Publications

In the area of “COVID-19” 

1. Identification of bioactive molecules from Tea plant as SARS-CoV-2 main protease inhibitors. Vijay Kumar Bhardwaj, Rahul Singh, Jatin Sharma, Vidya Rajendran, Rituraj Purohit* and Sanjay Kumar

   Journal of biomolecular structure & dynamics. (2021) 39(10):3449-3458 (Link)    In the list of journal's ‘Most cited articles’   [Link]                                                        IF = 5.23

2. An in-silico evaluation of different bioactive molecules of Tea for their inhibition potency against non structural protein-15 of SARS-CoV-2. Jatin Sharma, Vijay Kumar Bhardwaj, Rahul Singh, Vidya Rajendran, Rituraj Purohit* and Sanjay Kumar

FoodChemistry.(2021) 346:128933 (Link)                                                                                                                                                                                                                          IF = 9.23 

3. Evaluation of acridinedione analogs as potential SARS-CoV-2 main protease inhibitors and their comparison with repurposed anti-viral drugs. Vijay Kumar Bhardwaj, Rahul Singh, Pralay Das and Rituraj Purohit* 

Computers in Biology and Medicine. doi; 10.1016/j.compbiomed.2020.104117 (Link)                                                                                                                                              IF = 6.69

4. Potential of turmeric-derived compounds against RNA‐dependent RNA polymerase of SARS‐CoV‐2: An in-silico Approach. Rahul Singh, Vijay Kumar Bhardwaj and Rituraj Purohit*

 Computers in Biology and Medicine (2021) 139: 104965 (Link)                                                                                                                                                                                          IF = 6.69

5. Bioactive molecules of Tea as potential inhibitors for RNA-dependent RNA polymerase of SARS-CoV-2. Vijay Kumar Bhardwaj, Rahul Singh, Jatin Sharma, Vidya Rajendran, Rituraj Purohit* and Sanjay Kumar

Frontiers in Medicine(2021) 8: 684020, doi; 10.3389/fmed.2021.684020 (Link)                                                                                                                                                               IF = 5.05

6. Identification of potential plant bioactives as SARS-CoV-2 Spike protein and human ACE2 fusion inhibitors. Rahul Singh, Vijay Kumar Bhardwaj, Dinesh Kumar, and Rituraj Purohit*

 Computers in Biology and Medicine.(2021) 136:104631 (Link)                                                                                                                                                                                            IF = 6.69

7. In-silico evaluation of bioactive compounds from tea as potential SARS-CoV-2 nonstructural protein 16 inhibitors. Rahul Singh, Vijay Kumar Bhardwaj, Jatin Sharma, Rituraj Purohit* and Sanjay Kumar

  Journal of Traditional and Complementary Medicine. (2022) 12(1): 35-38 (Link)                                                                                                                                            IF = 4.22

8. A computational approach for the rational discovery of inhibitors for non-structural protein 1 of SARS-CoV-2. Rahul Singh, Vijay Kumar Bhardwaj, Pralay Das, and Rituraj Purohit*

Computers in Biology and Medicine.(2021) 135:104555 (Link)                                                                                                                                                                                             IF = 6.69

    In the area of “Human Health”

1. Identification of 11β-HSD1 inhibitors through enhanced sampling methods. Rahul Singh, Vijay Kumar Bhardwaj, Pralay Das, and Rituraj Purohit*

   Chemical Communications (2022) 58: 5005-5008 (Link)                                                                                                                                                                                               IF = 6.06

2. Taming the ringmaster of the genome (PCNA): Phytomolecules for anticancer therapy against a potential non-oncogenic target. Vijay Kumar Bhardwaj and Rituraj Purohit*

  Journal of Molecular Liquids(2021) 337:116437 (Link)                                                                                                                                                                                                          IF = 6.63

3. Himalayan bioactive molecules as potential entry inhibitors for the human immunodeficiency virus. Vijay Kumar Bhardwaj, Rituraj Purohit*and Sanjay Kumar

  Food Chemistry. (2020) doi:10.1016/j.foodchem.2020.128932 (Link)                                                                                                                                                                               IF = 9.23 

4. Explicit-solvent molecular dynamics simulations revealed conformational regain and aggregation inhibition of I113T SOD1 by Himalayan bioactive molecules. Sachin Kumar, Vijay Kumar Bhardwaj, Rahul Singh and Rituraj Purohit*               

  Journal of Molecular Liquids (2021) doi:10.1016/j.molliq.2021.116798 (Link)                                                                                                                                                                 IF = 6.63

5. Structural based study to identify new potential inhibitors for Dual Specificity Tyrosine- Phosphorylation- Regulated Kinase. Vijay Kumar Bhardwaj, Rahul Singh, Jatin Sharma, Pralay Das and Rituraj Purohit*

  Computer Methods and Programs in Biomedicine. (2020) 194:105494 (Link)                                                                                                                                                              IF = 7.02 

6. Mechanistic behavior and subtle key events during DNA clamp opening and closing in T4 bacteriophage. Vijay Kumar Bhardwaj, Aaron Oakley and Rituraj Purohit*

   International Journal of Biological Macromolecules (2022) 208: 11-19 (Link)                                                                                                                                                            IF = 8.02

7. Target identification, screening and in vivo evaluation of pyrrolone-fused benzosuberene compounds against human epilepsy using Zebrafish model of pentylenetetrazol-induced seizures. Garima Tanwar, Arindam Ghosh Mazumder,Vijay Bhardwaj, Savita Kumari, Richa Bharti, Yamini, Damanpreet Singh, Pralay Das and Rituraj Purohit*

  Scientific Reports(2019) 9:7904 (Link)                                                                                                                                                                                                                    IF = 4.99

8. A new insight into protein-protein interactions and the effect of conformational alterations in PCNA. Vijay Kumar Bhardwaj and Rituraj Purohit*

  International Journal of Biological Macromolecules (2020) 148:999-1009 (Link)                                                                                                                                                        IF = 8.02

9. Use of long term Molecular Dynamics Simulation in predicting cancer associated SNPs. Ambuj Kumar and Rituraj Purohit*

  PLOS Computational Biology. 2014. 10(4): e1003318 (Link)                                                                                                                                                                                                  IF = 4.77

          In the area of “Plant Sciences”

1. Site-directed mutagenesis (P61G) of copper, zinc superoxide dismutase enhances its kinetic properties and tolerance to inactivation by H2O2. Sachin Kumar, Vijay Kumar Bhardwaj, Anish Kaachra, Shweta Guleria, Arun Kumar, Rituraj Purohit*, Sanjay Kumar*

  Plant Physiology and Biochemistry (2021) 168:221-229 (Link)                                                                                                                                                                                         IF = 5.43

2. New ecdysone receptor agonists: A computational approach for rational discovery of insecticide for crop protection. Rahul Singh, Vijay Kumar Bhardwaj, Pralay Das, and Rituraj Purohit*

  Molecular Systems Design & Engineering. (2021) doi;10.1039/D1ME00047K (Link)                                                                                                                                                IF = 4.92

3. Improving the catalytic efficiency and dimeric stability of Cu,Zn superoxide dismutases by combining structure-guided consensus approach with site-directed mutagenesis. Sachin Kumar, Vijay Kumar Bhardwaj, Shweta Guleria, Rituraj Purohit*, Sanjay Kumar*

  BBA-Bioenergetics (2021) doi; 10.1016/j.bbabio.2021.148505 (Link)                                                                                                                                                                                   IF = 4.42

4. Structural changes induced by substitution of amino acid 129 in the Coat protein of Cucumber mosaic virus. Vijay Kumar Bhardwaj and Rituraj Purohit*

 Genomics (2020) doi; 10.1016/j.ygeno.2020.04.023 (Link)                                                                                                                                                                                                        IF = 4.31

5. Plant-based analogues identified as potential inhibitor against Tobacco mosaic virus: A biosimulation approach. Jatin Sharma, Vijay Kumar Bhardwaj, Pralay Das, Rituraj Purohit*

  Pesticide Biochemistry and Physiology (2021) 175: 104858 (Link)                                                                                                                                                                                  IF = 4.96