Nanxi Lu, Alicia Sanchez-Gorostiaga, Mikhail Tikhonov, and Alvaro Sanchez. Cohesiveness in microbial community coalescence. BioRxiv (2018) doi: 10.1101/282723
Joshua Goldford*, Nanxi Lu*, Djordje Bajic, Sylvie Estrela, Mikhail Tikhonov, Alicia Sanchez-Gorostiaga, Daniel Segre, Pankaj Mehta, and Alvaro Sanchez. Emergent simplicity in microbial community assembly. BioRxiv (2017) doi: 10.1101/205831 [*Shared First Authorship]
James S. Griffin*, Nanxi Lu*, Naseer Sangwan, Angang Li, Melissa Dsouza, Andrew J. Stumpf, Tiffany Sevilla, Alessandro Culotti, Laura L. Keefer, John J. Kelly, Jack A. Gilbert, George F. Wells, and Aaron I. Packman. Microbial diversity in an intensively managed landscape is structured by landscape connectivity. FEMS Microbiology Ecology (2017), 93(10): 1-12. [*Shared First Authorship]
Xiaobao Li, Nanxi Lu, Hannah R. Brady, and Aaron I. Packman. Biomineralization strongly modulates the formation of Proteus mirabilis and Pseudomonas aeruginosa dual-species biofilms. FEMS Microbiology Ecology (2016), 92(12): 1-8.
Xiaobao Li, Nanxi Lu, Hannah R. Brady, and Aaron I. Packman. Ureolytic biomineralization reduces Proteus mirabilis biofilm susceptibility to ciprofloxacin. Antimicrobial Agents and Chemotherapy (2016), 60(5): 2993-3000.
Xiaobao Li, Jisun L. Song, Alessandro Culotti, Wei Zhang, David L. Chopp, Nanxi Lu, and Aaron I. Packman. Methods for Characterizing the Co-development of Biofilm and Habitat Heterogeneity. Journal of visualized experiments (2015): JoVE, 97.
Nanxi Lu, Arash Massoudieh, Xiaomeng Liang, Dehong Hu, Tamir Kamai, Timothy R. Ginn, Julie L. Zilles, and Thanh H. Nguyen. Swimming Motility Reduces Azotobacter vinelandii Deposition to Silica Surfaces. Journal of Environmental Quality, Special Section: Microbial Transport and Fate in the Subsurface (2015), 44(5): 1366-1375.
Nanxi Lu, Arash Massoudieh, Xiaomeng Liang, Tamir Kamai, Julie L. Zilles, Thanh H. Nguyen, and Timothy R. Ginn. A kinetic model of gene transfer via natural transformation for motile and non-motile bacteria. Environmental Science: Water Research & Technology (2015), 1: 363-374.
Xiaomeng Liang, Lin-Ching Chang, Arash Massoudieh, Nanxi Lu, and Thanh H. Nguyen. Quantitative Inference of Bacterial Motility Behavior. 2015 International Conference Publication on Computational Science and Computational Intelligence (CSCI): 368-373.
Arash Massoudieh, Nanxi Lu, Xiaomeng Liang, Thanh H. Nguyen, and Timothy R. Ginn. Bayesian process-identification in bacteria transport in porous media. Journal of Contaminant Hydrology (2013), 153: 78-91.
Nanxi Lu, Tara Bevard, Arash Massoudieh, Changyong Zhang, Alice C. Dohnalkova, Julie L. Zilles, and Thanh H. Nguyen. Flagella-mediated differences in deposition dynamics for Azotobacter vinelandii in porous media. Environmental Science & Technology (2013), 47(10): 5162-5170.
Nanxi Lu, Stephen E. Mylon, Rong Kong, Rohit Bhargava, Julie L. Zilles, and Thanh H. Nguyen. 2012. Interactions between dissolved natural organic matter and adsorbed DNA and their effect on natural transformation of Azotobacter vinelandii. Science of the Total Environment (2012), 426: 430-435.
Nanxi Lu, Julie L. Zilles, and Thanh H. Nguyen. Adsorption of extracellular chromosomal DNA and its effects on natural transformation of Azotobacter vinelandii. Applied and Environmental Microbiology (2010), 76(13): 4179-4184.