Publications
Peer-reviewed articles
1. R. Öberg, T. Dahlberg, D. Malyshev, M. Andersson* Monitoring bacterial spore metabolic activity using heavy water-induced Raman peak evolution (2023) The Analyst 10.1039/D2AN02047E
2. D. Nilsson, UL. Jonsmoen, D. Malyshev, R. Öberg, K. Wiklund, M. Andersson* Physico-chemical characterization of single bacteria and spores using optical tweezers (2023) Research in Microbiology RESMIC-D-22-00721R1
3. S. Valijam, D. Nilsson, R. Öberg, UL Jonsmoen, A. Porsch, M. Andersson*, D. Malyshev* A lab-on-a-chip utilizing microwaves for bacterial spore disruption and detection (2023) Biosensors and Bioelectronics 10.1016/j.bios.2023.115284
4. M. Doran, T. Dahlberg, J. Baker, M. Andersson, E. Bullitt Three structural solutions for bacterial adhesion pilus stability and superelasticity (2023) Structure 10.1016/j.str.2023.03.005
5. J. Patkowski, T. Dahlberg, H. Amin, D. Gahlot, S. Vijayrajratnam, J. Vogel, M. Francis, J. Baker*. M. Andersson*, T. Costa* The F-pilus biomechanical adaptability accelerates conjugative dissemination of antimicrobial resistance and biofilm formation (2023) Nature Communications
6. E.V. Alakpa, A. Bahrd, K. Wiklund, M. Andersson, L.N. Novikov, C. Ljungberg, P. Kelk Bioprinted Schwann and mesenchymal stem cell co-cultures for enhanced spatial control of neurite outgrowth (2023) Gels, 9(3)
7. S. Valijam, A. Salehi, and M. Andersson Low-voltage dielectrophoresis lab-on-the chip to separate tumor and blood cells (2023) Microfluidics and Nanofluidics 27(22)
8. D. Malyshev, IA. Jones, M. McKracken, G. Harper, LT. Joshi, M. Andersson Hypervirulent R20291 Clostridioides difficile spores show disinfection resilience to sodium hypochlorite despite structural changes (2023) BMC Microbiology 23(1)
9. Pakharukova, N., Malmi, H., Tuittila, M., Dahlberg, T., Ghosal, D., Chang, Y.-W., Myint, S. L., Paavilainen, S., Knight, S. D., Lamminmäki, U., Uhlin, B. E., Andersson, M., Jensen, G., & Zavialov, A. V. (2022). Archaic chaperone–usher pili self-secrete into superelastic zigzag springs. Nature, 609(7926), 335–340
10. D. Nilsson, M. Holmgren, P. Holmlund, A. Wåhlin, A. Eklund, T. Dahlberg, K. Wiklund and M. Andersson Patient-specific brain arteries molded as a flexible phantom model using 3D printed water-soluble resin (2022) Scientific Reports 12(1)
11. D. Malyshev, NF. Robinson, R. Oberg, T, Dahlberg, and M. Andersson, Reactive oxygen species generated by infrared laser light in optical tweezers inhibits the germination of bacterial spores (2022) Journal of Biophotonics, 15(8)
12. T. Dahlberg, J. Baker, E. Bullitt, and M. Andersson Unveiling molecular interactions that stabilize bacterial adhesion pili (2022) Biophysical Journal 121(11)
13. D. Malyshev, T. Dahlberg, R. Öberg, L. Landström, and M. Andersson Reference Raman spectra and Raman mapping of Cryptosporidium oocysts (2022) Journal of Raman Spectroscopy 53(7)
14. D. Malyshev, R. Öberg, L. Landström, PO Andersson, T. Dahlberg, and M. Andersson pH induced changes in Raman, UV-Vis absorbance, and fluorescence spectra of dipicolinic acid (DPA) (2022) Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy 271
15. D. Malyshev, R. Öberg, T. Dahlberg, K. Wiklund, L. Landström, PO Andersson, and M. Andersson Laser induced degradation of bacterial spores during micro-Raman spectroscopy 265 (2022) Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy, 265
16. T. Näsström, T. Dahlberg, D. Malyshev, J. Ådén, PO. Andersson, M. Andersson, B. Karlsson Synthetic NAC 71-82 peptides designed to produce fibrils with different protofilament interface contacts - a diagnostic tool for in situ time-correlated single photon counting (2021) International Journal of Molecular Sciences, 22 (17), 9334
17. T. Dahlberg and M. Andersson Optical design for laser tweezers Raman spectroscopy setups for increased sensitivity and flexible spatial detection (2021) Applied optics, 60 (16), 4519-4523
18. D. P.G Nilsson, T. Dahlberg, and M. Andersson A Step-by-Step Guide to 3D Print Motorized Rotation Mounts for Optical Applications (2021) Applied optics, 60 (13), 3764-3771
19. V. Panadeiro, A. Rodriguez, J. Henry, D. Wlodkowic, and M. Andersson A review of 28 free animal tracking software: current features and limitations (2021) Lab Animal, 50, 246-254
20. J. Baker, T. Dahlberg, E. Bullitt, and M. Andersson Impact of an alpha helix and a cysteine-cysteine disulfide bond on the resistance of bacterial adhesion pili to stress (2021) Proceedings of the National Academy of Sciences 118 (21), e2023595118
21. D. Malyshev, T. Dahlberg, K. Wiklund, PO Andersson, S. Henriksson, and M. Andersson Disinfection chemicals mode of action on the bacterial spore structure and their Raman spectra (2021) Analytical Chemistry, 10.1021/acs.analchem.0c04519
22. J. Enevold, T. Dahlberg, T. Stangner, S. Tang, M. Lindh, E. Gracia, and M. Andersson, and L. Edman Tunable two-dimensional patterning of a semiconducting C60 fullerene film with a spatial light modulator for enhanced device operation (2020) Applied Nano Materials (an-2020-00793n.R2)
23. S. Escamez, D. Andre, B. Sztojka, B. Bollhöner, H. Hall, B. Berthet, A. Lers, A. Maizei, M. Andersson, M. Bennett, and H. Tuominen Cell death in cells overlying lateral root primordia contributes to organ growth in Arabidopsis (2020) Current Biology 30(3)
24. W. Zheng, M. Andersson, N. Mortezaei, E. Bullitt, E. H. Egelman, Cryo-EM Structure of the CFA/I Pilus Rod (2019) IUCrJ 6(5), 815-821
25. H. Zhang, N. Söderholm, L. Sandblad, K. Wiklund, and M. Andersson. DSeg: A dynamic image segmentation program to extract backbone patterns for filamentous bacteria and hyphae structures (2019) Microscopy and Microanalysis, 1-9.
26. M. Jonsson, M. Andersson, J. Fick, T. Brodin. J. Klaminder. S. Piovano High-speed imaging reveals how antihistamine exposure affects escape behaviors in ambush predator’s prey (2019) Science of the Total Environment 648: 1257-1262
27. H. Zhang, T. Stangner, K. Wiklund and M. Andersson. Object Plane Detection and Phase Retrieval from Single-Shot Holograms using Multi-Wavelength In-Line Holograph (2018) Applied optics 57(33), 9855-986
28. T. Stangner, T. Dahlberg, P. Svenmarker, J. Zakrisson, K. Wiklund, L. Oddershede and M. Andersson, Cooke-Triplet-Tweezers: More compact, robust and efficient optical tweezers (2018) Optics Letter 43(9), 1990-1993
29. A. Rodriguez, H. Zhang, J. Klaminder, T. Brodin, P.L. Andersson, and M. Andersson. ToxTrac: a fast and robust software for tracking organisms, (2018) Methods in Ecology and Evolution 9(3)
30. K. Wiklund, H. Zhang, T. Stangner, B. Singh, M. Andersson, A drag force interpolation model for capsule shaped cells in fluid flows. (2018) Microbiology MIC-D-17-00377R1
31. T. Dahlberg, T. Stangner, H. Zhang, K. Wiklund, M. Andersson, 3D printed water-soluble scaffold for rapid production of PDMS micro-fluidic flow chambers. (2018) Scientific Reports 8(1)
32. C. Spaulding, H. Schreiber, W. Zheng, K. Dodson, M. S. Conover, F. Wang, P. Svenmarker, A. Luna-Rico, O. Francetic, M. Andersson, S J. Hultgren, E. H. Egelman. Functional role of the type 1 pilus rod structure in mediating host-pathogen interactions. (2018) eLife 7 e31662
33. J. Enevold, C. Larsen, J. Zakrisson, M. Andersson, L. Edman, Realizing Large-Area Arrays of Semiconducting Fullerene Nanostructures with Direct Laser Interference Patterning (2018) Nano Letters 18(1), 540-545
34. A. Rodriguez, H. Zhang, J. Klaminder, T. Brodin, & M. Andersson, ToxId: an efficient algorithm to solve occlusions when tracking multiple animals. (2017) Scientific reports 7(1)
35. H. Zhang, T. Stangner, K. Wiklund, A. Rodriguez, M. Andersson UmUTracker: A versatile MATLAB program for automated particle tracking of 2D light microscopy or 3D digital holography data (2017) Computer Physics Communications 219, 390–399
36. T. Stangner, H. Zhang, T. Dahlberg, K. Wiklund, M. Andersson A step-by-step guide to reduce spatial coherence of laser light using a rotating ground glass diffuser (2017) Applied optics 56, 5427-5435
37. A. Rodriguez, H. Zhang, K. Wiklund, T. Brodin, P. Andersson, J. Klaminder, M. Andersson Refining particle positions using circular symmetry (2017) PlosOne 12(4) e0175015
38. B. Singh, N. Mortezaei, SJ. Savarino, BE. Uhlin, E. Bullitt, and M. Andersson Antibodies damage fimbrial resilience, causing them to be stiff and tangled (2017), Journal of Bacteriology 199 (1)
39. O. Björnham, M. Andersson Theory for Nonlinear Dynamic Force Spectroscopy (2017) European Biophysics Journal 46(3) 225-233
40. J. Zakrisson, B. Singh, P. Svenmarker, K. Wiklund, S. Hakobyan, H. Zhang M. Ramstedt, M. Andersson Detecting Bacterial Surface Organelles on Single Cells using Optical Tweezers (2016) Langmuir 10.1021/acs.langmuir.5b03845
41. H. Zhang, K. Wiklund, M. Andersson A fast and robust circle detection method using isosceles triangles sampling (2016) Pattern recognition 54(C) 218-228
42. B. Singh, N. Mortezaei, BE Uhlin, SJ. Savarino, E. Bullitt, and M. Andersson, Antibody-mediated disruption of the mechanics of CS20 fimbriae of enterotoxigenic Escherichia coli (2015) Scientific Reports 5(1) 13678
43. N. Mortezaei, B. Singh, E. Bullitt and M. Andersson, Biomechanical and Structural features of CS2 fimbriae of Enterotoxigenic Escherichia coli (2015) Biophysical Journal 109(7)
44. J. Zakrisson, S. Staffan, M. Andersson Cell shape identification using digital holographic microscopy (2015) Applied Optics 54 (24) 7442-7448
45. Mortezaei N, Epler CR, Shao PP, Shirdel M, Singh B, McVeigh A, Uhlin B, Savarino, SJ., M. Andersson, Bullitt E. Adhesion Pili from Enterotoxigenic Escherichia coli Share Similar Biophysical Properties Despite Their Different Assembly Pathways. Microscopy Microanalysis. 2015 21 (3) 915–916.
46. J. Zakrisson, K. Wiklund, O. Axner, M. Andersson Tethered cells in fluid flows – Beyond the Stokes’ drag force approach (2015) Physical Biology 12(5)
47. J. Zakrisson, K. Wiklund, Martin Servin, O. Axner, Claude Lacoursiere, M. Andersson Rigid multibody simulation of a helix-like structure – The dynamics of bacterial adhesion pili (2015) European Biophysics Journal 44(5)
48. N. Mortezaei, CR. Epler, PP. Shao, M. Shirdel, B. Singh, A. McVeigh, BE Uhlin, SJ. Savarino, M. Andersson, and E. Bullitt, Structure and function of Enterotoxigenic Escherichia coli fimbriae from differing assembly pathways (2015) Molecular Microbiology 95(1)
49. K. Norregaard, M. Andersson, P. Nielsen, S. Brown, L.B. Oddershede, Tethered particle analysis of supercoiled circular DNA using PNA handles (2014) Nature Protocols (9) 2206-2223
50. K. Norregaard, M. Andersson, K. Sneppen, P. Nielsen, S. Brown, L.B. Oddershede, Effect of supercoiling on the lambda switch (2014) Bacteriophage 1
51. N. Mortezaei, B. Singh, E. Bullitt, BE. Uhlin, M. Andersson, Physical properties of the P-fimbriae in presence of anti-PapA antibodies: new insight into the mechanism of antibodies action against pathogens? (2013) Scientific Reports 3
52. K. Norregaard, M. Andersson, K. Sneppen, P. Nielsen, S. Brown, L.B. Oddershede, Supercoiling sharpens the λ-switch. (2013) PNAS (43)110
53. J. Zakrisson, K. Wiklund, O. Axner, M. Andersson, The shaft of the type 1 fimbriae regulates an external force to match the FimH catch bond (2013) Biophysical Journal, 104(10): 2137-2148
54. T. Tjärnhage, Per-Åke Gradmark, Anders Larsson, Abdelsalam Mohammed, Lars Landström, Eva Sagerfors, Per Jonsson, Fredrik Kullander, M. Andersson, Development of a laser-induced breakdown spectroscopy instrument for detection and classification of single-particle aerosols in real-time. (2013) Optics Communications, 296: 106-108
55. J. Zakrisson, K. Wiklund, O. Axner, M. Andersson, Helix-like bio-polymers can act as dampers of force for bacteria in flows Eur. Biophys. J. (2012) 41 (6):551-560
56. M. Andersson, O. Björnham, M. Svantesson, A. Badahdah, B.E. Uhlin, E. Bullitt, A Structural Basis for Sustained Bacterial Adhesion: Biomechanical Properties of CFA/I Pili. Journal of Molecular Biology (2011) 415 (5):918-928
57. M. Castelain, S. Ehlers, J. Klinth, S. Lindberg, M. Andersson, B.E. Uhlin, O. Axner, Fast Uncoiling Kinetics of F1C Pili Expressed by Uropathogenic Escherichia coli are Revealed on a Single Pilus Level using Force-Measuring Optical Tweezers. Eur. Biophys. J. (2011) 40(3):305-16
58. M. Andersson, F. Czerwinski, L.B. Oddershede, Optimizing active and passive optical tweezers calibration. Journal of Optics (2011)13 (4)
59. M. Castelain, A.E. Sjöström, B.E. Uhlin, and M. Andersson, Unfolding and refolding properties of S pili on Extraintestinal pathogenic Escherichia coli. Eur Biophys J. (2010) 39(8):1105-15
60. M. Castelain, E. Koutris, M. Andersson, K. Wiklund, O. Björnham, S. Schedin, and O. Axner Characterization of the Biomechanical Properties of T4 Pili Expressed by Streptococcus pneumoniae-A Comparison between Helix-like and Open Coil-like Pili. ChemPhysChem 10 (9-10) (2009) 1533-1540.
61. O. Björnham, H. Nilsson, M. Andersson, S. Schedin. Physical Properties of the Specific PapG-Galabiose Binding in E. coli P pili-mediated adhesion European Biophysics Journal 38 (2) (2009) 245-254.
62. M. Andersson, O. Axner, F. Almqvist, B.E. Uhlin and E. Fällman, Physical properties of biopolymers assessed by optical tweezers. ChemPhysChem 9 (2) (2008) 221-235.
63. O. Björnham, O. Axner, and M. Andersson, Modeling of the Elongation and Retraction of E. Coli P pili under Strain by Monte Carlo Simulations. Eur. Biophysics J. 37 (4) (2008) 381-391.
64. M. Andersson, B.E. Uhlin and E. Fällman, The biomechanical properties of E. coli pili for urinary tract attachment reflect the host environment. Biophysical Journal 93 (2007) 3008-3014.
65. M. Andersson, E. Fällman, B.E. Uhlin and O. Axner, Dynamic force spectroscopy of the unfolding of P pili. Biophysical Journal 91 (2006) 2717-2725.
66. M. Klein, M. Andersson, O. Axner and E. Fällman, A dual trap technique for reduction of low frequency noise in force measuring optical tweezers. Applied Optics 46 (2006) 405-412
67. M. Andersson, E. Fällman, B.E. Uhlin, and O. Axner: A sticky chain model of the elongation of Escherichia coli P pili under strain. Biophysical Journal 90 (2006) 1521-34.
68. E. Fällman, S. Schedin, J. Jass, M. Andersson, B.E. Uhlin and O. Axner, Optical tweezers based force measurement system for quantitating binding interactions: system design and application for the study of bacterial adhesion. Biosensors and Bioelectronics, 19 (11) (2004) 1429-1437.
Book Chapters
69. C. Epler Babercheck, E. Bullitt and M. Andersson Membrane Protein Complex – Bacterial Adhesion Pili. ed.: J. Robin Harris, Subcellular Biochemistry Springer Verlag 2018
70. O. Axner, M. Andersson, O. Björnham, M. Castelain, J. Klinth, E. Koutris and S. Schedin Assessing Bacterial Adhesion on an Individual Adhesin and Single Pili Level using Optical Tweezers 1st Edition., VIII, 360 p. ISBN: 978-94-007-0939-3 (2011)
71. O. Axner, O. Björnham, M. Castelain, E. Koutris, S. Schedin, E. Fällman, and M. Andersson. Unraveling the Secrets of Bacterial Adhesion Organelles using Single Molecule Force Spectroscopy. Single Molecular Spectroscopy in Chemistry, Physics and Biology, ed.: R. Rigler DOI: 10.1007/978-3-642-02597-6_18 Springer Verlag 2010
Conference contributions
1. Mahnoor Ahmed, Tiago R.D. Costa, Magnus Andersson, Joseph L. Baker Investigation of F pilus dynamics under force and differing temperature environments using molecular simulation
2. M. Doran, T. Dahlberg. J. Baker, M. Andersson, E. Bullitt CS20 bridge the gap between class 1 and class 5 bacterial adhesion pili Biophysical Journal 121(3):168
3. D. Nilsson, R. Öberg, D. Malyshev, T. Dahlberg, K. Wiklund, M Andersson Physicochemical and biophysical characterization of bacteria and spores using laser tweezers SPIE 2022 SI20-SI2
4. R. Öberg, L. Landström, M Andersson, Per Ola Andersson Selective and sensetive detection of VX nerve agent using AChE enzyme incubation and an auto-inductive cascade reaction , SPIE 2022 SI20-SI2
5. J Baker, T Dahlberg, E Bullitt, M Andersson Unveiling the Contributions of Secondary Structure and Disulfide Bonds for Bacterial Adhesion Pili Extension using a Multiscale Approach Biophysical Journal 120 (3), 207a-208a
6. Tobias Dahlgren, Dmitry Malshev, Per Ola Andersson, Magnus Andersson, Biophysical fingerprinting of single bacterial spores using Laser Raman Optical Tweezers, SPIE 2020 SI20-SI2
7. Karen W. Dodson, Matt S. Conover, Fengbin Wang, Pontus Svenmarker, Areli Luna-Rico, Olivera Francetic, Magnus Andersson, Scott J. Hultgren, Edward H. Egelman Cryo-Em Structure of Type 1 Pilus 10.1016/j.bpj.2017.11.2052 2018
8. Bhupender Singh, Johan Zakrisson, Narges Mortezaei, Krister Wiklund, Bernt Eric Uhlin, Esther Bullitt, and Magnus Andersson. Structural and biomechanical comparison of ETEC and UPEC adhesion fimbriae. "Antibiotic resistance; a One Health perspective" 2015
9. K. Norregaard, M. Andersson, P. Nielsen, S. Brown, L.B. Oddershede, DNA Supercoiling Enhances Cooperativity and Efficiency of an Epigenetic Switch, Biophysical Society meeting 2015
10. Narges Mortezaei, Bhupender Singh, Bernt Eric Uhlin, Stephen J. Savarino, Esther Bullitt, and Magnus Andersson Antibodies changes the mechanics of adhesion fimbriae – a case study of CS20 Expressed by enterotoxigenic Escherichia coli, Biophysical Society meeting 2015
11. Narges Mortezaei, Bhupender Singh, Esther Bullitt, Johan Zakrisson, Chelsea Epler, Krister Wiklund and Magnus Andersson Structural and biophysical comparison of UPEC and ETEC adhesion fimbriae, Biophysical Society meeting 2015
12. Johan Zakrisson, Narges Mortezaei, Krister Wiklund, Ove Axner and Magnus Andersson Uncoiling of helix-like pili working as effective shock absorbers, Advances in Single-Molecule Research for Biology & Nanoscience 2012
13. Johan Zakrisson, Narges Mortezaei, Krister Wiklund, Ove Axner and Magnus Andersson Uncoiling of helix-like pili working as effective shock absorbers, DNA dynamics and Life strategies, Copenhagen 2012
14. Castelain, M., M. Andersson, E. Koutris, O. Axner, Helix-like pili is a prerequisite of uropathogenic E. coli to adhere to host and withstand urine flow. European Biophysics Journal, 38 (Suppl 1):S35–S212. DOI: 10.1007/s00249-009-0478-1 (2009)
15. O. Björnham, Erik Fällman, M. Andersson. Monte carlo simulation of the unfolding and refolding mechanics of P pili. ESF-FWF, Trends in Optical Micromanipulation (2009)
16. M. Andersson, O. Axner, B.E. Uhlin and E. Fällman, Optical tweezers for single molecule force spectroscopy on bacterial adhesion organelles. SPIE (2006) 6326-74.
17. M. Andersson, O. Axner, B.E. Uhlin, and E. Fällman Characterization of the mechanical properties of fimbrial structures by optical tweezers. VIII. Annual Linz Winter Workshop. Trauner, Linz, Austria, 2006 ISBN: 3-85499-163-0
18. M. Andersson, O. Axner, B.E. Uhlin, E. Fällman: Optical tweezers system for single molecule force spectroscopy on bacterial adhesion organelles. SPIE (2006) 6326-20.
19. M. Andersson, E. Fällman, B.E. Uhlin, O. Axner: Force measuring optical tweezers system for long time measurements of Pili stability. SPIE (2006) 6088-42.
20. M. Andersson, E. Fällman, B.E. Uhlin, O. Axner: Technique for determination of the number of PapA units in an E Coli P pilus. SPIE (2006) 6088-38
21. E. Fällman, M. Andersson, O. Axner: Techniques for moveable traps influence of aberration in optical tweezers. SPIE (2006) 6088-36.
22. E. Fällman, S. Schedin, J. Jass, M. Andersson, B.E. Uhlin, and O. Axner Physical properties of Escherichia coli P pili measured by optical tweezers. ICBP2004 Göteborg, 2004.
23. E. Fällman, M. Andersson, S. Schedin, J. Jass, B.E. Uhlin, O. Axner: Dynamic properties of bacterial pili measured by optical tweezers. SPIE 5514 (2004) 763-33.
24. E. Fällman, S. Schedin, M. Andersson, J. Jass, O. Axner: Optical tweezers for the measurement of binding forces: system description and application for the study of E. coli adhesion. SPIE 4962 (2003) 206-15
25. M. Andersson, E. Fällman, H. Hedman, and O. Axner, Model System for in Situ Investigation of Binding Strengths of Integrin Mediated Cellular Adhesion. World congress on medical physics and biomedical engineering, Sydney, 24-29 Aug 2003.
26. E. Fällman, S. Schedin, J. Jass, M. Andersson, B. E. Uhlin, and O. Axner, Measurement of Adhesion Forces With Optical Tweezers: System Description And Experimental Verification, World congress on medical physics and biomedical engineering, Sydney, 24-29 Aug 2003.
Patents & Trademarks
27. Arrangement and method for performing movement analysis (PRV 1250416-3)
28. PRV SE 0513184 (Trademark)
Software
ToxTrac https://sourceforge.net/projects/toxtrac/ (>23 000 downloads)