Proceedings & Zenodo

Accepted Papers at EcoDL 2025

The following nine papers have been accepted to be published in the EcoDL 2025 workshop proceedings.

1. Assessing the landscape of digital species identifiers by Ricardo Correia and Maxim Isaac

2. Validation challenges in large-scale tree crown segmentations from remote sensing imagery using Deep Learning: a case study in Germany  by Taimur Khan, Jasmin Krebs, Sharad Gupta, Jonathan Renkel, Caroline Arnolds and Nils Nölke 

3. Managing FAIR research products for biodiversity and ecosystems within the LifeWatch Italy Infrastructure by Andrea Tarallo, Cristina Di Muri, Martina Pulieri, Francesco De Leo, Mariantonietta La Marra, Davide Raho, Alberto Basset and Ilaria Rosati 

4. Flexible metadata harvesting for ecology using large language models by Zehao Lu, Thijs van der Plas, Parinaz Rashidi, Daniel Kissling and Ioannis Athanasiadis 

5. Ecolink: Towards a knowledge graph schema for complex environmental systems by Tim Alamenciak, Carlos Alberto Arnillas, Harry Caufield, Katherine Compton, Kian Drew, Robert Frühstückl, Tina Heger, Birgitta König-Ries, Chris Mungall, Sierra Moxon, Justin Reese, Jordan Tardif and Lars Vogt 

6. Monitoring and Modeling the Dynamics of Halophila stipulacea Meadows Using Satellite Imagery and Machine Learning Techniques by Tom Avikasis Cohen, Gil Rilov, Gidon Winters Gidon Winters and Anna Brook 

7. Compressed Species Classification Models for Biodiversity Monitoring by Katriona Goldmann, Oliver Strickson, Tom A August, Jonas Beuchert, Dylan Carbone, Mariya Iqbal, Jenna Lawson, Grace Skinner and David Roy 

8. Creating datasets of moth morphology and behaviour from textual sources with large language models by Bartolomé Ortiz, Jenna L Lawson and Tom August 

9. Augmenting Geospatial Data With Large Language Models Using Compositional Attention for Improved Avian Mobility Tasks Prediction by Kehinde Owoeye 

All accepted long and short workshop papers will be published in the Springer series Communications in Computer and Information Science (CCIS). Link to the proceedings to be announced...

Accepted Posters at EcoDL 2025

The following eight abstracts have been accepted to be presented as posters at the EcoDL 2025 workshop.

1. PhenoBees: a semantic workflow and knowledge base for bee phenotypes by Thiago S. R. Silva, Eduardo A. B. Almeida, James Balhoff, István Mikó, Michael Orr, Juho Paukkunen, Katja Seltmann, Sergei Tarasov, Lars Vilhelmsen and Diego S. Porto 

2. Bridging biodiversity and ecosystem data with an ontology-driven approach by Martina Pulieri, Parham Ramezani, Davide Raho, Cristina Di Muri, Lucia Vaira and Ilaria Rosati 

3. GlobalFungi: Open Database of Fungal Biodiversity from High-Throughput Metabarcoding Studies by Michal Hub, Peter Baldrian and Tomáš Větrovský 

4. Transforming Conservation Decision-Making through the Sensor Analysis and Integration Layer (SAIL) Framework: A Vision for Edge AI and Cross-device Communication by Naveen Dhar

5. A Knowledge Database to strengthen European Environmental Policies and Integrated Environmental Research by Roxanne Leberger, Simon Meier-Vieracker, Harsh Grover, Roel May, Matthew Grainger and Marie Vandewalle 

6. A Terminology Service to empower semantic interoperability in environmental sciences by Davide Raho, Cristina Di Muri, Alexandra N. Muresan, Martina Pulieri and Ilaria Rosati 

7. Investigating the information enclosed in the price of honey by Mathieu Kohli 

8. Beyond the margins: Machine learning reveals hidden vulnerabilities and drivers of plant migration by Ilya Shabanov, Andrew Lensen, Jonathan Tonkin and Julie Deslippe 

EcoDL 2025 has a dedicated Zenodo community at https://zenodo.org/communities/ecodl-2025/about, providing long-term access to workshop-related materials such as posters, papers, datasets, software, presentations, and other research outputs. We welcome you to visit the community and contribute!