Check out my google scholar page.
A. Kulshrestha, S. N. Punnathanam, K. G. Ayappa, "Finite temperature string method with umbrella sampling using path collective variables: Application to secondary structure change in a protein” Soft Matter (2022), 18 (39), 7593-7603.
A. Kulshrestha, S. Maurya, T. Gupta, R. Roy, S. N. Punnathanam, K. G. Ayappa, "Conformational flexibility is a key determinant for the lytic activity of the pore-forming protein, Cytolysin A” J. Phys. Chem. B (2023), 127 (1), 69-84.
A. Kulshrestha, S. N. Punnathanam, R. Roy, K. G. Ayappa, (2023), "Cholesterol catalyzes unfolding in membrane inserted motifs of the pore forming protein cytolysin A” Bio. J. (2023), 122 (20), 4068-4081. (Selected for the cover page)
A. Kulshrestha, Ph.D. Thesis, (2023) "Computational study of membrane driven secondary structural changes in proteins"
A. Kulshrestha, T. M. Phan, A. Rizuan, P. Mohanty, J. Mittal, "Multiscale simulations elucidate the mechanism of polyglutamine aggregation and the role of flanking domains in fibril polymorphism" BioRxiv (2025) - (under review)
A. Kulshrestha, Nishant Mohan Bahuguna, S. N. Punnathanam, K. G. Ayappa, (2025), "Preferential binding of cardiolipin with N-terminus of CM15 influences the membrane insertion of the antimicrobial peptide" (under preparation)
Feel free to write to me at avijeetkulshrestha@gmail.com if you want a personal copy of any paid publication. The codes used in the publications are on GitHub, along with the tutorials.