2025
- L. Wang, S. Park, J.H. Choi, C.Y. Lee, K. Eom*, T. Kwon, "Molecular insight into cross-interaction between amyloid β isoforms and its effect in aggregation pathways, Journal of Biomolecular Structures and Dynamics, accepted for publication (2025)
2024
- E.S. Kang, N.H. Kim, H.-K. Lim, H. Jeon, K. Han, Y.H. No, K. Kim, Z.H. Khaleel, D. Shin, K. Eom, J. Nam, B.-S. Lee, H.-J. Kim, M. Suh, J. Lee, T.T. Thach, Y.H. Kim, "Structure-guided engineering of thermodynamically enhanced SaCas9 for improved gene suppression", Advanced Materials, 36, 2404680 (2024)
2023
- M. Bajaj, M. Muddassir, B. Choi, P. Singh, J.B. Park, S. Singh, R. Kumar, K. Eom*, D. Sharma, "Single-molecule analysis of osmolyte-mediated nanomechanical unfolding behavior of a protein domain", International Journal of Biological Macromolecules, 253, 126849 (2023).
- K Eom*, "Molecular dynamics simulation-based understanding of the structure and property of amyloid proteins at multiple length scales", JMST Advances, published online (2023).
- K. Eom*, "Surface elasticity-based modeling and simulation for dynamic and sensing performances of nanomechanical resonators", Advances in Nano Research, 14, 285-294 (2023).
2021
- B. Choi, N.H. Kim, G.Y. Jin, Y.S. Kim, Y.H. Kim, K. Eom*, "Sequence-dependent aggregation-prone conformations of islet amyloid polypeptide", Physical Chemistry Chemical Physics, 23, 22532-22542 (2021)
- L. Wang, K. Eom*, T. Kwon, "Different aggregation pathways and structures for Aβ40 and Aβ42 peptides", Biomolecules, 11, 198 (2021)
- K. Eom*, "Conformational changes of protein analyzed based on structural perturbation method", Multiscale Science and Engineering, 3, 62-66 (2021).
- Y. Jeon, K. Eom*, "Role of physique and physical fitness in the balance of Korean national snowboard athletes", Journal of Exercise Science & Fitness, 19, 1-7 (2021).
2020
- K. Eom*, "Effect of loading device in the mechanical force-driven biomolecular bond rupture mechanism", Multiscale Science and Engineering, 2, 252-256 (2020).
- K. Eom*, "Unfolding pathway of proteins predicted by elastic network model", Multiscale Science and Engineering, 2, 235-241 (2020).
- K. Eom*, "Computational simulations of nanomechanical resonators for understanding their frequency dynamics and sensing performances", Multiscale Science and Engineering, 2, 214-226 (2020).
- I. Park, J.W. Lim, S.H. Kim, S. Choi, K.H. Ko, M.G. Son, W.-J. Chang, Y.R. Yoon, S. Yang, J. Key, Y.S. Kim, K. Eom, R. Bashir, S.Y. Lee, S.W. Lee, "Variable membrane dielectric polarization characteristic in individual live cells", Journal of Physical Chemistry Letters, 11, 7197-7203 (2020).
- H.Y. Woo, B. Choi, K. Eom*, "Ligand-binding alters the mechanical stability of muscle protein titin domains", Journal of Biomolecular Structure & Dynamics, 38, 4938-4946 (2020).
2019
- L. Ma, K. Eom, J. Geringer, T.-S. Jun, K. Kim, "Literature review on fretting wear and contact mechanics of coated systems", Coatings, 9, 501 (2019)
- T. Kwon, S. Gunasekaran, K. Eom*, "Atomic force microscopy-based cancer diagnosis by detecting cancer-specific biomolecules and cells", BBA - Reviews on Cancer, 1871, 367-378 (2019)
- K. Eom*, "Computer simulation of protein materials at multiple length scales: from single proteins to protein assemblies", Multiscale Science and Engineering, 1, 1-25 (2019)
2018
- G. Lee, W. Lee, S. Baik, Y.H. Kim, K. Eom*, T. Kwon, "Correlation between the hierarchical structures and nanomechanical properties of amyloid fibrils", Nanotechnology, 29, 295701 (2018)
- M. Lee, J.I. Kim, S. Na, K. Eom*, "Metal ions affect the formation and stability of amyloid β aggregates at multiple length scales", Physical Chemistry Chemical Physics, 20, 8951-8961 (2018)
2017
- Y.H. No, N.H. Kim, B. Gnapareddy, B. Choi, Y.-T. Kim, S.R. Dugasani, O.-S. Lee, K.-H. Kim, Y.-S. Ko, S. Lee, S.W. Lee, S.H. Park, K. Eom*, Y.H. Kim, "Nature-inspired construction of two-dimensionally self-assembled peptide on pristine graphene", Journal of Physical Chemistry Letters, 8, 3734-3739 (2017)
- T. Choi, B.U. Hwang, B.Y. Kim, T.Q. Trung, Y.H. Nam, D.N. Kim, K. Eom, N.E. Lee, "Stretchable, transparent and stretch-unresponsive capacitive touch sensor array with selectively patterned silver nanowire/reduced graphene oxide electrode", ACS Applied Materials and Interface, 9, 18022-18030 (2017)
- M. Choi, K. Eom, K. Gwak, M.D. Dai, A. Olshevsky, C.-W. Kim, "Dynamical response of multi-walled carbon nanotube resonators based on continuum mechanics modeling for mass sensing applications", Journal of Mechanical Science and Technology, 31, 2385-2391 (2017)
- J.W. Choi, H. Lee, G. Lee, Y.R. Kim, M.-J. Ahn, H.J. Park, K. Eom*, T. Kwon, "Blood droplet-based cancer diagnosis via proteolytic activity measurement in cancer progression", Theranostics, 7, 2878-2887 (2017)
- B. Choi, T. Kim, E.S. Ahn, S.W. Lee, K. Eom*, "Mechanical deformation mechanisms and properties of prion fibrils probed by atomistic simulations", Nanoscale Research Letters, 12, 228 (2017)
2016
- K. Eom*, S. Kirmizialtin, Y. Liu, Z. Xu, "Editorial: Nanoscale Biological Materials", Journal of Nanomaterials, 2016, 5403560 (2016)
- B. Choi, T. Kim, S.W. Lee, K. Eom*, "Nanomechanical characterization of amyloid fibrils using single-molecule experiments and computational simulations", Journal of Nanomaterials, 2016, 5873695 (2016)
- C.W. Kim, M.D. Dai, K. Eom*, "Finite size effect on the dynamic and sensing performances of graphene resonators: the role of edge stress", Beilstein Journal of Nanotechnology, 7, 685-696 (2016)
- K. Kim, K. Eom, "Measurement and analysis of the kinetic friction coefficient of AISI 52100 and ceramic balls on cold-rolled high strength steel", International Journal of Surface Science and Engineering, 10, 353-364 (2016)
- I.S. Park, T.J. Kwak, G. Lee, M. Son, J.W. Choi, S. Choi, K. Nam, S.-Y. Lee, W.-J. Chang, K. Eom, D.S. Yoon, S. Lee, R. Bashir, S.W. Lee, "Biaxial dielectrophoretic force spectroscopy: a novel stoichiometric approach in defining intermolecular weak binding interactions", ACS Nano, 10, 4011-4019 (2016)
- J.I. Kim, K. Eom, S. Na, "Mechanical mass-spring model for understanding global motion of proteins", Journal of Mechanics, 32, 123-129 (2016)
- B. Choi, S.W. Lee, K. Eom*, "Nanomechanical behaviors and properties of amyloid fibrils", Multiscale and Multiphysics Mechanics, 1, 53-64 (2016)
2015
- G. Yoon, M. Lee, K. Kim, J.I. Kim, H.J. Chang, I. Baek, K. Eom*, S. Na, "Morphology and mechanical properties of multi-stranded amyloid fibrils probed by atomistic and coarse-grained simulations", Physical Biology, 12, 066021 (2015)
- G. Lee, W. Lee, H. Lee, C.Y. Lee, K. Eom*, T. Kwon, "Self-assembled amyloid fibrils with controllable conformational heterogeneity", Scientific Reports, 5, 16220 (2015)
- W. Tao, G. Yoon, P. Cao, K. Eom, H.S. Park, "β-sheet-like formation during the mechanical unfolding of prion protein", Journal of Chemical Physics, 143, 125101 (2015)
- T. Kwon, K.-S. Shin, M. Hyung, K. Eom*, T.S. Kim, "Fabrication of piezoelectric thick films for development of micromechanical cantilevers", Journal of Mechanical Science and Technology, 29, 3351-3356 (2015)
- P. Cao, G. Yoon, W. Tao, K. Eom, H.S. Park, "The role of binding site on the mechanical unfolding mechanism of ubiquitin", Scientific Reports, 5, 8757 (2015)
- B. Choi, G. Yoon, S.W. Lee, K. Eom*, "Mechanical deformation mechanisms and properties of amyloid fibrils", Physical Chemistry Chemical Physics, 17, 1379-1389 (2015)
2013
- K. Eom, K. Nam, H. Jung, P. Kim, M.S. Strano, J.-H. Han, T. Kwon, "Controllable viscoelastic behavior of vertically aligned carbon nanotube array", Carbon, 65, 305-314 (2013)
- T. Kwon, J. Park, G. Lee, K. Nam, Y.-M. Huh, S.W. Lee, J. Yang, C.Y. Lee, K. Eom, "Carbon nanotube-patterned surface-based recognition of carcinoembryonic antigens in tumor cells for cancer diagnosis", Journal of Physical Chemistry Letters, 4, 1126-1130 (2013)
- G. Yoon, Y.K. Kim, K. Eom*, S. Na, "Relationship between the disease-specific structures of amyloid fibrils and their mechanical properties", Applied Physics Letters, 102, 011914 (2013)
2012
- K. Jang, K. Eom, G. Lee, J.-H. Han, S. Haam, J. Yang, E. Kim, W.-J. Kim, T. Kwon, "Water-stable single-walled carbon nanotubes coated by pyrenyl polyethylene glycol for fluorescence imaging and photothermal therapy", Biochip Journal, 6, 396-403 (2012)
- G. Lee, H. Lee, K. Nam, J.-H. Han, J. Yang, S.W. Lee, D.S. Yoon, K. Eom, T. Kwon, "Nanomechanical characterization of chemical interaction between gold nanoparticle and chemical functional groups", Nanoscale Research Letters, 7, 608 (2012)
- I.S. Park, K. Eom, J.S. Son, W.-J. Chang, K. Park, T. Kwon, D.S. Yoon, R. Bashir, S.W. Lee, "Micro-fluidic multifunctional probe array dielectrophoretic force spectroscopy with wide loading rates", ACS Nano, 6, 8665-8673 (2012)
- K. Nam, K. Eom, J. Yang, J. Park, G. Lee, K. Jang, H. Lee, S.W. Lee, D.S. Yoon, C.Y. Lee, T. Kwon, "Aptamer-functionalized nano-pattern based on carbon nanotube for selective, sensitive protein detection", Journal of Materials Chemistry, 22, 23348-23356 (2012) [Co-first author]
- M.D. Dai, C.-W. Kim, K. Eom*, "Nonlinear vibration behavior of graphene resonators and their applications in sensitive mass detection", Nanoscale Research Letters, 7, 499 (2012)
- G. Lee, W. Lee, H. Lee, S.W. Lee, D.S. Yoon, K. Eom, T. Kwon, "Mapping the surface charge distribution of amyloid fibrils", Applied Physics Letters, 100, 043703 (2012)
- G. Yoon, S. Na, K. Eom*, "Loading device effect on protein unfolding mechanics", Journal of Chemical Physics, 137, 025102 (2012)
- M.D. Dai, K. Eom*, C.-W. Kim, "Erratum: nanomechanical mass detection using nonlinear oscillations", Applied Physics Letters, 100, 179901 (2012)
- G. Lee, K. Eom, J. Park, J. Yang, S. Haam, Y.-M. Huh, J.K Ryu, N.H. Kim, J.I. Yook, S.W. Lee, D.S. Yoon, T. Kwon, "Real-time quantitative monitoring of specific peptide cleavage by a proteinase for cancer diagnosis", Angewandte Chemie International Edition, 51, 5837-5841 (2012) [Co-first author]
- K. Eom, H. Jung, G. Lee, J. Park, K. Nam, S.W. Lee, D.S. Yoon, J. Yang, T. Kwon, "Nanomechanical actuation driven by light-induced DNA fuel", Chemical Communications, 48, 955-957 (2012)
2011
- K. Eom*, H. Jung, S. Jeong, C.H. Kim, D.S. Yoon, T. Kwon, "Nanomechanical motion of microcantilevers driven by ion-induced DNA conformational transitions", BioNanoScience, 1, 117-122 (2011)
- J. Park, J. Yang, G. Lee, C.Y. Lee, S. Na, S.W. Lee, S. Haam, Y.-M. Huh, D.S. Yoon, K. Eom*, T. Kwon, "Single-molecule recognition of biomolecular interaction via Kelvin probe force microscopy", ACS Nano, 5, 6981-6990 (2011)
- M.D. Dai, C.-W. Kim, K. Eom*, "Finite size effect on nanomechanical mass detection: the role of surface elasticity", Nanotechnology, 22, 265502 (2011)
- G. Yoon, J. Kwak, J.I. Kim, S. Na, K. Eom*, "Mechanical characterization of amyloid fibrils using coarse-grained normal mode analysis", Advanced Functional Materials, 21, 3454-3463 (2011)
- K. Eom*, H.S. Park, D.S. Yoon, T. Kwon, "Nanomechanical resonators and their applications in biological/chemical detection: nanomechanics principles", Physics Reports - A Review Section of Physics Letters, 503, 115-163 (2011)
- J.I. Kim, S. Na, K. Eom*, "Domain decomposition-based structural condensation of large protein structures for understanding their conformational dynamics", Journal of Computational Chemistry, 32, 161-169 (2011)
2010
- K. Eom, T.Y. Kwon, Y.-S. Sohn, "Nano and micro structures for label-free detection of biomolecules", Journal of Korean Sensors Society, 19, 403-420 (2010)
- Y.-S. Sohn, J. Park, G. Yoon, J. Song, S.-W. Jee, J.-H. Lee, S. Na, T. Kwon, K. Eom*, "Mechanical properties of silicon nanowires", Nanoscale Research Letters, 5, 211-216 (2010)
- K. Eom*, G. Yoon, J.I. Kim, S. Na, "Coarse-grained elastic models of protein structures for understanding their mechanics and dynamics", Journal of Computational and Theoretical Nanoscience, 7, 1210-1226 (2010)
2009
- H. Jang, S. Na, K. Eom*, "Multiscale network model for large protein dynamics", Journal of Chemical Physics, 131, 245106 (2009)
- M.D. Dai, K. Eom*, C.-W. Kim, "Nanomechanical mass detection using nonlinear oscillations", Applied Physics Letters, 95, 203104 (2009)
- K. Eom*, J. Yang, J. Park, G. Yoon, Y.-S. Sohn, S. Park, D.S. Yoon, S. Na, T. Kwon, "Experimental and computational characterization of biological liquid crystals: a review of single-molecule bioassay", International Journal of Molecular Sciences, 10, 4009-4032 (2009)
- T. Kwon, J. Park, J. Yang, D.S. Yoon, C.-W. Kim, S. Na, J.-S. Suh, Y.-M. Huh, S. Haam, K. Eom*, "Nanomechanical in situ monitoring of proteolysis of peptide by cathepsin B", PLoS ONE, 4, e6248 (2009)
- M. Zheng, K. Eom*, C. Ke, "Calculation of the resonant response of carbon nanotube to binding of DNA", Journal of Physics D: Applied Physics, 42, 145408 (2009)
- J.I. Kim, S. Na, K. Eom*, "Large protein dynamics described by hierarchical-component mode synthesis", Journal of Chemical Theory and Computation, 5, 1931-1939 (2009)
- J.I. Kim, H.-S. Jang, J.-H. Ahn, K. Eom*, S. Na, "A 3-D coarse-grained computational model for simulating large protein dynamics", CMC: Computers, Materials, and Continua, 9, 137-152 (2009)
- G. Yoon, H.-J. Park, S. Na, K. Eom*, "Mesoscopic model for mechanical characterization of biological protein materials", Journal of Computational Chemistry, 30, 873-880 (2009)
2008
- T. Kwon, K. Eom, J. Park, D.S. Yoon, H.L. Lee, T.S. Kim, "Micromechanical observation of the kinetics of biomoelcular interactions", Applied Physics Letters, 93, 173901 (2008) [Co-first author]
- J. Yang, K. Eom, E.-K. Lim, J. Park, Y. Kang, S. Na, E.K. Koh, J.-S. Suh, Y.-M. Huh, T.Y. Kwon, S. Haam, "In situ detection of live cancer cells by using bio-probes based on Au nanoparticles", Langmuir, 24, 12112-12115 (2008) [Co-first author]
- J.I. Kim, K. Eom*, M.K. Kwak, S. Na, "Application of component mode synthesis to protein structure for dynamic analysis", CMC: Computers, Materials, and Continua, 8, 67-73 (2008)
- K. Eom, J.-H. Ahn, J.-I. Kim, G.-C. Yoon, S. Na, "Modified mechanical mass-spring model of biomolecules for understanding dynamics of proteins", Journal of Mechanical Science and Technology, 22, 506-513 (2008)
- K. Eom*, T.Y. Kwon, D.S. Yoon, H.L. Lee, T.S. Kim, "Dynamical response of nanomechanical resonators to biomolecular interactions", Physical Review B: Condensed Matter and Materials Physics, 76, 113408 (2008)
2007
- K. Eom, J.-H. Ahn, S.-C. Baek, J.-I. Kim, S. Na, "Robust reduction method for biomolecules modeling", CMC: Computers, Materials, and Continua, 6, 35-42 (2007)
- T.Y. Kwon, K. Eom, J.H. Park, D.S. Yoon, H.L. Lee, T.S. Kim, "In situ real-time monitoring of biomolecular interactions based on resonating microcantilevers immersed in a viscous fluid", Applied Physics Letters, 90, 223903 (2007)
- K.S. Hwang, S.M. Lee, K. Eom, J.H. Lee, Y.-S. Lee, J.H. Park, D.S. Yoon, T.S. Kim, "Nanomechanical label-free detection of HCV helicase based on resonating microcantilevers functionalized by RNA aptamers as receptor molecules", Biosensors and Bioelectronics, 23, 459-465 (2007) [Co-first author]
- T.Y. Kwon, Y.B. Kim, K. Eom, D.S. Yoon, T.S. Kim, "Fabrication of stabilized piezoelectric thick film for silicon-based MEMS device", Applied Physics A: Materials Science and Processing, 88, 627-632 (2007)
- K. Eom*, S.-C. Baek, J.-H. Ahn, S. Na, "Coarse-graining of protein structures for the normal mode studies", Journal of Computational Chemistry, 28, 1400-1410 (2007)
- D.W. Chun, K.S. Hwang, K. Eom, J.H. Lee, B.H. Cha, W.Y. Lee, D.S. Yoon, T.S. Kim, "Detection of Au thin layer in the femto-gram per Hz regime based on nanomechanical microcantilevers", Sensors and Actuators A: Physical, 135, 857-862 (2007)
2006
- K.S. Hwang, K. Eom, J.H. Lee, D.W. Chun, B.H. Cha, D.S. Yoon, T.S. Kim, J.H. Park, "Dominant surface stress driven by biomolecular interactions in the dynamical response of nanomechanical microcantilevers", Applied Physics Letters, 89, 173905 (2006)
2003
- K. Eom, P.C. Li, D.E. Makarov, G.J. Rodin, "Relationship between the mechanical properties and topology of cross-linked polymer molecules: parallel strand maximizes the strength of model polymers and protein domains", Journal of Physical Chemistry B: Biological Chemistry, Biomaterials, Liquids, and Soft Matters, 107, 8730-8733 (2003)