/aɪ/ /ɡiːk/

Welcome to iGEAK (Interactive Gene Expression Analysis Kit for Microarray & RNA-seq Data) !!

iGEAK is an R (v3.3.2) and JavaScript-based open-source desktop application using Shiny platform.

iGEAK supports the following 64-bit operating systems (English version):

• Windows (7-10)
• Mac OSX (10.5-10.13)
• Linux (Ubuntu 13-18 LTS)

iGEAK provides a hassle-free and interactive user experience in gene expression data analysis and exploration.

iGEAK is pre-loaded with required packages and data, so the user-side installation is not required. Just download your zip file, unzip it unto your desktop or memory stick. Now you are ready to go.

iGEAK currently supports human and mouse data.

You can easily

• perform differential gene expression prediction
• generate sample correlation plots (PCA, Pearson's Correlation Plot)
• perform ANOVA (and Tukey's test) and Kruskal-Wallis (and U-test) for multiple group comparisons
• create and trim gene expression heatmap
• generate protein-protein interaction network
• perform gene set enrichment analysis (ORA and GSEA)

You can ask questions and share your idea to improve iGEAK via iGEAK User Group: https://groups.google.com/forum/#!forum/igeak

Enjoy !