Selected Publications

- Eulgem, T., Rushton, P. J., Schmelzer, E., Hahlbrock, K., Somssich, I. E.  1999, “Early nuclear events in plant defence signalling: rapid gene activation by WRKY transcription factors”. EMBO J.  18: 4689-99. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1171542/

- Eulgem, T., Rushton, P. J., Robatzek, S., Somssich, I. E.  2000, “The WRKY superfamily of plant transcription factors”. Trends Plant Sci. 5: 199-206. https://pubmed.ncbi.nlm.nih.gov/10785665/

- Maleck, K., Levine, A., Eulgem, T., Morgan, A., Schmid, J., Lawton, K. A., Dangl, J. L., Dietrich, R. A.  2000,  “The transcriptome of Arabidopsis thaliana during systemic acquired resistance”. Nature Genetics 26: 403-10. https://pubmed.ncbi.nlm.nih.gov/11101835/

- Nimchuk, Z., Eulgem, T., Holt B.F. III, and Dangl, J.L., 2003, “Recognition and response in the plant immune system”. Annual Reviews in Genetics, 37: 579-609.

https://pubmed.ncbi.nlm.nih.gov/14616074/

- Eulgem T, Weigman VJ, Chang HS, McDowell JM, Holub EB, Glazebrook J, Zhu T, Dangl JL. 2004, “Gene expression signatures from three genetically separable resistance gene signaling pathways for downy mildew resistance”. Plant Physiology 135: 1129-44.

http://www.plantphysiol.org/content/135/2/1129

- Eulgem, T. 2005, “Regulation of the Arabidopsis Defense Transcriptome”. Trends in Plant Sciences, 10: 71-78; T. Eulgem is corresponding author

https://www.sciencedirect.com/science/article/pii/S1360138504002778

- Knoth, C. Ringler, J. Dangl., J.L., Eulgem, T. 2007, “Arabidopsis WRKY70 is required for full RPP4-mediated disease resistance and basal defense against Hyaloperonospora parasitica”. Molecular Plant Microbe Interactions, 20: 120-128. T. Eulgem is corresponding author

https://pubmed.ncbi.nlm.nih.gov/17313163/

- Eulgem, T., Tsuchiya, T., Wang, X.-J., Beasley, B., Cuzick, A., Tör, M., Zhu, T, McDowell, J.M., Holub, E. & Dangl, J.L. 2007, “EDM2 is a novel component of RPP7-dependent disease resistance in Arabidopsis that affects RPP7 transcript levels”. The Plant Journal, 49 (5): 829–839; T. Eulgem is corresponding author

https://pubmed.ncbi.nlm.nih.gov/17253987/

- Eulgem, T. & Somssich, I.E. 2007, “Networks of WRKY transcription factors in defense signaling”. Current Opinion in Plant Biology, 10: 366-371. T. Eulgem is co-corresponding author

https://www.sciencedirect.com/science/article/pii/S1369526607000751

- Knoth, C. & Eulgem, T. 2008, “The oomycete response gene LURP1 is required for defense against Hyaloperonospora parasitica in Arabidopsis thaliana”. The Plant Journal, 55: 53-64; T. Eulgem is corresponding author

https://pubmed.ncbi.nlm.nih.gov/18346188/

- Evrard, A., Ndatimana, T., Eulgem, T. 2009, “FORCA, a promoter element that responds to crosstalk between defense and light-signaling”. BMC Plant Biology. 9: doi:10.1186/1471-2229-9-2; T. Eulgem is corresponding author

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2640394/

- Knoth, C., Salus, M.S., Girke, T., Eulgem, T. 2009, “The Synthetic Elicitor 3,5-Dichloroanthranilic Acid Induces NPR1-Dependent and NPR1-IndependentMechanisms of Disease Resistance in Arabidopsis”. Plant Physiology. 150: p.333-347

        T. Eulgem is corresponding author

http://www.plantphysiol.org/content/150/1/333

- Tsuchiya T, Eulgem T. 2010, “The Arabidopsis defense component EDM2 affects the floral transition in an FLC-dependent manner”. The Plant Journal. 62: 518-28.

        T. Eulgem is corresponding author

https://onlinelibrary.wiley.com/doi/full/10.1111/j.1365-313X.2010.04169.x

- Bhattarai KK,  Atamian HS, Kaloshian I, Eulgem T. 2010, “WRKY72-type transcription factors contribute to basal immunity in tomato and Arabidopsis as well as gene-for-gene resistance mediated by the tomato R gene Mi-1”. The Plant Journal 63: 229-40.

        T. Eulgem is co-corresponding author with I.K

https://pubmed.ncbi.nlm.nih.gov/20409007/

- Tsuchiya T, Eulgem T. 2010, “Co-option of EDM2 to distinct regulatory modules in Arabidopsis thaliana development”. BMC Plant Biology 10: 203. T. Eulgem is corresponding author

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2956552/

- Tsuchiya T, Eulgem T. 2011, “EMSY-like genes are required for full RPP7-mediated race specific immunity and basal defense in Arabidopsis”. Molecular Plant Microbe Interactions, 24: 1573–1581 T. Eulgem is corresponding author

        https://pubmed.ncbi.nlm.nih.gov/21830950/

- Tokuji Tsuchiya & Thomas Eulgem. 2013, “Mutations in EDM2 selectively affect silencing states of transposons and induce plant developmental plasticity”. Scientific Reports, 3: 1701 T. Eulgem is corresponding author

https://www.nature.com/articles/srep01701

- Tokuji Tsuchiya & Thomas Eulgem. 2013, “An alternative polyadenylation mechanism coopted to the Arabidopsis RPP7 gene through intronic retrotransposon domestication”. Proc Natl Acad Sci USA, 110:E3535–E3543. T. Eulgem is corresponding author

https://www.pnas.org/content/110/37/E3535.long

- Tokuji Tsuchiya & Thomas Eulgem. 2013, “The PHD-finger module of the Arabidopsis thaliana defense regulator EDM2 can recognize triply modified histone H3 peptides”. Plant Signal Behav. 9. pii: e29202. T. Eulgem is corresponding author

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4203584/

- Bektas, Yasemin; Eulgem, Thomas, 2015,  “Synthetic plant defense elicitors”, FRONTIERS IN PLANT SCIENCE 5, article 804, T. Eulgem is corresponding author

https://www.frontiersin.org/articles/10.3389/fpls.2014.00804/full

- Schroeder, Mercedes, Tsuchiya, Tokuji, He, Shuilin and Eulgem, Thomas, 2016, “Use of enhancer trapping to identify pathogen-induced regulatory events spatially restricted to plant–microbe interaction sites”, Molecular Plant Pathology, 17: 388-397; T. Eulgem is corresponding author

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6638459/

- Melinda Rodriguez-Salus, Yasemin Bektas, Mercedes Schroeder, Colleen Knoth, Trang Vu, Philip Roberts, Isgouhi Kaloshian and Thomas Eulgem, 2016, “The synthetic elicitor BHTC (2-(5-bromo-2-hydroxy-phenyl)-thiazolidine-4-carboxylic acid) links plant immunity to hormesis”, Plant Physiology 170, 444–458, T. Eulgem is co-corresponding author with Y.B

http://www.plantphysiol.org/content/170/1/444

- Yasemin Bektas, Melinda Rodriguez-Salus, Mercedes Schroeder, Adilene Gomez, Isgouhi Kaloshian, Thomas Eulgem, 2016, "The Synthetic Elicitor DPMP (2,4-dichloro-6-{(E)-[(3-methoxyphenyl)imino]methyl}phenol) Triggers Strong Immunity in Arabidopsis thaliana and Tomato”, Scientific Reports 6:29554, T. Eulgem is corresponding author

https://www.nature.com/articles/srep29554

- Yan Lai and Thomas Eulgem, 2017, “Transcript-level expression control of plant NLR genes” Molecular Plant Pathology, DOI: 10.111/mpp.12607; T. Eulgem is corresponding author

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6638128/

- Yan Lai, Alayne Cuzick, Xueqing M. Lu, Jianqiang Wang, Neerja Katiyar, Tokuji Tsuchiya, Karine Le Roch, John M. McDowell, Eric Holub and Thomas Eulgem; 2018 “The Arabidopsis RRM domain protein EDM3 mediates race-specific disease resistance by controlling H3K9me2 dependent alternative polyadenylation of RPP7 immune receptor transcripts”, The Plant Journal 97: 646-660, T. Eulgem is corresponding author

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7138032/

- Mercedes M. Schroeder, Yan Lai, Miwa Shirai, Natalie Alsalek, Tokuji Tsuchiya, Philip Roberts & Thomas Eulgem 2019, “A novel Arabidopsis pathosystem reveals cooperation of multiple hormonal response-pathways in host resistance against the global crop destroyer Macrophomina phaseolina” Scientific Reports 9:20083 | T. Eulgem is corresponding author

https://doi.org/10.1038/s41598-019-56401-2

- Yan Lai, Xueqing (Maggie) Lu, Josquin Daron, Songqin Pan, Jianqiang Wang, Wei Wang, Tokuji Tsuchiya, Eric Holub, John M. McDowell, R. Keith Slotkin, Karine Le Roch and Thomas Eulgem, 2020, “The Arabidopsis PHD-finger protein EDM2 has multiple roles in balancing NLR immune receptor gene expression”, PLOS Genetics, 16(9): e1008993. https://doi.org/10.1371/journal. pgen.1008993; T. Eulgem is co-corresponding author with Karine Le Roch

- Jianqiang Wang and Thomas Eulgem, 2023, “The Arabidopsis RRM domain proteins EDM3 and IBM2 coordinate the floral transition and basal immune responses” The Plant Journal 116, 128–143, T. Eulgem is corresponding author

- Miwa Shirai and Thomas Eulgem, 2023, “Molecular interactions between the soilborne pathogenic fungus Macrophomina phaseolina and its host plants” Front. Plant Sci. 14:1264569. doi: 10.3389/fpls.2023.1264569, T. Eulgem is corresponding author

- Jianqiang Wang and Thomas Eulgem, 2024, Growth deficiency and enhanced basal immunity in Arabidopsis thaliana mutants of EDM2, EDM3 and IBM2 are genetically interlinked. PLoS ONE 19(2): e0291705. https://doi.org/10.1371/journal.pone.0291705, T. Eulgem is corresponding author