Lipus, D., Jia, Z., Sondermann, M., Bussert, R., Bartholomäus, A., Yang, S., Wagner, D. and Kallmeyer, J., 2024. Microbial diversity and biogeochemical interactions in the seismically active and CO2-rich Eger Rift ecosystem. Environmental Microbiome, 19(1), p.113.
Nomosatryo, S., Lipus, D., Bartholomäus, A., Henny, C., Ridwansyah, I., Sujarta, P., Yang, S., Wagner, D. and Kallmeyer, J., 2024. The role of anthropogenic influences on a tropical lake ecosystem and its surrounding catchment: a case study of Lake Sentani. FEMS Microbiology Ecology, p.fiae162.
Lipus, D., Vikram, A., Ross, D., Bain, D., Gulliver, D., Hammack, R. and Bibby, K., (2017). Predominance and Metabolic Potential of Halanaerobium spp. in Produced Water from Hydraulically Fractured Marcellus Shale Wells. Applied and Environmental Microbiology, 83(8), pp.e02659-16
Lipus, D., Vikram, A.., Gulliver, D., and Bibby, K., (2019). Upregulation of peroxide scavenging enzymes and multidrug efflux proteins highlight an active sodium hypochlorite response in Pseudomonas fluorescens biofilms." Biofouling 35.3: 329-339.
Lipus, D., Vikram, A., Hammack, R., Bibby, K. and Gulliver, D., (2019). The effects of sample storage conditions on the microbial community composition in hydraulic fracturing produced water. Geomicrobiology Journal, 36(7), pp.630-638
Lipus, D., Vikram, A., Ross, D., Gulliver, D., Hammack, R., Khan, E., Roy, D., and Bibby, K. (2018). Microbial Communities in Bakken Region Produced Water. FEMS Microbiology Letters.
Lipus, D., Jia, Z., Bartholomäus, A., Burckhardt, O., Sondermann, M., Wagner, D. and Kallmeyer, J., (2022). Circular Metagenome-Assembled Genome of Methanobacterium sp. Strain ERen5, a Putative Methanogenic, H2-Utilizing Terrestrial Subsurface Archaeon. Microbiology Resource Announcements, 11(10), pp.e00676-22.
Horstmann, L., Lipus, D., Bartholomäus, A., Arens, F., Airo, A., Ganzert, L., Zamorano, P., Schulze-Makuch, D. & Wagner, D. (2024). Persistent Microbial Communities in Hyperarid Subsurface Habitats of the Atacama Desert: Insights from Intracellular DNA Analysis. PNAS Nexus. 3(4), p. 123
Jia, Z., Lipus, D., Burckhardt, O., Bussert, R., Sondermann, M., Bartholomäus, A., Wagner, D. and Kallmeyer, J., (2023). Enrichment of rare methanogenic Archaea shows their important ecological role in natural high-CO2 terrestrial subsurface environments. Frontiers in Microbiology, 14, p.1105259.
Mitzscherling, J., MacLean, J., Lipus, D., Bartholomäus, A., Mangelsdorf, K., Lipski, A., Roddatis, V., Liebner, S. and Wagner, D., (2022). Nocardioides alcanivorans sp. nov., a novel hexadecane-degrading species isolated from plastic waste. International Journal of Systematic and Evolutionary Microbiology, 72(4), p.005319.
Mitzscherling, J., MacLean, J., Lipus, D., Bartholomäus, A., Mangelsdorf, K., Lipski, A., Roddatis, V., Liebner, S. and Wagner, D., (2022). Paenalcaligenes niemegkensis sp. nov., a novel species of the family Alcaligenaceae isolated from plastic waste. International Journal of Systematic and Evolutionary Microbiology, 72(4), p.005333.
Oses Pedraza, R., Mitzscherling, J., Lipus, D., Wagner, D. and Bartholomäus, A., (2023). Genome Sequence of Arthrobacter sp. Strain ATA002, a Seed Endophytic Bacterium from the Atacama Desert. Microbiology Resource Announcements, 12(5), pp.e00027-23.
Ross, D.E., Lipus, D. and Gulliver, D., (2022). Predominance of Methanomicrobiales and diverse hydrocarbon‐degrading taxa in the Appalachian coalbed biosphere revealed through metagenomics and genome‐resolved metabolisms. Environmental Microbiology, 24(12), pp.5984-5997.
Tinker, K., Lipus, D., Gardiner, J., Stuckman, M. and Gulliver, D., (2022). The microbial community and functional potential in the Midland Basin reveal a community dominated by both thiosulfate and sulfate-reducing microorganisms. Microbiology spectrum, 10(4), pp.e00049-22.
Schulze-Makuch, D., Lipus, D., Arens, F.L., Baqué, M., Bornemann, T.L., de Vera, J.P., Flury, M., Frösler, J., Heinz, J., Hwang, Y. and Kounaves, S.P., (2021). Microbial hotspots in lithic microhabitats inferred from DNA fractionation and metagenomics in the Atacama Desert. Microorganisms, 9(5), p.1038.
Tinker, K., Gardiner, J., Lipus, D., Sarkar, P., Stuckman, M., & Gulliver, D. (2020). Geochemistry and Microbiology Predict Environmental Niches With Conditions Favoring Potential Microbial Activity in the Bakken Shale. Frontiers in microbiology, 11, 1781.
Gulliver, D., Lipus, D., Ross, D. and Bibby, K., (2018). Insights into microbial community structure and function from a shallow, simulated CO2 leakage aquifer demonstrate microbial selection and adaptation. Environmental Microbiology Reports.
Vikram, A., Lipus, D., and Bibby, K., (2016). Metatranscriptome Analysis of Active Microbial Communities in Produced Water Samples from the Marcellus Shale. Microbial Ecology, 72.3: 571-581
Vikram, A., Lipus, D., and Bibby, K. (2014). Produced Water Exposure Alters Bacterial Response to Biocides. Environmental Science & Technology, 48(21), 13001-13009.
Akyon, B., Lipus, D., and Bibby, K. (2019). Glutaraldehyde inhibits biological treatment of organic additives in hydraulic fracturing produced water. Science of the Total Environment, 666, 1161-1168.
Mohan, A. M., Bibby, K. J., Lipus, D., Hammack, R. W., and Gregory, K. B. (2014). The Functional Potential of Microbial Communities in Hydraulic Fracturing Source Water and Produced Water from Natural Gas Extraction Characterized by Metagenomic Sequencing. PloS one, 9(10), e107682
Lipus, D., Jia, Z., & Kallmeyer, J. (2024). Rar, aber relevant: die seltene Biosphäre im Hoch-CO2-Untergrund Egergraben. BIOspektrum, 30(5), 511-514.
Lipus, D., Jia, Z., Sondermann, M., Bussert, R., Bartholomaeus, A., Yang, S., Wagner, D. and Kallmeyer, J., (2022). Microbial diversity and community dynamics in an active, high CO2 subsurface rift ecosystem. BioRxiv, pp.2022-10.
Ross, D. E., Lipus, D., Gregory, K., and Gulliver, D. (2018). Comparative Metagenomics of Coalbed Methane Microbial Communities Reveals Biogenic Methane Potential in the Appalachian Basin. BioRxiv, 319590.
Tinker, K., Lipus, D., Sarkar, P., & Gulliver, D. (2020). The Geochemistry and Microbial Ecology of Produced Waters from Three Different Unconventional Oil and Gas Regions. Unconventional Resources Technology Conference (URTEC)
Lipus, D., Jia, Z.., Bartholomäus, A., Bussert, R., Liu, Q., Kallmeyer J., Wagner, D., CO2 degassing drives metabolic processes in the unique Eger rift subsurface microbiome, Annual Conference of the Association for General and Applied Microbiology VAAM, 2023, Göttingen, GER
Lipus, D., Jia, Z.., Bartholomäus, A., Bussert, R., Kallmeyer J., Mantel derived CO2 drives microbial life in the rare Eger Rift subsurface ecosystem, Federation of European Microbiological Societies FEMS Congress, 2023, Hamburg, GER
Lipus D., Jia, Z.., Bartholomäus, A., Bussert, R., Wagner D., Kallmeyer J., Analysis of CO2 driven microbial behavior and metabolic responses in the geologically active Eger Rift subsurface, Annual International Continental Drilling Program (ICDP) Colloquium, 2022, Potsdam, GER
Lipus, D., Liu, Q., Alawi, M., Gulliver, D., Tinker, K., Wagner, D., Kallmeyer J., Genomic explorations into the subsurface ecosystem of an active rift system highlight unique microbial processes, AGU Fall Meeting, 2019, San Francisco, CA
Lipus D., Genomic explorations into the terrestrial subsurface: Microbial metabolism and diversity in three unique belowground environments, Invited Talk, Iona College Science Colloquium, 2019, New Rochelle, NY
Lipus, D., Bibby, K., Gulliver, D., Vikram, A., Investigation of the Microbial Community Structure of Produced Waters from 42 Marcellus Shale Hydraulic Fracturing Wells, Gordon Research Seminar on Applied & Environmental Microbiology, 2017, South Hadley, MA
Lipus, D., Bibby, K., Gulliver, D., Microbiological Evaluation of Hydraulic Fracturing Produced Water From 17 Bakken Wells Across a 6 Month Time Frame, American Chemical Society, 253rd National Meeting, 2017, San Francisco, CA
Lipus, D., Gulliver, D., Vikram, A., Bibby, K., Predominance and Metabolic Potential of Halanaerobium in Marcellus Shale Hydraulic Fracturing Produced Water, American Chemical Society, 251st National Meeting, 2016, San Diego, CA
Lipus, D., Bibby, K., Vikram, A., October 2014, Characterization of Microbial Ecology of Hydraulic Fracturing Produced Water Using 16S rRNA Sequencing and Metagenomic Tools, International Symposium of Subsurface Microbiology, 2014, Pacific Grove, CA