E. Attree, X. Dai, B. Li, B. Griffiths, A. Anagnostopoulos, M. Barden, C. Bedford, M. Coffey, D. Werling, D. Xia, G. Oikonomou, G. Banos, A. Psifidi. 2025. "Multi-omics data integration towards sustainable bovine production, health and welfare: the case of painful foot lesions" PREPRINT (Version 1) available at Research Square [https://doi.org/10.21203/rs.3.rs-6000979/v1]. Under review in Nature Sustainability.
X. Dai, A.T. Hinsu, C. Dadousis, R.J. Pandit, M. Crotta, G. Limon, B. Fosso, M. Hay, J. Guitian, F.M. Tomley, P.G. Koringa, C.G. Joshi, D.P. Blake, A. Psifidi. 2025. "Divergent host genetic architectures drive breed-specific modulation of the caecal microbiome in chickens". PREPRINT (Version 1) available at Research Square [https://doi.org/10.21203/rs.3.rs-5953792/v1]. Under review in Microbiome.
A. Anagnostopoulos, M. Barden, L. Robinson, N. Siachos, A. Sato, K. Bao, E. Lamprou, A. Gillespie, A. Psifidi, G. Banos, G. Oikonomou. 2025. "A prospective cohort observational study investigating the association between the United Kingdom digital dermatitis genetic index and the disease prevalence in a population of Holstein heifers" J Dairy Sci. In press. doi:10.3168/jds.2025-26440
K. Ancheta, A. Psifidi, A.D. Yale, S. Le Calvez, J. Williams. 2025. "Deep-Learning Based Morphological Segmentation of Canine Diffuse Large B-cell Lymphoma" Front Vet Sci 12:1656976. doi:10.3389/fvets.2025.1656976
A. Peiravan, M. Salavati, A. Psifidi, M. Sharman, A. Kent, P. Watson, K. Allenspach, D. Werling. 2025. "Targeted next-generation sequencing of Candidate Regions Identified by GWAS Revealed SNPs Associated with IBD in GSDs" Front Vet Sci 12:1648911. doi:10.3389/fvets.2025.1648911
T. Liatis, E. Attree, L. Ruiz De Alejos Blanco, P. Santens, A. de Stefani, A. Psifidi. 2025. "Case Report: Phenotypic and genetic characterization of a presumptive sporadic hypothalamic hamartoma in a standard Schnauzer dog" Front Vet Sci 12:1591863. doi:10.3389/fvets.2025.1591863
D. Meunier, R. Corona-Torres, K. Boulton, Z. Wu, M. Ballantyne, L. Glendinning, A.A. Ahmad, D. Borowska, L. Taylor, L. Vervelde, J. del Pozo, M. Vasilogianni, J. Jaramillo-Ortiz, G. Sanchez-Arsuaga, A. Psifidi, F. Tomley, K. Watson, M.J. McGrew, M.P. Stevens, D.P. Blake, D.A. Hume. 2025. "Interleukin 10 controls the balance between tolerance, pathogen elimination and immunopathology in birds" eLife 14:RP106252. doi:10.7554/eLife.106252.1
G. Banos, M. Girma, B. Solomon, P. Davoudi, W. Esatu, T. Dessie, A. Psifidi, K. Watson, O. Hanotte, E. Sánchez-Molano. 2025. "Growth resilience to weather variation in commercial free-ranging chickens in Ethiopia" BMC Genomics 26:371. doi:10.1186/s12864-025-11561-6
E. Tarsani, B. Li, A. Anagnostopoulos, M. Barden, B.E. Griffiths, C. Bedford, M. Coffey, A. Psifidi, G. Oikonomou, G. Banos. 2025. "Genome-wide association studies of dairy cattle resistance to digital dermatitis recorded at four distinct lactation stages" Sci Rep 15:8922. doi:10.1038/s41598-025-92162-x
J. Raffle, J.N. Matos, P. Elliott, D.J. Connolly, V. Luis-Fuentes, A. Psifidi. 2025. "Identification of novel genetic variants associated with feline cardiomyopathy using targeted next-generation sequencing" Sci Rep 15:3871. doi:10.1038/s41598-025-87852-5
A. Hinsu, X. Dai, C. Dadousis, M. Hay, B. Fosso, M. Crotta, R. Pandit, J. Guitian, F. Tomley, P. Koringa, C. Joshi, D. Blake, A.Psifidi. 2025. "Unveiling host-genetic drivers of caecal microbial communities in chickens through Genome Wide Association Studies" Front Microbiomes 4:1539923. doi:10.3389/frmbi.2025.1539923
G.M. Pangga, B. Star-Shirko, A. Psifidi, D. Xia, N. Corcionivoschi, C. Kelly, C. Hughes, U. Lavery, A. Richmond, U.Z. Ijaz, O. Gundogdu. 2025. "Impact of commercial gut health interventions on caecal metagenome and broiler performance" Microbiome 13:30. doi:10.1186/s40168-024-02012-7
E. Attree, B. Griffiths, K. Panchal, D. Xia, D. Werling, G. Banos, G. Oikonomou, A. Psifidi. 2024. "Identification of DNA methylation markers for age and Bovine Respiratory Disease in dairy cattle: A pilot study based on Reduced Representation Bisulfite Sequencing" Commun Biol 7:1251. doi:10.1038/s42003-024-06925-9
W. Zhao, T. Shen, B. Zhao, M. Li, Z. Deng, Y. Huo, B. Aernouts, J.J. Loor, A. Psifidi, C. Xu. 2024. "Epigallocatechin-3-gallate protects bovine ruminal epithelial cells against lipopolysaccharide-induced inflammatory damage by activating autophagy" J Animal Sci Biotechnol 15(109). doi:10.1186/s40104-024-01066-9
V. Lindsay-McGee, C. Massey, Y.T. Li, E.L. Clark, A. Psifidi, R.J. Piercy. 2024. "Characterisation of phenotypic patterns in equine exercise-associated myopathies" Equine Vet J. doi:10.1111/evj.14128
B.E. Griffiths, M. Barden, A. Anagnostopoulos, J. Wilson, E. Lamprou, W. Tulley, C. Bedford, G. Banos, A. Psifidi and G. Oikonomou. 2024. "A prospective cohort study of factors associated with the digital cushion thickness in dairy cattle" J Dairy Sci. 107(9):7230–7244. doi:10.3168/jds.2023-24563
K.M. Morris, K. Sutton, M. Girma, E. Sanchez Molano, B. Solomon, W. Esatu, T. Dessie L. Vervelde, A.Psifidi, O. Hanotte, G. Banos. 2024. "Phenotypic and genomic characterisation of performance of tropically adapted chickens raised in smallholder farm conditions in Ethiopia" Front Genet 15. doi:10.3389/fgene.2024.1383609
A. Kathrani, I. Trewin, K. Ancheta, A. Psifidi, S. Lecalvez, J. Williams. 2024. "A transfer learning approach to intestinal image analysis differentiates treatment response in canine protein-losing enteropathy" Vet Sci 11(3):129. doi: 10.3390/vetsci11030129
A. Anagnostopoulos, M. Barden, B.E. Griffiths, C. Bedford, M. Winters, B. Li, M. Coffey, A. Psifidi, G. Banos, G. Oikonomou. 2024. "Association between a genetic index for digital dermatitis resistance and the presence of digital dermatitis, heel horn erosion and interdigital hyperplasia in Holstein cows" J Dairy Sci 107(7):4915-4925. doi: 10.3168/jds.2023-24136
J.M. Lawson, C.A. Shilton, V. Lindsay-McGee, A. Psifidi, D.C. Wathes, T. Raudsepp, A.M. de Mestre. 2024. "Does inbreeding contribute to pregnancy loss in Thoroughbred horses?" Equine Vet J 56(4):711-718. doi: 10.1111/evj.14057
M.C Hay, A.T. Hinsu, P.G. Koringa, R.J. Pandit, P. Liu, M.J. Parekh, S.J. Jakhesara, X. Dai, M. Crotta, B. Fosso, F.M. Tomley, D. Xia, A. Psifidi, C.G. Joshi, D.P. Blake. 2023. "Chicken caecal enterotypes in indigenous Kadaknath and commercial Cobb chicken lines in western India are associated with Campylobacter abundance and influenced by farming practices" Front Microbiomes 2. doi: 10.3389/frmbi.2023.1301609
M. Girma, K.M. Morris, K. Sutton, W. Esatu, B. Solomon, T. Dessie, A. Psifidi, L. Vervelde, O. Hanotte, G. Banos and D.P. Malatji. 2023. "Genomic markers associated with antibody response to Newcastle disease virus of Sasso chickens raised in Ethiopia" S Afr J Anim Sci 53(5):728-736. doi: 10.4314/sajas.v53i5.12
V. Lindsay-McGee, E. Sanchez-Molano, G. Banos, E.L. Clark, R.J. Piercy and A. Psifidi. 2023. "Genetic characterisation of the Connemara pony and the Warmblood horse using a within-breed clustering approach" Genet Sel Evol 55(1):60. doi: 10.1186/s12711-023-00827-w
B. Li, M. Barden, V. Kapsona, E. Sanchez-Molano, A. Anagnostopoulos, B.E. Griffiths, C. Bedford, X. Dai, M. Coffey, A. Psifidi, G. Oikonomou and G. Banos. 2023. "Single-step genome-wide association analyses of claw horn lesions in Holstein cattle using linear and threshold models" Genet Sel Evol 55(1):16. doi: 10.1186/s12711-023-00784-4
M. Barden, M.M. Phelan, R. Hyde, A. Anagnostopoulos, B.E. Griffiths, C. Bedford, M. Green, A. Psifidi, G. Banos and G. Oikonomou. 2023. "Serum (1)H nuclear magnetic resonance-based metabolomics of sole lesion development in Holstein cows" J Dairy Sci 106(4):2667-2684. doi: 10.3168/jds.2022-22681
M. Barden, A. Anagnostopoulos, B.E. Griffiths, B. Li, C. Bedford, C. Watson, A. Psifidi, G. Banos and G. Oikonomou. 2023. "Genetic parameters of sole lesion recovery in Holstein cows" J Dairy Sci 106(3):1874-1888. doi: 10.3168/jds.2022-22064
J. Zhang, R.M. Goto, A. Psifidi, M.P. Stevens, R.L. Taylor, Jr. and M.M. Miller. 2022. "Research Note: MHCY haplotype impacts Campylobacter jejuni colonization in a backcross [(Line 6(1) x Line N) x Line N] population" Poult Sci 101(3):101654. doi: 10.1016/j.psj.2021.101654
C. Watson, M. Barden, B.E. Griffiths, A. Anagnostopoulos, H.M. Higgins, C. Bedford, S. Carter, A. Psifidi, G. Banos and G. Oikonomou. 2022. "Prospective cohort study of the association between early lactation mastitis and the presence of sole ulcers in dairy cows" Vet Rec 190(10):e1387. doi: 10.1002/vetr.1387
M. Barden, B. Li, B.E. Griffiths, A. Anagnostopoulos, C. Bedford, A. Psifidi, G. Banos and G. Oikonomou. 2022. "Genetic parameters and genome-wide association study of digital cushion thickness in Holstein cows" J Dairy Sci 105(10):8237-8256. doi: 10.3168/jds.2022-22035
M. Barden, A. Anagnostopoulos, B.E. Griffiths, C. Bedford, M. Winters, B. Li, M. Coffey, A. Psifidi, G. Banos and G. Oikonomou. 2022. "Association between a genetic index for lameness resistance and the incidence of claw horn lesions in Holstein cows" Vet Rec 191(1):e1632. doi: 10.1002/vetr.1632
K.M. Russell, J. Smith, A. Bremner, C. Chintoan-Uta, L. Vervelde, A. Psifidi and M.P. Stevens. 2021. "Transcriptomic analysis of caecal tissue in inbred chicken lines that exhibit heritable differences in resistance to Campylobacter jejuni" BMC Genomics 22(1):411. doi: 10.1186/s12864-021-07748-2
B.L. Makepeace, A. Psifidi, D. Robledo and D. Xia. 2021. "Editorial: Genetics Architecture and Underlying Molecular Mechanisms in Host-Pathogen Interactions" Front Genet 12:695109. doi: 10.3389/fgene.2021.695109 (all authors have equally contributed)
A. Anagnostopoulos, M. Barden, J. Tulloch, K. Williams, B. Griffiths, C. Bedford, M. Rudd, A. Psifidi, G. Banos and G. Oikonomou. 2021. "A study on the use of thermal imaging as a diagnostic tool for the detection of digital dermatitis in dairy cattle" J Dairy Sci 104(9):10194-10202. doi: 10.3168/jds.2021-20178
L.A. Seeker, S.L. Underwood, R.V. Wilbourn, J. Dorrens, H. Froy, R. Holland, J.J. Ilska, A. Psifidi, A. Bagnall, B. Whitelaw, M. Coffey, G. Banos and D.H. Nussey. 2021. "Telomere attrition rates are associated with weather conditions and predict productive lifespan in dairy cattle" Sci Rep 11(1):5589. doi: 10.1038/s41598-021-84984-2
A. Psifidi, A. Kranis, L.M. Rothwell, A. Bremner, K. Russell, D. Robledo, S.J. Bush, M. Fife, P.M. Hocking, G. Banos, D.A. Hume, J. Kaufman, R.A. Bailey, S. Avendano, K.A. Watson, P. Kaiser and M.P. Stevens. 2021. "Quantitative trait loci and transcriptome signatures associated with avian heritable resistance to Campylobacter" Sci Rep 11(1):1623. doi: 10.1038/s41598-020-79005-7
A.L. Denyer, B. Catchpole, L.J. Davison and Canine Diabetes Genetics Partnership*. 2021. "Genetics of canine diabetes mellitus part 2: Current understanding and future directions" Vet J 270:105612. doi: 10.1016/j.tvjl.2021.105612 *I am a member of The Canine Diabetes Genetics Partnership
A.L. Denyer, B. Catchpole, L.J. Davison and Canine Diabetes Genetics Partnership*. 2021. "Genetics of canine diabetes mellitus part 1: Phenotypes of disease" Vet J 270:105611. doi: 10.1016/j.tvjl.2021.105611 *I am a member of The Canine Diabetes Genetics Partnership
C. Chintoan-Uta, T. Wisedchanwet, L. Glendinning, A. Bremner, A. Psifidi, L. Vervelde, K. Watson, M. Watson and M.P. Stevens. 2020. "Role of Cecal Microbiota in the Differential Resistance of Inbred Chicken Lines to Colonization by Campylobacter jejuni" Appl Environ Microbiol 86(7). doi: 10.1128/AEM.02607-19
G. Banos, V. Lindsay, T.T. Desta, J. Bettridge, E. Sanchez-Molano, A. Vallejo-Trujillo, O. Matika, T. Dessie, P. Wigley, R.M. Christley, P. Kaiser, O. Hanotte and A. Psifidi. 2020. "Integrating Genetic and Genomic Analyses of Combined Health Data Across Ecotypes to Improve Disease Resistance in Indigenous African Chickens" Front Genet 11:543890. doi: 10.3389/fgene.2020.543890
J.J. Ilska-Warner*, A. Psifidi*, L.A. Seeker, R.V. Wilbourn, S.L. Underwood, J. Fairlie, B. Whitelaw, D.H. Nussey, M.P. Coffey and G. Banos. 2019. "The Genetic Architecture of Bovine Telomere Length in Early Life and Association With Animal Fitness" Front Genet 10:1048. doi: 10.3389/fgene.2019.01048 (* equally contributed first authors)
A.T. Hinsu, R.J. Pandit, S.H. Patel, A. Psifidi, F.M. Tomley, S.K. Das, D.P. Blake and C.G. Joshi. 2019. "Genome reconstruction of a novel carbohydrate digesting bacterium from the chicken caecal microflora" Meta Gene 20:100543. doi: 10.1016/j.mgene.2019.01.002
L. Freem, K.M. Summers, A.A. Gheyas, A. Psifidi, K. Boulton, A. MacCallum, R. Harne, J. O'Dell, S.J. Bush and D.A. Hume. 2019. "Analysis of the Progeny of Sibling Matings Reveals Regulatory Variation Impacting the Transcriptome of Immune Cells in Commercial Chickens" Front Genet 10:1032. doi: 10.3389/fgene.2019.01032
G. Banos, E.L. Clark, S.J. Bush, P. Dutta, G. Bramis, G. Arsenos, D.A. Hume and A. Psifidi. 2019. "Genetic and genomic analyses underpin the feasibility of concomitant genetic improvement of milk yield and mastitis resistance in dairy sheep" PLoS One 14(11):e0214346. doi: 10.1371/journal.pone.0214346
L.A. Seeker, J.J. Ilska, A. Psifidi, R.V. Wilbourn, S.L. Underwood, J. Fairlie, R. Holland, H. Froy, E. Salvo-Chirnside, A. Bagnall, B. Whitelaw, M.P. Coffey, D.H. Nussey and G. Banos. 2018. "Bovine telomere dynamics and the association between telomere length and productive lifespan" Sci Rep 8(1):12748. doi: 10.1038/s41598-018-31185-z
L.A. Seeker, J.J. Ilska, A. Psifidi, R.V. Wilbourn, S.L. Underwood, J. Fairlie, R. Holland, H. Froy, A. Bagnall, B. Whitelaw, M. Coffey, D.H. Nussey and G. Banos. 2018. "Longitudinal changes in telomere length and associated genetic parameters in dairy cattle analysed using random regression models" PLoS One 13(2):e0192864. doi: 10.1371/journal.pone.0192864
A. Psifidi, K.M. Russell, O. Matika, E. Sanchez-Molano, P. Wigley, J.E. Fulton, M.P. Stevens and M.S. Fife. 2018. "The Genomic Architecture of Fowl Typhoid Resistance in Commercial Layers" Front Genet 9:519. doi: 10.3389/fgene.2018.00519
R.J. Pandit, A.T. Hinsu, S.H. Patel, S.J. Jakhesara, P.G. Koringa, F. Bruno, A. Psifidi, S.V. Shah and C.G. Joshi. 2018. "Microbiota composition, gene pool and its expression in Gir cattle (Bos indicus) rumen under different forage diets using metagenomic and metatranscriptomic approaches" Syst Appl Microbiol 41(4):374-385. doi: 10.1016/j.syapm.2018.02.002
R.J. Pandit, A.T. Hinsu, N.V. Patel, P.G. Koringa, S.J. Jakhesara, J.R. Thakkar, T.M. Shah, G. Limon, A. Psifidi, J. Guitian, D.A. Hume, F.M. Tomley, D.N. Rank, M. Raman, K.G. Tirumurugaan, D.P. Blake and C.G. Joshi. 2018. "Microbial diversity and community composition of caecal microbiota in commercial and indigenous Indian chickens determined using 16s rDNA amplicon sequencing" Microbiome 6(1):115. doi: 10.1186/s40168-018-0501-9
J. Ioannidis, E. Sanchez-Molano, A. Psifidi, F.X. Donadeu and G. Banos. 2018. "Association of plasma microRNA expression with age, genetic background and functional traits in dairy cattle" Sci Rep 8(1):12955. doi: 10.1038/s41598-018-31099-w
A.T. Hinsu, J.R. Thakkar, P.G. Koringa, V. Vrba, S.J. Jakhesara, A. Psifidi, J. Guitian, F.M. Tomley, D.N. Rank, M. Raman, C.G. Joshi and D.P. Blake. 2018. "Illumina Next Generation Sequencing for the Analysis of Eimeria Populations in Commercial Broilers and Indigenous Chickens" Front Vet Sci 5:176. doi: 10.3389/fvets.2018.00176
S.J. Bush, L. Freem, A.J. MacCallum, J. O'Dell, C. Wu, C. Afrasiabi, A. Psifidi, M.P. Stevens, J. Smith, K.M. Summers and D.A. Hume. 2018. "Combination of novel and public RNA-seq datasets to generate an mRNA expression atlas for the domestic chicken" BMC Genomics 19(1):594. doi: 10.1186/s12864-018-4972-7
K. Boulton, M.J. Nolan, Z. Wu, V. Riggio, O. Matika, K. Harman, P.M. Hocking, N. Bumstead, P. Hesketh, A. Archer, S.C. Bishop, P. Kaiser, F.M. Tomley, D.A. Hume, A.L. Smith, D.P. Blake and A. Psifidi. 2018. "Dissecting the Genomic Architecture of Resistance to Eimeria maxima Parasitism in the Chicken" Front Genet 9:528. doi: 10.3389/fgene.2018.00528
K. Boulton, M.J. Nolan, Z. Wu, A. Psifidi, V. Riggio, K. Harman, S.C. Bishop, P. Kaiser, M.S. Abrahamsen, R. Hawken, K.A. Watson, F.M. Tomley, D.P. Blake and D.A. Hume. 2018. "Phenotypic and genetic variation in the response of chickens to Eimeria tenella induced coccidiosis" Genet Sel Evol 50(1):63. doi: 10.1186/s12711-018-0433-7
J.M. Bettridge, A. Psifidi, Z.G. Terfa, T.T. Desta, M. Lozano-Jaramillo, T. Dessie, P. Kaiser, P. Wigley, O. Hanotte and R.M. Christley. 2018. "The role of local adaptation in sustainable village chicken production" Nat Sustain 1(10):574-582. doi: 10.1038/s41893-018-0150-9
R.A. Bailey, A. Kranis, A. Psifidi, K.A. Watson, L. Rothwell, P.M. Hocking, P. Kaiser, M.P. Stevens and S. Avendano. 2018. "Colonization of a commercial broiler line by Campylobacter is under limited genetic control and does not significantly impair performance or intestinal health" Poult Sci 97(12):4167-4176. doi: 10.3382/ps/pey295
R.A. Bailey, A. Kranis, A. Psifidi, K.A. Watson, L. Rothwell, P.M. Hocking, P. Kaiser, M.P. Stevens and S. Avendano. 2018. "Colonization of a commercial broiler line by Campylobacter is under limited genetic control and does not significantly impair performance or intestinal health" Poultry Science 97(12):4167-4176. doi: 10.3382/ps/pey295
D. Miltiadou, A.L. Hager-Theodorides, S. Symeou, C. Constantinou, A. Psifidi, G. Banos and O. Tzamaloukas. 2017. "Variants in the 3' untranslated region of the ovine acetyl-coenzyme A acyltransferase 2 gene are associated with dairy traits and exhibit differential allelic expression" J Dairy Sci 100(8):6285-6297. doi: 10.3168/jds.2016-12326
G. Banos, G. Bramis, S.J. Bush, E.L. Clark, M.E.B. McCulloch, J. Smith, G. Schulze, G. Arsenos, D.A. Hume and A. Psifidi. 2017. "The genomic architecture of mastitis resistance in dairy sheep" BMC Genomics 18(1):624. doi: 10.1186/s12864-017-3982-1
L.A. Seeker, R. Holland, S. Underwood, J. Fairlie, A. Psifidi, J.J. Ilska, A. Bagnall, B. Whitelaw, M. Coffey, G. Banos and D.H. Nussey. 2016. "Method Specific Calibration Corrects for DNA Extraction Method Effects on Relative Telomere Length Measurements by Quantitative PCR" PLoS One 11(10):e0164046. doi: 10.1371/journal.pone.0164046
A. Psifidi, M. Fife, J. Howell, O. Matika, P.M. van Diemen, R. Kuo, J. Smith, P.M. Hocking, N. Salmon, M.A. Jones, D.A. Hume, G. Banos, M.P. Stevens and P. Kaiser. 2016. "The genomic architecture of resistance to Campylobacter jejuni intestinal colonisation in chickens" BMC Genomics 17:293. doi: 10.1186/s12864-016-2612-7
A. Psifidi, G. Banos, O. Matika, T.T. Desta, J. Bettridge, D.A. Hume, T. Dessie, R. Christley, P. Wigley, O. Hanotte and P. Kaiser. 2016. "Genome-wide association studies of immune, disease and production traits in indigenous chicken ecotypes" Genet Sel Evol 48(1):74. doi: 10.1186/s12711-016-0252-7
A. Psifidi, C.I. Dovas, G. Bramis, T. Lazou, C.L. Russel, G. Arsenos and G. Banos. 2015. "Comparison of eleven methods for genomic DNA extraction suitable for large-scale whole-genome genotyping and long-term DNA banking using blood samples" PLoS One 10(1):e0115960. doi: 10.1371/journal.pone.0115960
A. Psifidi, C.I. Dovas, K. Eftimiou and G. Banos. 2013. "PRNP genotyping in dairy sheep flocks: A sampling strategy for application in breeding programmes for scrapie eradication" Small Ruminant Research 113(2):335-339. doi: 10.1016/j.smallrumres.2013.03.013
A.I. Gelasakis, G. Arsenos, J. Hickford, H. Zhou, A. Psifidi, G.E. Valergakis and G. Banos. 2013. "Polymorphism of the MHC-DQA2 gene in the Chios dairy sheep population and its association with footrot" Livestock Science 153(1):56-59. doi: 10.1016/j.livsci.2013.02.011
A. Psifidi, C. Dovas and G. Banos. 2011. "Novel quantitative real-time LCR for the sensitive detection of SNP frequencies in pooled DNA: method development, evaluation and application" PLoS One 6(1):e14560. doi: 10.1371/journal.pone.0014560
A. Psifidi, Z. Basdagianni, C.I. Dovas, G. Arsenos, E. Sinapis, M. Papanastassopoulou and G. Banos. 2011. "Characterization of the PRNP gene locus in Chios dairy sheep and its association with milk production and reproduction traits" Anim Genet 42(4):406-414. doi: 10.1111/j.1365-2052.2010.02159.x
A. Psifidi, C.I. Dovas and G. Banos. 2010. "A comparison of six methods for genomic DNA extraction suitable for PCR-based genotyping applications using ovine milk samples" Mol Cell Probes 24(2):93-98. doi: 10.1016/j.mcp.2009.11.001
V. Lindsay, A. Psifidi, R. Piercy (2021) “What is tying-up” Lay article in the magazine: Your Horse-published March 2021
A. Psifidi, Royal Veterinary College, UK. (2021) Chapter: “Genetics of Disease Resistance” in the book entitled: “Poultry Health A Guide for Professionals” Edited by Paul Barrow, Venugopal Nair, Susan Baigent, Robert Atterbury and Michael Clark published by CABY.
M.-H. Pinard-van der Laan, INRAE, France; J. Kaufman, University of Edinburgh and University of Cambridge, UK; A. Psifidi, Royal Veterinary College, UK; H. Zhou, University of California-Davis, USA; and M. Fife, Aviagen Ltd and The Pirbright Institute, UK (2020) Chapter: “Genetics and genomics of immunity and disease traits in poultry species”, in the book entitled : “Advances in poultry genetics and genomics” Ed. : S.E. Aggrey, H. Zhou, M. Tixier-Boichard, D.D. Rhoads Pub. : Burleigh Dodds series in agricultural science, Burleigh Dodds Science Publishing Limited, Cambridge, UK published by the Burleigh Dodds Science Publishing. https://shop.bdspublishing.com/store/bds/detail/workgroup/3-190-83999
X. Dai, D. Xia, B. E. Griffiths, A. Anagnostopoulos, M. Barden, B. Li, M. Coffey, D. Werling, G. Oikonomou, G. Banos, and A. Psifidi (2022)”Transcriptomic characterisation of claw horn disruption lesions in the peripheral blood leucocytes of dairy cattle”. Proceedings of the 12th World Congress on Genetics Applied to Livestock Production, (pp. 2301 - 2304) https://doi.org/10.3920/978-90-8686-940-4_555
X. Dai, A. T. Hinsu, C. Dadousis, R. J. Pandit, M. Crotta, G. Limon, B. Fosso, J. Guitian, F. M. Tomley, P. G. Koringa, C. G. Joshi, D. P. Blake and A. Psifidi (2022)“Genome-wide association studies of chicken caecal microbiota” Proceedings of 12th World Congress on Genetics Applied to Livestock Production (WCGALP) (pp. 2421-2424). https://doi.org/10.3920/978-90-8686-940-4_584
B. Li, M. Barden, V. Kapsona, E.S. Molano, A. Anagnostopoulos, B.E. Griffiths, C. Bedford, X. Dai, M. Coffey, A. Psifidi, G. Oikonomou, and G. Banos (2022)“Understanding the genetic architecture of claw horn lesions in different lactation stages in Holstein cattle”. Proceedings of the 12th World Congress on Genetics Applied to Livestock Production, pp 2782 - 2785 https://doi.org/10.3920/978-90-8686-940-4_674
K.M. Morris, K. Sutton, M. Girma, W. Esatu, B. Solomon, T. Dessie, L. Vervelde, A. Psifidi, O. Hanotte and G. Banos (2022) “Phenotypic characterisation of African chickens raised in semi scavenging conditions”. Proceedings of the 12th World Congress on Genetics Applied to Livestock Production, pp 1721 - 1724,https://doi.org/10.3920/978-90-8686-940-4_413
A. Psifidi, M. Crotta, RJ. Pandit, B. Fosso, PG. Koringa, G Limon, K. Boulton, G. Banos, J Guitian, FM. Tomley, DN. Rank, CG. Joshi, D. Hume, DP. Blake. 2018. “Identification of SNP markers affecting gut microbiome composition in chicken”. Proceedings of the 11th World Congress on Genetics Applied to Livestock Production, 11 (584) Auckland, New Zealand
J.J. Ilska*, A. Psifidi*, L.A. Seeker, B. Whitelaw, M. Coffey, D. Nussey, G. Banos. 2018. “Genetic background of early life telomere length and association with dairy cow longevity”. Proceedings of the 10th World Congress on Genetics Applied to Livestock Production, Auckland, New Zealand (* equally contributed first authors)
A. Psifidi, M. Fife, O. Matika, K. Boulton, G. Banos, D. Blake, DA. Hume, MP. Stevens, P. Kaiser. 2017. “Mapping disease resistance in poultry”. Invited speech, Proceedings of the 10th European Symposium of Poultry Genetics, 26th-28th June, St Malo, France
A. Psifidi, G. Bramis, G. Arsenos and G. Banos. 2014. “Genetic Parameters and Genomic Markers Associated with Mastitis Resistance in Dairy Sheep” Proceedings of the 10th World Congress on Genetics Applied to Livestock Production, Vancouver BC, Canada, 521 http://wcgalp.org/system/files/proceedings/2014/genetic-parameters-and-genomic-markers-associated-mastitis-resistance-dairy-sheep.pdf
A. Psifidi, G. Banos, O. Matika, T. Dessie, R. Christley, P. Wigley, J. Bettridge, O. Hanotte, T. Desta and P. Kaiser. 2014. “Identification of SNP Markers for Resistance to Salmonella and IBDV in Indigenous Ethiopian Chickens” Proceedings of the 10th World Congress on Genetics Applied to Livestock Production, Vancouver BC, Canada, 321. http://www.wcgalp.org/proceedings/2014/identification-snp-markers-resistance-salmonella-and-ibdv-indigenous-ethiopian
A. Psifidi, C.I. Dovas, G. Arsenos, M. Papanastassopoulou, Z. Basdagianni and G. Banos. 2010. “Detection and Quantification of PrP Alleles Based on Flock Bulk Milk of Dairy Ewes Using Gap-A Ligase Chain Reaction“. Proceedings of the 9th World Congress on Genetics Applied to Livestock Production, CD-ROM communication 0086. Leipzig, Germany. http://www.wcgalp.org/system/files/proceedings/2010/detection-and-quantification-prp-alleles-based-flock-bulk-milk-dairy-ewes-using-gap-anbsp-ligase.pdf
A.I. Gelasakis, G. Arsenos, J.G. Hickford, A. Psifidi, H. Zhou and G. Banos. 2010. “Polymorphism of the DQA2 gene in the Chios Dairy sheep population and its association with footrot“. Proceedings of the 9th World Congress on Genetics Applied to Livestock Production, CD-ROM communication 0631. Leipzig, Germany. http://wcgalp.org/system/files/proceedings/2010/polymorphism-dqa2-gene-chios-dairy-sheep-population-and-its-association-footrot.pdf