tseng#. 2022. Shallow-water hydrothermal vent system as an extreme proxy for discovery of microbiome significance in a crustacean holobiont. Frontiers in Marine Science 9:976255. (IF: 3.0; Q1 in Marine & Freshwater biology)

PY Liu, SY Yang, CY Lu, N Wada, S De Palmas, SS Yeh, H Yamashiro, SL Tang, SH Yang#. 2022. Ocean currents may influence the endolithic bacterial composition in coral skeletons. Frontiers in Marine Science 9:850984.(IF: 3.0; Q1 in Marine & Freshwater biology)

2021

SCI paper:

PY Liu, SH Yang, SY Yang. 2021. KTU: K-mer Taxonomic Units improve the biological relevance of amplicon sequence variant microbiota data. Methods in Ecology and Evolution 00:1-9. (IF: 6.2; Q1 in Ecology)

SH Yang*, C Chen, Y E Hsieh, SY Yang, HW Li, TY Ching, CH Wang, CF Chang, SL Tang, GC Wu. 2021. Bacterial dynamics in the accessory nidamental gland of Sepioteuthis lessoniana throughout maturation. Microbes and Environments 36: ME21030. (IF: 2.0; Q3 in Microbiology)

K Tandon, MT Wan, CC Yang, SH Yang, B Baatar, CY Chiu, JW Tsai, WC Liu, CS Ng, SL Tang. 2021. Aquatic microbial community is partially functionally redundant: insights from an in situ reciprocal transplant experiment. Science of the Total Environment 786:147433. (IF: 8.0; Q1 in Environmental Sciences)

YH Chen*, SH Yang*, K Tandon, CY Lu, HJ Chen, CJ Shih, SL Tang. 2021. Potential syntrophic relationship between coral-associated Prosthecochloris and its companion sulfate-reducing bacterium unveiled by genomic analysis. Microbial Genomics 7:000574. (IF: 4.0; Q1 in Genetics & Heredity)

Report:

SW Wang, YW Chiu, HD Huang, KS Lee, WL Wang, SL Liu, SH Yang. 2021. Notes on Freshwater coated grains of the Hengchun Peninsula. Collection and Research 33 : 29-40.

2020

SCI paper:

SY Yang, CY Lu, SL Tang, R Ramen Das, K Sakai, H Yamashiro, SH Yang#. 2020. Effects of Ocean Acidification on Coral Endolithic Bacterial Communities in Isopora palifera and Porites lobata. Frontiers in Marine Science 7:603293. (IF: 3.0; Q1 in Marine & Freshwater biology)

THT Hsu, L Carlu, YE Hsieh, TYA Lai, CW Wang, CY Huang, SH Yang, PL Wang, N Sturaro, V Denis. 2020. Stranger Things: Organismal Traits of Two Octocorals Associated With Singular Symbiodiniaceae in a High-Latitude Coral Community From Northern Taiwan. Frontiers in Marine Science 7:606601. (IF: 3.0; Q1 in Marine & Freshwater biology)

SH Yang*, CH Tseng*, HP Lo, PW Chiang, HJ Chen, JH Shiu, HC Lai, K Tandon, N Isomura, T Mezaki, H Yamamoto, SL Tang. 2020. Locality effect of coral-associated bacterial community in the Kuroshio Current from Taiwan to Japan. Frontiers in Ecology and Evolution 8:569107. (IF: 2.6; Q2 in Ecology)

K Tandon, CY Lu, PW Chiang, N Wada, SH Yang, YF Chan, PY Chen, HY Chang, YJ Chiou, MS Chou, WM Chen, SL Tang. 2020. Comparative genomics: Dominant coral-bacterium Endozoicomonas acroporae metabolizes dimethylsulfoniopropionate (DMSP). The ISME Journal 14:1290-1303. (IF: 10.0; Q1 in Microbiology; Q1 in Ecology)

2019

SCI paper

SH Yang*, K Tandon, CY Lu, N Wada, CJ Shih, SSY Hsiao, WN Jane, TC Lee, CM Yang, CT Liu, V Denis, YT Wu, LT Wang, L Huang, DC Lee, YW Wu, H Yamashiro, SL Tang. 2019. Metagenomic, phylogenetic and functional characterization of endolithic green sulfur bacteria in the coral, Isopora palifera. Microbiome 7:3. (IF: 12.7; Q1 in Microbiology)

Book chapter:

SH Yang*, SL Tang. 2019. Endolithic microbes in coral skeletons: algae or bacteria? In Zhiyong Li [eds.] Symbiotic Microbiomes of Coral Reef Sponges and Corals. Springer, Dordrecht, Netherlands. P43-53.

2018

SCI paper:

K Tandon*, SH Yang*, MT Wan, CC Yang, B Baatar, CY Chiu, JW Tsai, WC Liu, SL Tang. 2018. Bacterial community in water and air of two sub-alpine lakes in Taiwan. Microbes and Environments 33(2):120-126 (IF: 2.0; Q3 in Microbiology)

2017

SCI paper:

SH Yang*, CH Tseng*, CR Huang, CP Chen, STM Lee, PW Chiang, JH Shiu, CA Chen, SL Tang. 2017. Long term survey is necessary to reveal various shifts of microbial composition in corals. Frontiers in Microbiology 8:1094 (IF: 4.5; Q1 in Microbiology)

S Woo*, SH Yang*, HJ Chen, YF Tseng, SJ Hwang, S De Palmas, V Denis, Y Imahara, F Iwase, S Yum, SL Tang. 2017. Geographical variations in bacterial communities associated with soft coral Scleronephthya gracillimum. PLOS ONE 12(8): e0183663 (IF: 2.6; Q2 in Multidisciplinary Sciences)

2016

SCI paper:

SH Yang*, STM Lee, CR Huang, CH Tseng, PW Chiang, CP Chen, HJ Chen, SL Tang. 2016. Prevalence of potential nitrogen-fixing, green sulphur bacteria in the skeleton of reef-building coral Isopora palifera. Limnology and Oceanography 61(3): 1078-1086 (IF: 3.7; Q1 in Oceanography)

SH Yang*, PW Chiang, TC Hsu, SJ Kao, SL Tang. 2016. Bacterial community associated with organs of shallow hydrothermal vent crab Xenograpsus testudinatus near Kuishan Island, Taiwan. PLOS ONE 11(3): e0150597 (IF: 2.6; Q2 in Multidisciplinary Sciences)

2013

SCI paper:

R Kaewwichian, W Yongmanitchai, H Kawasaki, PH Wang, SH Yang, S Limtong. 2013. Yamadazyma siamensis sp. nov., Yamadazyma phyllophila sp. nov. and Yamadazyma paraphyllophila sp. nov., three novel yeast species isolated from phylloplane in Thailand and Taiwan. Antonie van Leeuwenhoek 103(4):777-788. (IF: 1.8; Q4 in Microbiology)

2008

SCI paper:

J Inácio*, MF Landell, P Valente, PH Wang, YT Wang, SH Yang, JS Manson, MA Lachance, CA Rosa, Á Fonseca. 2008. Farysizyma gen. nov., an anamorphic genus in the Ustilaginales to accommodate three novel epiphytic basidiomycetous yeast species from America, Europe and Asia. FEMS Yeast Research 1-10. (IF: 2.7; Q3 in Microbiology)

2006

SH Yang*, PH Wang. 2006. New record of Sporobolomyces carnicolor from Taiwan. Fungal Science 21(1,2): 29-33.

2003

SCI paper:

SH Yang*, Pi-Han Wang. 2003. Three Species of Yeasts New to Taiwan. Taiwania 48(2): 99-105. (IF: 1.0; Q3 in Plants Sciences)

楊姍樺。2021。該不會大家以為測qPCR跟驗孕的方式差不多快吧 ?。博客來OKAPI。

楊姍樺。2018。海雪中的塑膠微粒對海洋生態之影響。新興科技媒體中心（科技部）。

楊姍樺。2018。塑膠微粒與海洋微生物。Mitalkzine第二期。

楊姍樺、湯森林。2017。珊瑚的共伴微生物。國立海洋生物博物館館訊第88期。

馮加伶、楊姍樺。2016。小小兵立大功：看不見的土壤生物多樣性。環境資訊中心

楊姍樺、馮加伶。2015。珊瑚小心機：對抗氣候變遷的秘密。環境資訊中心。

馮加伶、楊姍樺。2015。沖刷入海的土壤，為何也成了地球暖化的幫兇？台達電子文教基金會。

馮加伶、楊姍樺。2015。海洋新物種世外桃源：菲律賓。環境資訊中心、104年度行政院農業委員會林務局林業管理計畫。