Publications 

106. Optical Discrimination of Terpenes in Citrus Peels with a Host:Guest Sensing Array

 Chen, J.; Moreno, Jr., J. L.; Zhang, W.; Gibson-Elias, L. J.; Lian, R.; Najafi, S.; Zhang, H.; Zhong, W.; Hooley, R.J.

Chem Commun. 2024

DOI: 10.1039/D4CC01309C

105. Investigation of the effects on proton relaxation times upon encapsulation in a water-soluble synthetic receptor

 Chaudhary, K. N.; Brosnahan, K. I., Gibson-Elias, L. J.; Moreno, J. L. Jr.; HD, B. L.; Hooley, R. J.; Caulkins, B. G.

PCCP. 2024

DOI: 10.1039/d3cp06099c. 

104. Selective Recognition and Discrimination of Single Isomeric Changes in Peptide Strands with a Host:Guest Sensing Array

 Chen, J.; Fasihianifard, P.; Raz, A. A. P.; Hickey, B. L.; Moreno, J. L. Jr.; Chang, C. A.; Hooley, R. J.; Zhong, W.

Chem. Sci. 2024

DOI: 10.1039/D3SC06087J

103. Using Flipped Classroom Modules to Facilitate Higher Order Learning in Undergraduate Organic Chemistry

 Holloway, L. R.; Miller, T. F.; da Camara B.; HD, B. L.; Lopez, A. L.; Ahn, J.; Dao, E.; Naibert, N; Barbera, J.; Hooley, R. J.; Eichler, J. F.

J. Chem. Educ. 2024, 101, 2, 490-500

DOI: 10.1021/acs.jchemed.3c00907

102. Catalytic Inhibition of Base-Mediated Reactivity by a Self-Assembled Metal-Ligand Host

 da Camara, B.; Woods, C. Z.; Sharma, K.; Wu, H.-T.; Farooqi, N. S.; Chen, C.; Julian, R. R.; Vander Griend, D. A.; Hooley, R.J.

Chem-Eur. J.. 2023

DOI: e202302499

101. Selective Molecular Recognition and Indicator Displacement Sensing of Neurotransmitters in Cellular Environments

 Chen, J.; Tabaie, E. Z.; Hickey, B. L.; Gao, Z.; Raz, A. A. P.; Li, Z.; Wilson, E. H.; Hooley, R. J.; Zhong, W.

ACS Sens. 2023

DOI: 10.1021/acssensors.3c00886

100. Selective Anion Sensing in High Salt Water via a Remote Indicator Displacement Assay

Hickey, B. L.; Raz, A. A. P.; Chen, J.; Moreno J. L. Jr.; Hartman, J. D.; Zhong, W.; Hooley, R. J.

Chem. Commun. 2023, 59, 7819-7822

DOI: 10.1039/D3CC01974H

99. Gated, Selective Anion Exchange in Functionalized Self-Assembled Cage Complexes 

da Camara, B.; Bar Ziv, N.; Carta, V.; Mota Orozco, G. A.; Wu, H.-T.; Julian, R. R.; Hooley, R.J. 

Chem-Eur. J. 2023

DOI: 10.1002/chem.202203588

98. Sensing Base Modifications in Non-Canonically Folded DNA with an Optimized Host:Guest Sensing Array

Chen, J.; Hickey, B.L.; Raz, A. A. P.; Gao, Z.; Hooley, R.J.*; Zhong, W

ACS Sens. 2022, 7, 2164–2169

DOI: 10.1021/acssensors.2c00839

97. Modifying the Internal Substituents of Self-Assembled Cages Controls their Molecular Recognition and Optical Properties

Woods, C. Z.; Wu, H.-T.; Ngai, C.; da Camara, B.; Julian, R. R.; Hooley, R.J.

Dalton Trans. 2022 51, 10920–10929.

DOI: 10.1039/d2dt01451c

96. Applications of Synthetic Receptors in Bioanalysis and Drug Transport

Hooley, R. J.; Zhong W.

Bioconj. Chem. 2022  

DOI: 10.1021/acs.bioconjchem.2c00096

95. “Combining Excellent Selectivity with Broad Target Scope: Biosensing with Arrayed Deep Cavitand Hosts” 

Chen, J.; Hooley, R. J.; Zhong W.

Acc. Chem. Res. 2022, 55, 1035-1046.

DOI: 10.1021/acs.accounts.2c00026

94. Moderated Basicity of Endohedral Amine Groups in an Octa-Cationic Self-Assembled Cage

Ngai, C.; Wu, H.-T.; da Camara, B.; Williams, C. G.; Mueller, L. J.; Julian, R. R.; Hooley, R. J. 

Angew. Chem. Int. Ed. 2022, 61, e202117011. 

DOI: 10.1002/anie.202117011 

93. Imaging active site chemistry and protonation states: NMR crystallography of the tryptophan synthase α-aminoacrylate intermediate 

Holmes, J. B.; Liu, V.; Caulkins, B. G.; Hilario, E.; Ghosh, R. K.; Drago, V. N.; Young, R. P.; Romero, J.; Gill, A. D.; Bogie, P. M.; Paulino, P.; Wang, X.; Riviere, G.; Bosken, Y. K.; Struppe, J.; Hassan, A.; Guidoulianov, J.; Perrone, B.; Mentink-Vigier, F.; Chang, C. A.; Long, J. R.; Hooley, R.J.; Mueser, T. C.; Dunn, M. F.; Mueller, L. J. 

Proc. Natl. Acad. Sci., U.S.A. 2022, 119, e2109235119.

DOI: 10.1073/pnas.2109235119

92. Enantioselective Sensing of Insect Pheromones in Water 

Chen, J.; Gill, A. D.; Hickey, B.L.; Gao, Z.; Cui, X.; E.; Hooley, R.J.; Zhong, W.

Chem. Commun. 2021, 57, 13341–13344.

DOI: 10.1039/D1CC05540B

91. Size and Shape-Selective Catalysis with a Functionalized Self-Assembled Cage Host 

Ngai, C.; da Camara, B.; Woods, C. Z.

J. Org. Chem. 2021, 86, 12862–12871. 

DOI: 10.1021/acs.joc.1c01511

90. Machine Learning Aids Classification and Discrimination of Noncanonical DNA Folding Motifs by an Arrayed Host:Guest Sensing System

Chen, J.; Gill, A. D.; Hickey, B.L.; Gao, Z.; Cui, X.; E.; Hooley, R.J.; Zhong, W.

J. Am. Chem. Soc. 2021, 32, 12791-12799.

DOI: 10.1021/jacs.1c06031

89. Selective Discrimination and Classification of G-Quadruplex Structures with a Host:Guest Sensing Array

Chen, J.; Hickey, B.L.; Wang, L.; Lee, J.; Gill, A.D.; Favero, A.; Pinalli, R.; Dalcanale, E.; Hooley, R.J.; Zhong, W.

Nat. Chem. 2021, 13, 488-495.

DOI: 10.1038/s41557-021-00647-9

88. Bridging Photochemistry and Photomechanics with NMR Crystallography: the Molecular Basis for the Macroscopic Expansion of an Anthracene Ester Nanorod 

Chalek, K. R.; Dong, X.; Tong, F.; Kudla, R. A.; Zhu, L.; Gill, A. D.; Xu, W.; Yang, C.; Hartman, J. D.; Magalhães, A.; Al-Kaysi, R.; Hayward, R.; Hooley, R.J.; Beran, G.J.O.; Bardeen, C.J.; Mueller, L.J. 

Chem. Sci. 2021, 12, 453-463.

DOI: 10.1039/D0SC05118G

87. Selective, Cofactor-mediated Catalytic Oxidation of Alkanethiols in a Self-Assembled Cage Host

da Camara, B.; Dietz, P. D.; Chalek, K. R.; Mueller, L. J.; Hooley R. J.

Chem. Commun. 2020 56, 14263-14266.

DOI: 10.1039/D0CC05765G

86. Supramolecular Catalysis of the oxa-Pictet-Spengler Reaction with an Endohedrally Functionalized Self-Assembled Cage Complex

Ngai, C.; Sanchez-Marsetti, C. S.; Harman, W. H.; Hooley R. J.

Angew. Chem. Int. Ed. 2020 59, 23505-23509.

DOI: 10.1002/anie.202009553

84. Selective Sensing of THC and Related Metabolites in Biofluids by Host:Guest Arrays

 Gill, A.D.; Hickey, B.L.; Zhong, W.; Hooley, R.J

Chem. Commun. 2020, 56, 4352 - 4355.

DOI: 10.1039/D0CC01489C

83. Macrocycles for Recognition and Sensing of Histone Modifications

Hooley R. J.

Supramolecular Protein Chemistry, Crowley, P. B. ed., Royal Society of Chemistry, 2020.

81. Heterogeneous Kinetics of Photoinduced Cross-Linking of Silica Nanoparticles with Surface-Tethered Anthracenes

Mostafavi, S.H.; Mettry, M.; Gill, A.D.; Easley, C.J.; Hooley, R.J.; Bardeen, C.J.

Chem. Phys. Lett. 2020, 741, 137059.

DOI: 10.1016/j.cplett.2019.137059

80. Sensing of Citrulline Modifications in Histone Peptides by Deep Cavitand Hosts

Gill A. D.; Hickey B. L.; Wang S.; Xue M.; Zhong W.; Hooley R. J.

Chem. Commun. 2019, 55, 13259–13262.

DOI: 10.1039/C9CC07002H

79. A Supramolecular Sensor Array for Selective Immunoglobulin Deficiency Analysis

Liu, Y.; Gill, A. D.; Perez, L.; Hooley, R. J.; Zhong, W.

Chem. Commun. 2019, 55, 11563–11566.

DOI: 10.1039/C9CC06064B

78. Cofactor-Mediated Nucleophilic Substitution Catalyzed by a Self-Assembled Holoenzyme Mimic

Ngai, C.; Bogie, P. M.; Holloway, L. R.; Dietz, P. C.; Mueller, L. J.; Hooley, R. J.

J. Org. Chem., 2019, 84, 12000-12008.

DOI: 10.1021/acs.joc.9b01880

77. A Self-Assembled Cage with Endohedral Acid Groups both Catalyzes Substitution Reactions and Controls their Molecularity

Bogie, P. M.; Holloway, L. R.; Ngai, C.; Miller, T. F.; Grewal, D. K.; Hooley, R. J.

Chem. Eur. J., 25, 2019, 10232-10238.

DOI: 10.1002/chem.201902049

76. Resorcin[4]arenes: A Convenient Scaffold To Study Supramolecular Self-Assembly and Host:Guest Interactions for the Undergraduate Curriculum

Young, M.C.; Djernes, K.E.; Payton, J.L.; Liu, D.; Hooley, R.J.

J. Chem. Ed. 2019, 96, 781–785.

DOI: 10.1021/acs.jchemed.8b00722

75. Selective Array-based Sensing of Anabolic Steroids in Aqueous Solution by Host:Guest Reporter Complexes

Gill, A. D.; Perez, L.; Salinas, I. N. Q.; Byers, S. R.; Liu, Y.; Hickey, B. L.; Zhong, W.;

Hooley, R. J.

Chem. Eur. J., 2019, 25, 1740-1745.

DOI: 10.1002/chem.20180485

74. Metal-Assisted Selective Recognition of Biothiols by a Synthetic Receptor Array

Liu, Y.; Duan, Y.; Gill, A. D.; Perez, L.; Jiang, Q.; Hooley, R. J.*, Zhong, W.*

Chem. Commun., 2018, 54, 13147-13150.

DOI: 10.1039/C8CC07220E

73. Selective Sensing of Phosphorylated Peptides and Monitoring Kinase and Phosphatase Activity with a Supramolecular Tandem Assay

Liu, Y.; Lee, J.; Perez, L.; Gill, A. D.; Hooley, R. J.*, Zhong, W.*

J. Am. Chem. Soc. 2018, 140, 13869-13877.

DOI: 10.1021/jacs.8b08693

72. Small Structural Variations have Large Effects on the Assembly Properties and Spin State of Room Temperature High Spin Fe(II) Iminopyridine Cages

Miller, T. F.; Holloway, L. R.; Nye, P. P.; Lyon, Y.; Beran, G. J. O.; Harman, W. H.; Julian, R. R.; Hooley, R. J.

Inorg. Chem. 2018, 57, 13386-13396.

DOI: 10.1021/acs.inorgchem.8b01973

71. Synthesis and Applications of Endohedrally Functionalized Metal-Ligand Cage Complexes

Bogie, P. M.; Miller, T. F.; Hooley, R. J.

Isr. J. Chem. 2019, 59, 130-139.

DOI: 10.1002/ijch.201800067

70. Boosting the Heavy Atom Effect by Cavitand Encapsulation: Room Temperature Phosphorescence of Pyrene in the Presence of Oxygen

Easley, C. J.; Mettry, M.; Moses, E. M.; Hooley, R. J.*, Bardeen, C. J.*

J. Phys. Chem. A. 2018, 122, 6578-6584.

DOI: 10.1021/acs.jpca.8b05813

69. Tandem Reactivity of a Self-Assembled Cage Catalyst with Endohedral Acid Groups

Holloway, L. R.; Bogie, P. M.; Lyon, Y.; Ngai, C.; Miller, T. F.; Julian, R. R.; Hooley, R. J.

J. Am. Chem. Soc. 2018, 140, 8078-8081.

DOI: 10.1021/jacs.8b03984

68. A Springloaded Metal-Ligand Mesocate Allows Access to Trapped Intermediates of Self-Assembly

Bogie, P. M.; Holloway, L. R.; Lyon, Y.; Onishi, N. C.; Beran, G. J. O.; Julian, R. R.; Hooley, R. J.

Inorg. Chem. 2018, 57, 4155-4163.

DOI: 10.1021/acs.inorgchem.8b00370

67. Rings and Things: The Magic of Building Self-Assembled Cages and Macrocycles

Hooley, R. J.

Inorg. Chem. 2018, 57, 3497-3499.

DOI: 10.1021/acs.inorgchem.8b00553

66. Lipid Bilayer Environments Control Exchange Kinetics of Deep Cavitand Hosts and Enhance Disfavored Guest Conformations

Perez, L.; Mettry, M.; Caulkins, B.G.; Mueller, L.J.; Hooley, R.J.

Chem. Sci. 2018, 9, 1836 – 1845.

DOI:  10.1039/C7SC05155G 

65. Separation of Methylated Histone Peptides via Host-Assisted Capillary Electrophoresis

Lee, J.; Perez, L.; Liu, Y.; Wang, H.; Hooley, R. J.; Zhong, W.

Anal. Chem. 2018, 90, 1881-1188.

DOI: 10.1021/acs.analchem.7b03969

64. Controlled Self-Sorting in Self-Assembled Cage Complexes

Holloway, L. R.; Bogie, P. M.; Hooley, R. J.

Dalton Trans. 2017, 46, 14719-14723.

DOI: 10.1039/C7DT03399K

63. Selective Heavy Element Sensing with a Simple Host:Guest Fluorescent Array

Liu, Y.; Mettry, M.; Gill, A.D.; Perez, L.; Zhong, W.; Hooley, R.J.

Anal. Chem. 2017, 89, 11113–11121.

DOI: 10.1021/acs.analchem.7b03377

62. Stereoselective Post-Assembly CH Oxidation of Self-Assembled Metal-Ligand Cage Complexes

Holloway, L. R.; Bogie, P. M.; Lyon, Y.; Julian, R. R.; Hooley, R. J.

Inorg. Chem. 2017, 56, 11435-11442.

DOI: 10.1021/acs.inorgchem.7b01958

61. Site-Selective Sensing of Histone Methylation Enzyme Activity via an Arrayed Supramolecular Tandem Assay

Liu, Y.; Perez, L.; Gill, A. D.; Mettry, M.; Li, L.; Wang, Y.; Hooley, R. J.; Zhong, W.

J. Am. Chem. Soc. 2017, 139, 10964-10967.

DOI: 10.1021/jacs.7b05002

60. Metal-Selective Coordination and Enhanced Fluorescence of a Self-Assembling Ligand Scaffold

Bogie, P. M.; Holloway, L. R.; Lyon, Y.; Julian, R. R.; Hooley, R. J.

Supramol. Chem. 2017, 29, 936-945.

DOI: 10.1080/10610278.2017.1347261

59. Selective Protein Recognition in Supported Lipid Bilayer Arrays by Tailored, Dual-Mode Deep Cavitand Hosts

Perez, L.; Mettry, M.; Hinman, S. S.; Byers, S. R.; McKeating, K. S.; Caulkins, B. G.; Cheng, Q.; Hooley, R. J.

Soft Matter 2017,13, 3966-3974.

DOI: 10.1039/C7SM00192D

58. Site Selective Reading of Epigenetic Markers by a Dual-Mode Synthetic Receptor Array

Liu, Y.; Perez, L.; Mettry, M.; Gill, A. D.; Byers, S. R.; Easley, C. J.; Bardeen, C. J.; Zhong, W.*; Hooley, R. J.*

Chem. Sci. 2017, 8, 3960-3970.

DOI: 10.1039/C7SC00865A

57. Alkane Oxidation Catalyzed by a Self-Folded Multi-Iron Complex

Mettry, M.; Moehlig, M. P.; Gill, A.; Hooley, R. J.

Supramol. Chem, 2017, 29, 120-128.

DOI: 10.1080/10610278.2016.1177184

56. Electronic Effects on Narcissistic Self-Sorting in Multicomponent Self-Assembly of Fe-Iminopyridine meso-Helicates

Wiley, C.A.; Holloway, L.R.; Miller, T.F.; Lyon, Y.; Julian, R.R.; Hooley, R.J.

Inorg. Chem. 2016, 55, 9805–9815.

DOI: 10.1021/acs.inorgchem.6b01644

55. Self-Aggregating Deep Cavitand Acts as a Fluorescence Displacement Sensor for Lysine Methylation 

Liu, Y.; Perez, L.; Mettry, M.; Easley, C.J.; Hooley, R.J.; Zhong, W. 

J. Am. Chem. Soc. 2016, 138, 10746–10749. 

DOI: 10.1021/jacs.6b05897

54. Receptors Based on Van der Waals’ Forces 

Mettry, M.; Hooley, R. J.

Comprehensive Supramolecular Chemistry II, Atwood, J.L., Gokel, G.W., ed., Elsevier, 2016. 

DOI: 10.1016/B978-0-12-409547-2.12479-5


53. Endohedral Functionalization of Coordination Cages 

Johnson, A. M.; Hooley, R. J.

Self-Assembled Rings and Cages, Clever, G.H. ed., Wiley, 2016.


52. Structural Switching in Self-Assembled Metal-Ligand Helicate Complexes via Ligand-Centered Reactions 

Holloway, L.R.; McGarraugh, H.H.; Young, M.C.; Sontising, W.; Beran, G.J.O.; Hooley, R.J 

Chem. Sci. 2016, 7, 4423–4427 

DOI: 10.1039/C6SC01038E

51. Taking on the Turnover Challenge 

Hooley, R. J.

Nat. Chem. 2016, 8, 202–204.

DOI: 10.1038/nchem.2461 

50. Endosidin2 targets conserved EXO70 to inhibit exocytosis 

Zhang, C.; Brown, M.Q.; van de Ven, W.; Zhang, Z.-M.; Wu, B.; Young, M.C.; Synek, L.; Borchardt, D.; Harrison, R.; Pan, S.; Luo, N.; Huang, Y.M.; Ghang, Y.-J.; Ung, N.; Li, R.; Isley, J.; Morikis, D.; Song, J.; Guo, W.; Hooley, R.J.; Chang, C.A.; Yang, Z.; Zarsky, V.; Muday, G.K.; Hicks, G.R.; Raikhel, N.V 

Proc. Natl. Acad. Sci., U.S.A. 2016, 113, E41–E50. 

DOI: 10.1073/pnas.1521248112

Work Pre-2016

49. Perez, L.; Ghang, Y.-J.; Williams, P.B.; Wang, Y.; Cheng, Q.; Hooley, R. J. “Cell and Protein Recognition at a Supported Bilayer Interface via In Situ Cavitand-Mediated Functional Polymer Growth” Langmuir 2015, 31, 11152–11157.

48. Holloway, L.R.; Young, M.C.; Beran, G.J.O.; Hooley, R.J. "High Fidelity Sorting of Remarkably Similar Components via Metal-Mediated Assembly” Chem. Sci. 2015, 6, 4801–4806.

47. Mettry, M.; Moehlig, M.P.; Hooley, R.J. "Synthesis, Guest Binding and Metal Coordination of Functionalized Self-folding Deep Cavitands" Org. Lett. 2015, 17, 1497–1500.

46. Johnson, A.M.; Wiley, C.A.; Young, M.C.; Zhang, X.; Lyon, Y.; Julian, R.R.; Hooley, R.J. "Narcissistic Self-Sorting in Self-Assembled Rare Earth Metal-Ligand Cages" Angew. Chem. Int. Ed. 2015, 54, 5641–5645.

45. Ghang, Y.-J.; Perez, L.; Morgan, M. A.; Si, F.; Hamdy, O. M.; Beecher, C. N.; Larive, C. K.; Julian, R. R.; Zhong, W.; Cheng, Q.; Hooley, R. J. "Anionic Deep Cavitands Enable the Adhesion of Unmodified Proteins at a Membrane Bilayer" Soft Matter 2014, 10, 9651–9656.

44. Ghang, Y.-J.; Lloyd, J.J.; Moehlig, M.P.; Arguelles, J.K.; Mettry, M.; Zhang, X.; Julian, R.R.; Cheng, Q.; Hooley, R.J. "Labeled Protein Recognition at a Membrane Bilayer Interface by Embedded Synthetic Receptors" Langmuir 2014, 30, 10161–10166.

43. Young, M.C.; Holloway, L.R.; Johnson, A.M.; Hooley, R.J. "A Supramolecular Sorting Hat: Stereocontrol in Metal-Ligand Self-Assembly by Complementary Hydrogen Bonding" Angew. Chem. Int. Ed. 2014, 53, 9832–9836.

42. Hooley, R.J.; Gavette, J.V.; Mettry M.; Ajami, D.; Rebek, J., Jr. "Unusual Orientation And Reactivity of Alkyl Halides in Water-Soluble Cavitands" Chem. Sci. 2014, 5, 4382–4387.

41. Young, M.C.; Liew, E.; Hooley, R.J. "Colorimetric Barbiturate Sensing with Hybrid Spin Crossover Assemblies" Chem. Commun. 2014, 50, 5043 – 5045.

40. Young, M.C.; Johnson, A.M.; Hooley, R.J. "Self-Promoted Post-Synthetic Modification of Metal-Ligand M2L3 Mesocates" Chem. Commun. 2014, 50, 1378 – 1380.

39. Li, V.; Ghang, Y.-J.; Hooley, R.J.; Williams T.J. "Non-Covalent Self Assembly Controls the Relaxivity of Magnetically Active Guests" Chem. Commun. 2014, 50, 1375 – 1377.

38. Johnson, A.M.; Young, M.C.; Zhang, X.; Julian, R.R.; Hooley, R.J. "Cooperative Thermodynamic Control of Selectivity in the Self-Assembly of Rare Earth Metal-Ligand Helices" J. Am. Chem. Soc. 2013, 135, 17723–17726.

37. Hong, J.; Djernes, K.E.; Lee, I.; Hooley, R.J.; Zaera, F. "Heterogeneous Catalyst for the Selective Oxidation of Unactivated Hydrocarbons Based on a Tethered Metal-Coordinated Cavitand" ACS Catal. 2013, 3, 2154–2157.

36. Young, M.C.; Liew, E.; Ashby, J.; McCoy, K.E.; Hooley, R.J. "Spin State Modulation of Iron Spin Crossover Complexes Via Hydrogen-Bonding Self-Assembly" Chem. Commun. 2013, 49, 6331–6333.

35. Ghang, Y.-J.; Schramm, M.P.; Zhang, F.; Acey, R.A.; David, C.N.; Wilson, E.H.; Wang, Y.; Cheng, Q.; Hooley, R.J. "Selective Cavitand-Mediated Endocytosis of Targeted Imaging Agents into Live Cells" J. Am. Chem. Soc. 2013, 135, 7090–7093. (Highlighted in Nat. Chem. 2013, 5, 550)

34. Johnson, A.M.; Young, M.C.; Hooley, R.J. "Reversible Multicomponent Self-Assembly Mediated By Bismuth Ions" Dalton Trans. 2013, 42, 8394–8401.

33. Young, M.C.; Johnson, A.M.; Gamboa, A.S.; Hooley, R.J. "Achiral Endohedral Functionality Provides Stereochemical Control in Fe(II)-Based Self-Assemblies" Chem. Commun. 2013, 49, 1627–1629.

32. Djernes, K.E.; Padilla, M.; Mettry, M.; Young, M.C.; Hooley, R.J. “Hydrocarbon Oxidation Catalyzed by Self-folded Metal-coordinated Cavitands” Chem. Commun. 2012, 48, 11576 – 11578.

31. Liu, Y.; Young, M.C.; Moshe, O.; Cheng, Q.; Hooley, R.J. "A Membrane-Bound Synthetic Receptor Promotes Growth of a Polymeric Coating at the Bilayer-Water Interface" Angew. Chem. Int. Ed. 2012, 51, 7748–7751.

30. Moehlig, A.R.; Djernes, K.E.; Krishnan, V.M.; Hooley, R.J. “Cytosine Derivatives Form Hemiprotonated Dimers in Solution and the Gas Phase” Org. Lett. 2012, 14, 2560–2563.

29. Djernes, K.E.; Moshe, O.; Mettry, M.; Richards, D.D.; Hooley, R.J. “Metal-coordinated Water Soluble Cavitands act as C-H Oxidation Catalysts” Org. Lett. 2012, 14, 788–791.

28. Liu, Y.; Taira, T.; Young, M.C.; Ajami, D.; Rebek, J., Jr.; Cheng, Q.; Hooley, R.J. “Protein Recognition by a Self-Assembled Deep Cavitand Monolayer on a Gold Substrate” Langmuir, 2012, 28, 1391–1398.

27. Johnson, A.M.; Moshe, O.; Gamboa, A.S.; Langloss, B.W.; Limtiaco, J.F.K.; Larive, C.K.; Hooley, R.J. “Synthesis and Properties of Metal-Ligand Complexes with Endohedral Amine Functionality” Inorg. Chem., 2011, 50, 9430–9442.

26. Johnson, A.M.; Hooley, R.J. “Steric Effects Control Self-Sorting in Self-Assembled Clusters” Inorg. Chem., 2011, 50, 4671–4673.

24. Liu, R.; Liao, P.; Zheng, Z.; Hooley, R.J.; Feng, P. “A Water-soluble Deep Cavitand Acts as a Release Trigger for a Supramolecular Nanocap” Chem. Mater. 2010, 22, 5797–5799.

23. Liao, P.; Langloss, B.W.; Johnson, A.M.; Knudsen, E.R.; Tham, F.S.; Julian, R.R., Hooley, R.J. “Two-Component Control of Guest Binding in a Self-Assembled Cage Molecule” Chem. Commun. 2010, 46, 4932–4934.

22. Liu, Y.; Liao, P.; Cheng, Q.; Hooley, R.J. “Protein and Small Molecule Recognition Properties of Deep Cavitands in a Supported Lipid Membrane Determined by Calcination-Enhanced SPR Spectroscopy” J. Am. Chem. Soc. 2010, 132, 10383–10390.

Postdoctoral Work

25. Ajami, D.; Kamioka, S.; Sather, A.C.; Hooley, R.J.; Rebek, J., Jr. “Autocatalysis and Organocatalysis with Kemp’s Triacid Compounds” Heterocycles 2011, 82, 1203-1215.

21. Hooley, R.J.; Rebek, J., Jr. “Chemistry and Catalysis in Functional Cavitands” Chem. Biol., 2009, 16, 255–264.

20. Tran, C.D.; Mejac, I.; Rebek, J., Jr; Hooley, R.J. “Gas Chromatographic Separation of Isotopic Molecules Using a Novel Cavitand-impregnated Stationary Phase” Anal. Chem., 2009, 81, 1244–1254.

19. Hooley, R.J.; Shenoy, S.R.; Rebek, J., Jr. “Electronic and Steric Effects in Binding of Deep Cavitands” Org. Lett., 2008, 10, 5397–5400.

18. Hooley, R.J.; Restorp, P.; Rebek, J., Jr. “A Cavitand with a Fluorous Rim acts as an Amine Receptor” Chem. Commun., 2008, 44, 6291–6293.

17. Lledó, A.; Hooley, R.J.; Rebek, J., Jr. “Recognition of Guests by Water-stabilized Cavitand Hosts” Org. Lett., 2008, 10, 3669–3671.

16. Podkoscielny, D.; Hooley, R.J.; Rebek, J., Jr.; Kaifer, A.E. “Ferrocene Derivatives Included in a Water-Soluble Cavitand: Are They Electroinactive?” Org. Lett., 2008, 10, 2865–2868.

15. Hooley, R.J.; Iwasawa, T.; Rebek, J., Jr. “Detection of Reactive Tetrahedral Intermediates in a Deep Cavitand with an Introverted Functionality” J. Am. Chem. Soc. 2007, 129, 15330–15339.

14. Hooley, R.J.; Rebek, J., Jr. “A Deep Cavitand Catalyzes the Diels-Alder Reaction of Bound Maleimides” Org. Biomol Chem., 2007, 5, 3631–3636 (Highlighted as a Hot Article, Org. Biomol Chem., 2007, 5, issue 22; highlighted in Chem. Sci., 2007, 4, C90).

13. Hooley, R.J.; Restorp, P.; Iwasawa, T.; Rebek, J., Jr. “Cavitands With Introverted Functionality Stabilize Tetrahedral Intermediates” J. Am. Chem. Soc., 2007, 129, 15639–15643.

12. Hooley, R.J.; Van Anda, H. J.; Rebek, J., Jr. “Extraction of Hydrophobic Species into a Water-Soluble Synthetic Receptor” J. Am. Chem. Soc., 2007, 129, 13464–13473.

11. Schramm, M.P.; Hooley, R.J.; Rebek, J., Jr. "Guest Recognition with Micelle-Bound Cavitands" J. Am. Chem. Soc., 2007, 129, 9773–9779.

10. Iwasawa, T.; Hooley, R.J.; Rebek, J., Jr. “Stabilization of Labile Carbonyl Addition Intermediates by a Synthetic Receptor” Science, 2007, 317, 493–496. (Highlighted in Chemical & Engineering News, 85 (32), August 1, 2007)

9. Hooley, R.J.; Rebek, J., Jr. “Self-Complexed Deep Cavitands – Alkyl Chains Coil Into A Nearby Cavity” Org. Lett., 2007, 9, 1179–1182.

8. Hooley, R.J.; Biros, S.M.; Rebek, J., Jr. “A Deep, Water-Soluble Cavitand Acts as a Phase-Transfer Catalyst for Hydrophobic Species” Angew. Chem. Int. Ed. 2006, 45, 3517–3519.

7. Hooley, R.J.; van Anda, H.J.; Rebek, J., Jr. “Cavitands With Revolving Doors Regulate Binding Selectivities and Rates in Water.” J. Am. Chem. Soc., 2006, 128, 3894–3895.

6. Hooley, R.J.; Biros, S.M.; Rebek, J., Jr. “Normal Hydrocarbons Writhe and Tumble in a Water-Soluble Cavitand” Chem. Commun. 2006, 42, 509–511.

5. Hooley, R.J.; Rebek, J., Jr. “Deep Cavitands Provide Organized Solvation of Reactions” J. Am. Chem. Soc., 2005, 127, 11904–11905.


Graduate Work

4. Semmelhack, M.F.; Hooley, R.J.; Kraml, C.M. “Synthesis of Plakortone B and Analogs” Org. Lett., 2006, 8, 5203–5206.

3. Semmelhack, M.F.; Hooley, R.J. “Palladium-Catalyzed Hydrostannylations of Highly Hindered Acetylenes in Hexane” Tetrahedron Lett., 2003, 44, 5737–5739.

2. Hooley, R.J.; Lee, C.B. Commentary on “Iron-Catalyzed Cross-Coupling Reactions of Alkyl-Grignard Reagents with Aryl Chlorides, Tosylates and Triflates” Chemtracts – Organic Chemistry, 2003, 518.

Undergraduate Work

1. Christlieb ; Davies, J.E.; Eames, J.; Hooley, R.; Warren, S.W. “The Stereoselective Synthesis of Oxetanes; Exploration of a New, Mitsunobu-Style Procedure for the Cyclisation of 1,3-Diols.” J. Chem. Soc. Perkin Trans. 1, 2001, 2983–2996.