Program

The YSN Imabio 3rd conference will articulate in 3 days, from Wednesday 6th to Friday 8th July, shifting theme every day!

The main Themes of this conference are:

1) Bioinformatics & Optics – image analysis, deep-learning methods, new microscopy techniques 

2) Photochemistry and labelling 

3) Career development - meet the industry & academics

4) Biology & Bioimaging – answers to biological questions thanks to the fluorescence imaging


Besides the scientific content, we focus on giving space to networking and socialization.  

The program will be updated progressively, following the selection of short talks and posters procedure.


Wednesday, July 6th 2022


12.00-13.00 Welcome from the ImaBio YSN and GDR ImaBio

13.00-14.15 Welcome Lunch

14.15  Opening word

14.30-15.30 Short talks, Session 1: Bioinformatics & Optics – image analysis, deep-learning methods, new microscopy techniques

Chairwoman: Justine Riti

14.30 Anita Mouttou - Enhanced Total Internal Reflection Fluorescence Microscopy using resonant dielectric multilayers

14.50 Clément Cabriel - High density single molecule localization using event-based sensors

15.10 Jiachuan Bai - ShareLoc – an open platform for sharing localization microscopy data

15.30-16.00 Coffee Break 

16.00-16.30 Short talks, Session 1: Bioinformatics & Optics – image analysis, deep-learning methods, new microscopy techniques

Chairman: Nathan Quiblier

16.00 Imane Lboukili - Automated keratinocytes identification on in vivo reflectance confocal microscopy images of the epidermis

16.20 Sonia Ouali - Depth-varying joint segmentation/deconvolution of vines’ wood in fluorescence microscopy

16.40 Ko Sugawara - ELEPHANT: tracking cell lineages in 3D+time by incremental deep learning

17.00-18.00 Key note lecture: 

Charles Kevrann (INRIA Rennes): Statistical and Artificial Intelligence Methods for Live-Cell Fluorescence Imaging

18.00-19.00 Poster session (with appetizer)

Thursday, July 7th 2022

09.30-10.30 Short talks, Session : Photochemistry and labelling 

Chairwoman: Hana Valenta

9.30 Toon Van Thillo - Characterization of fluorescent biosensor binding kinetics with biological nanopores

9.50 Corentin Rousset - New tools for multicolor dSTORM imaging

10.10 Anaïs Bourgès - Incomplete photochromism in fluorescent proteins: the first time is special

10.30-11.00 Coffee Break

11.00-12.15 Short talks, Session 2: Photochemistry and labelling

Chairman: Clément Cabriel

11.00 Franziska Bierbuesse - Absolute measurement of cellular activities using photochromic single-fluorophore biosensors

11.20 Hana Valenta - Separation of spectrally overlapping fluorophores using intra-exposure excitation modulation

11.40 Sponsor talk: Bioaxial - Applications of conical diffraction to super-resolution fluorescence microscopy

12.00      Sponsor talk: Abbelight

12.15-13.15 Key note lecture: 

Thomas Chaigne (Institut Fresnel): Photoacoustic imaging: towards functional, single-cell resolution imaging a couple millimeters deep

13.00-14.30 Lunch (Buffet)

14.30-16.00 Workshops, Session 3: PLATIM microscopy platform visit & Round Table Industry

16.30-17.00 Coffee Break

17.00-19.00 Workshops, Session 3: Start-up & Academia Round tables

19.00-20.00 Apéritif 


Friday, July 8th 2022


09.30-10.30 Short talks, Session 4: Biology – answers to biological questions thanks to the fluorescence imaging  

Chairwoman: Justine Riti

9.30 Franceline Juillard - 3D structure of latent herpes simplex virus 1 genomes by lattice-SIM2

9.50 Laura Breimann - Mechanism of transcription repression by an X-specific condensin in C. elegans

10.10 Valerio Laghi - Spying on viruses: direct in vivo observation and modelling of the propagation of a neurotropic virus in zebrafish larvae and the role of type I interferons

10.30-11.00 Coffee Break

11.00-12.00 Short talks, Session 4: Biology – answers to biological questions thanks to the fluorescence imaging  

Chairman: Valerio Laghi

11.00 Rayane Dibsy - Role of F-actin in HIV-1 assembly and release

11.20 Adrien Hamandjian - Rythmicity in fungal growth: a bi-sinusoidal signature on polarized cells

11.40 YSN & GDR Imabio talk

12.00-13.00 Key note lecture: 

Yad Ghavi-Helm (ENS Lyon): Regulating gene expression in 3D during embryonic development

13.00-13.20 Research infrastructure: Euro-BioImaging 

13.20-14.30 Oral presentation & Poster Awards, Closing Remarks, packed lunch