DAY 2
DAY 2
ISCB endorsement (Theme 2)
The Bioinformatics Education summit gathers representatives from academia, research institutes, industry and other stakeholders who are involved in different aspects of capacity building in the disciplines of bioinformatics and computational biology. The LMICs session at the summit started on the 2020 iteration of the event, it was created to start addressing topics of special interest to the communities within the Low-to-Middle-Income countries focusing on their specific challenges.
As a result of the first meeting the LMICs community is in the process of issuing the best practices guidelines and recommendations and is set to initiate living documents and resources that will be available to the training community in general.
This year we are being welcomed by The Asia Pacific Bioinformatics Network, APBioNET. The LMICs community is continuing and extending their discussions to tackle concerns related to support education and training in these countries, shared bioinformatics infrastructure, and broadening bioinformatics training to non-hot spot regions. The activities will also take us to and update on the best practices guidelines and H3ABioNet’s ‘Simple rules on starting bioinformatics from scratch’ publication
2022 summit will be held on May 9, 10 and 11, LMICs session to take place on day 2 in parallel with the ‘ISCB endorsement’ theme
Two time zones will be running, KUL/SG (GMT+8) and Toronto/NY (GMT-4)
Regions: Asia/Australia, North America
4.5 hrs session per region
½ hour break
1 hour of joint discussion, all themes & all timezones (typically used as ‘reporting’ time)
1 hour of joint discussion per individual theme, both timezones (often used as ‘handover’ from one time zone to another
2 hours of individual work per theme/time zone
Send materials and activities at least 1 week before
2022 Session Goals/Objectives:
To complete a draft of the best practices document - requests for case studies to be included
Work on guidelines/rules for decentralisation based on last year’s efforts
Discussion around building and maintaining common Bioinformatics education infrastructure - how do we start to do this, what will be the challenges and advantages - how do we get larger organisations to buy in and support smaller organisation
DAY 2 Programme
Introductory presentation
Bioinformatics from scratch (Verena)
CABANA updates (Piv)
Quick summary of what has been accomplished at the previous LMICs sessions and what projects we are working on (Pati)
Decentralisation document - copy previous document and demarcate between the two time zones so that we can track contributions
Consolidated Best practices document
Document to collect ideas/challenges/solutions for beginning to build and maintain common education infrastructure. (Develop and maintain common infrastructure generate the document) - Verena
Potential funding agencies (e.g. Chan Zuckerberg initiative) and experiences on setting up training infrastructure: invite Jason Williams to give a spotlight talk
Where common infrastructure can be developed
Data and materials
Setting up training
Collection of some articles or resources from others who have started to do this : Galaxy etc.