Seminar on Bayesian Computation 

The following schedule is based on Japanese standard time. 

Date: Monday May 13th

Time:  15:00 - 16:00 JST

In person location: ISM D222

Speaker: Kaoru Irie, University of Tokyo

Title: Gibbs sampler for matrix generalized inverse Gaussian distributions

Abstract: Matrix generalized inverse Gaussian (MGIG) distributions are a multivariate extension of the well-known univariate GIG distributions. Typically, the MGIG distributions are obtained as the full conditional posterior distributions of the variance matrix in many multivariate models, such as the location-scale mixture of multivariate normals. Thus, in implementing Markov chain Monte Carlo (MCMC) algorithms for posterior inference, simulation from the MGIG distributions is required. However, an efficient sampling scheme for the MGIG distributions has not been fully developed. In this study, we propose a novel blocked Gibbs sampler for the MGIG distributions based on the Cholesky decomposition. We show that the full conditionals of the entries of the diagonal and unit lower-triangular matrices are univariate GIG and multivariate normal distributions, respectively. Several variants of the Metropolis-Hastings algorithm can also be considered for this problem, but we mathematically prove that the average acceptance rates become extremely low in particular scenarios. We demonstrate the computational efficiency of the proposed Gibbs sampler through simulation studies and data analysis. This is joint work with Yasuyuki Hamura (Kyoto) and Shonosuke Sugasawa (Keio).

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Physical: https://forms.gle/XMAMc4WMCdXXXyKX8

Virtual: https://us06web.zoom.us/meeting/register/tZYucOChrTwuE9H8rMRgZ9a0Yw596TppqGtt

 Date: Monday Apr 22nd

Time: 15:00 - 16:00 JST

In person location: ISM D222

Speaker: 奥戸 道子, 東大情報理工/ Michiko Okudo, University of Tokyo

Title: 事後平均とMAP推定量を漸近的に一致させる matching prior pair

Abstract: ベイズ法に現れる推定量の性質や情報幾何との関連について、最近得られた結果[1]を紹介する。

MAP推定量と事後平均はベイズ法でよく用いられる推定量であるが、本研究ではこの2つが漸近的に一致する事前分布のペアを求める。

ペアの密度が満たす条件を導出し、情報幾何でα-平坦と呼ばれるクラスのモデルでは条件が簡単な形で書けることを紹介する。

指数型分布族や一般化線形モデルを含むいくつかの解析的な例と数値例を紹介する。

この研究は統計数理研究所の矢野恵佑氏との共同研究である。

ベイズ法と情報幾何に関する講演者のこれまでの研究の概観も紹介する予定である。

参考文献:

[1] M. Okudo & K. Yano (2023). Matching prior pairs connecting Maximum A Posteriori estimation and posterior expectation. arXiv preprint arXiv:2312.09586.

参加希望の方はフォームに登録をお願いします.Kindly register by using the links provided below.

本発表は日本語で開催します.This presentation will be held in Japanese. 

Physical https://forms.gle/WwGq8r6ZALkvXNX5A

Virtual https://us06web.zoom.us/meeting/register/tZEtd-mvrjssHtZpbB3kzKRobbkrySP_9WMs

Date: Monday Mar 18th

Time: 13:00 - 14:00 JST

In person location: RIKEN Center for Brain Science, Central Building, C202

Speaker: Omar Chehab, ENSAE-CREST

Title: Provable benefits of annealing for estimating normalizing constants: Importance Sampling, Noise-Contrastive Estimation, and beyond

Abstract: Recent research has developed several Monte Carlo methods for estimating the normalization constant (partition function) based on the idea of annealing. This means sampling successively from a path of distributions that interpolate between a tractable "proposal" distribution and the unnormalized "target" distribution. Promi- nent estimators in this family include annealed importance sampling and annealed noise-contrastive estimation (NCE). Such methods hinge on a number of design choices: which estimator to use, which path of distributions to use and whether to use a path at all; so far, there is no definitive theory on which choices are efficient. Here, we evaluate each design choice by the asymptotic estimation error it produces. First, we show that using NCE is more efficient than the importance sampling esti- mator, but in the limit of infinitesimal path steps, the difference vanishes. Second, we find that using the geometric path brings down the estimation error from an exponential to a polynomial function of the parameter distance between the target and proposal distributions. Third, we find that the arithmetic path, while rarely used, can offer optimality properties over the universally-used geometric path. In fact, in a particular limit, the optimal path is arithmetic. Based on this theory, we finally propose a two-step estimator to approximate the optimal path in an efficient way.

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Physical: https://forms.gle/7nhDTSeJokNdVx8a9

Virtual: https://us06web.zoom.us/meeting/register/tZ0td-GrrjorHt0YpnLKQuqPLxd3lsFgopFb

Date: Thursday Mar 7th

Time: 11:00 - 12:00 JST

In person location: Seminar Room B, 3rd Floor, Building No. 6, Faculty of Engineering, Hongo Campus, University of Tokyo

Speaker: Prof. Arnaud Doucet/ Oxford University & Google Deep Mind

Title: Ensemble Rejection Sampling

Abstract: We introduce Ensemble Rejection Sampling, a scheme for exact simulation from the posterior distribution of the latent states of a class of non-linear non-Gaussian state-space models. Ensemble Rejection Sampling relies on a proposal for the high-dimensional state sequence built using ensembles of state samples. Although this algorithm can be interpreted as a rejection sampling scheme acting on an extended space, we show, under regularity conditions, that the expected computational cost to obtain an exact sample increases cubically with the length of the state sequence instead of exponentially as in standard rejection sampling. We demonstrate this methodology by sampling exact state sequences according to the posterior distribution of a stochastic volatility model and a cell model. We also present an application to rare event simulation. 

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Physical: https://forms.gle/oFNDwoGvwD6WtZAM8

Virtual: https://us06web.zoom.us/meeting/register/tZAtdOGopjgvE9QR0urNFDTxMKMxSyuwWGQ8