POKY®
A software suite for multidimensional NMR, 3D structure calculation of biomolecules and more!
The Modern Automated/Integrated Software Suite for NMR-based Studies and Computer-Aided Drug Design
The POKY suite (trademark #7,380,556) is a new integrated software suite providing automated and visualized platforms for various essential tasks such as resonance assignments, structure calculation, dynamics studies, computer-aided drug design and more! It is not only a significant advance in the research platform embracing and enhancing popular software packages but also a new software platform for convenient technology development. In the technology development platform, its new extensible and scalable features by scripting and batching will enable users to freely use the offered automated analysis templates and build their own library sets to keep up with the rapid pace of technology.
Since its launch in late 2021, over 11,689 users* in 102 countries have used the POKY software suite to advance their research and grow their business.
*downloads as of November 30, 2024.
POKY features
Integration
Popular software packages like PONDEROSA-C/S, SPARKY, open source PyMOL, I-PINE, Vina, etc are enhanced, improved and integrated into one software suite, POKY.
Modernization
The POKY Suite has been written in different computer languages and library kits from C++ with QT5 to Python 3 to achieve the modernization and the maximum efficiency.
Innovation
New scripting and batching capabilities open up a new way of research and technology development. For instance, deep neural network non-uniform sampling (DNN NUS) reconstruction is just a few clicks.
Parallelization
The POKY suite aims to adopt parallelism in NMR analysis and 3D structure calculation. We also provide computational resources for computing intensive jobs. You can submit a job and do your business without freezing your laptop.
Questions?
Contact poky.nmr@gmail.com to get more information on the project
Reference
Woonghee Lee*, Mehdi Rahimi, Yeongjoon Lee, Abigail Chiu.
POKY: a software suite for multidimensional NMR and 3D structure calculation of biomolecules.
Bioinformatics. Sep 15, 2021. 37(18):3041-3042. https://doi.org/10.1093/bioinformatics/btab180
Funding
National Science Foundation [DBI-2413041, DBI-2051595 and DBI-1902076]
University of Colorado Denver