Publications and CV

List of publications:

Published/Submitted:

1. Colebank, MJ, Taylor, R, Hacker, T, Chesler, N “A computational analysis of biventricular interaction during acute left ventricular ischemia in mice.” (Accepted) Ann Biomed Eng; Preprint: https://doi.org/10.1101/2023.01.26.525736)

2. Lechuga, CG, Raza, F, Colebank, MJ, Chesler, NC, “Characteristic Impedance with Exercise Testing Correlated with Right Ventricular-Pulmonary Arterial Coupling in Isolated Post-Capillary Pulmonary Hypertension.” (Submitted) Am J Respir Cell Mol

3. Colunga†, AL, Colebank†, MJ, Schell, Olufsen, MS, “Parameter inference in a computational model of hemodynamics in pulmonary hypertension.” (2023, In Press), J R Soc Interface; † authors contributed equally; Preprint: https://arxiv.org/abs/2101.06266

4. Pewowaruk, RJ, Colebank, MJ, Spronck, B, Korcarz CE, Gepner, AD “Biomechanics Models Predict Increasing Smooth Muscle Tone as a Novel Therapeutic Target for Central Arterial Dysfunction in Hypertension” (2023, In Press) J Hypertens.

5. Colebank, MJ, Chelser, N, “An in-silico analysis of experimental designs to study ventricular function: A focus on the right ventricle.” PLoS Comput Biol, 18(9):e1010017 (2022). https://www.biorxiv.org/content/10.1101/2022.03.22.485347.full.pdf)

6. Taylor-LaPole, AM, Colebank, MJ, Weigand, JD, Olufsen, MS, Puelz, C, "A computational study of aortic reconstruction in single ventricle patients.” Biomech Model Mechanobiol (2022). https://doi.org/10.1007/s10237-022-01650-w 

7. Darquenne, C, Borojeni, AAT, Colebank, MJ, Forest, MG, Madas, BG, Tawhai, M, Jiang, Y. "Aerosol transport modeling: the key link between lung infections of individuals and populations." Front Physiol, 13:923945 (2022). https://www.frontiersin.org/articles/10.3389/fphys.2022.923945/)

8. Bartolo, M, Qureshi, MU, Colebank, MJ, Chesler, N, Olufsen, MS, “Numerical predictions of shear stress and cyclic stretch in pulmonary hypertension due to left heart failure”  Biomech Model Mechanobiol 21, 363–381 (2022). https://doi.org/10.1007/s10237-021-01538-1  

9. Colebank, MJ, Qureshi, MU, Rajagopal, S, Krasuski, R, Olufsen, MS, “A computational model of vascular function in chronic thromboembolic pulmonary hypertension.” Am J Physiol Heart Circ (2021) https://doi.org/10.1152/ajpheart.00086.2021

10. Paun LM, Colebank MJ, Olufsen MS, Hill NA, Husmeier D. Assessing model mismatch and model selection in a Bayesian uncertainty quantification analysis of a fluid-dynamics model of pulmonary blood circulation. J. R. Soc. Interface (2020) https://doi.org/10.1098/rsif.2020.0886

11. Chambers MJ, Colebank MJ, Qureshi MU, Clipp R, Olufsen MS. “Structural and hemodynamic properties of murine pulmonary arterial networks under hypoxia-induced pulmonary hypertension.” Proc. Inst. Mech. Eng. H July (2020) https://doi.org/10.1177/0954411920944110

12. Colebank, MJ, Paun, LM, Qureshi, MU, Chesler, N, Husmeier, D, Olufsen, MS, Fix, LE. “Influence of image segmentation on one-dimensional fluid dynamics predictions in the mouse pulmonary arteries.”  J. R. Soc. Interface (2019) http://doi.org/10.1098/rsif.2019.0284

13. Colebank, MJ, Qureshi, MU, Olufsen, MS. “Sensitivity analysis and uncertainty quantification of 1D models of pulmonary hemodynamics in mice under control and hypertensive conditions.” Int J Numer Meth Biomed Engng. (2019) https://doi.org/10.1002/cnm.3242

14. Qureshi MU, Colebank MJ, Paun M, Ellwein L, Chesler N, Haider MA, Hill NA, Husmeier D, Olufsen MS. “Hemodynamic assessment of pulmonary hypertension in mice: a model based analysis of the disease mechanism.” Biomech. Model. Mechanobiol. (2019). http://doi.org/10.1007/s10237-018-1078-8

15. Qureshi MU, Colebank MJ, Schreier DA, Tabima DM, Haider MA, Chesler NC, Olufsen MS. “Characteristic impedance: Frequency or time domain approach?” Physiol Meas (2018). http://doi.org/10.1088/1361-6579/aa9d60

16. Paun LM, Qureshi MU, Colebank MJ, Hill NA, Olufsen MS, Haider MA, Husmeier D. “MCMC methods for inference in a mathematical model of pulmonary circulation.” Stat Neerl (2018). http://doi.org/10.1111/stan.12132 

In preparation:

1. Colebank, MJ, Oomen, PA, Witzenburg, C, Beard, Dl, Olufsen, MS, Husmeier, D, and Chesler, NC. "Guidelines for in-silico cardiovascular analyses" (Invited review, Am J Physiol Heart Circ)

2. Borowska, A, Colebank, MJ, Chesler, NC, Olufsen, MS, Husmeier, D, “Evaluating closed-loop effects from vasodilator administration for pulmonary hypertension treatment”

3. Colebank, MJ, and Chesler, NC "Efficient surrogate modeling for pulmonary arteriovenous fluid dynamics"

4. Kachabi, A, Colebank, MJ, and Chesler NC. "Subject-Specific One-Dimensional Fluid Dynamics Model Of Chronic Thromboembolic Pulmonary Hypertension"

5. Paun, M, Colebank, MJ, Chesler, NC, Husmeier, D, "A comparison of surrogate models for forward and inverse problems in blood flow modeling"