Main research projects

Last update: Dec 2023

bioDEERversity

The bioDEERversity project is looking at the effects of deer on biodiversity in the the Wicklow/Dublin mountains where sika deer have reached the highest relative density in Ireland. This project is looking at the effects of deer on soil ecology (both biotic and abiotic components, including invertebrates, fungi and bacteria), plant communities and diversity, mammal diversity (via camera traps), and bird diversity (via sound recorders) by comparing areas with varying density of sika deer. 

Project team: Simone Ciuti, Virginia Morera-Pujol, Tancredi Caruso, Adam Smith, Colin Brock and Kilian Murphy. 

This project is involving many deer stakeholders (hunters, farmers, foresters, landowners, government agencies, citizens) who are key to the success of any initiatives of this kind. Colin Brock is the key player in this project and results will be released soon.

Deer and badgers: disentangling the role of wildlife on bovine tuberculosis maintenance and outbreaks in cattle. 

We are running a number of projects to understand bovine TB dynamics in wildlife and how land use change and wildlife management may affect the maintenance of the disease in the wild, and whether and how this is linked to outbreaks in farms and their cattle. 

Virginia Morera-Pujol is building multi-hierarchical Bayesian models to predict badger distribution and density across Ireland, and aims at understanding how badger body condition and localized abundance may be linked to greater likelihood of bTB occurrence and spread. 

Kilian Murphy is currently building Agent Based Models to simulate badger movement and predict contact rates with cattle under different climate change, land use change, and wildlife management scenarios.   

We strive to extend our knowledge of wildlife hosts and study their role in Tb breakdowns at the landscape level by considering relevant climate factors and land-use characteristics and change. We wish to collaborate with current work being undertaken at the herd level of Tb transmission and complete a comprehensive risk analysis for Tb breakdown factors from individual animals to landscape ecology in a multi-host system. One question remains unanswered: what is the role of deer (if any) on bTB dynamics in Ireland? We are working to tackle this very important gap in knowledge.

SMARTDEER

Our project has been developed to work with stakeholders, for stakeholders. We have been leading the first nationally-coordinated initiative of deer in Ireland by collecting and analyzing empirical data across the country, helping managers to take evidence-based decisions. Prior to SMARTDEER, neither the up-to-date precise distribution nor the population density of the three main species of deer was currently known, and no national coordination in the collection of deer data existed. Recent advances with technologies such as smartphone applications or digital deer mapping surveys were never used for Irish deer before, and our project filled these gaps in by introducing tools that will allow national deer monitoring on real time. 

This project is officially concluded in terms of funding and key results have been communicated via peer-reviewed publications, seminars, popular articles, but the project is very much alive: we are analysing more data and producing new results that will stir deer management and conservation in Ireland. 

You can find quick facts about and the results of our project in the dedicated SMARTDEER website. 

 Deer behavioural ecology and human-wildlife conflict in the Phoenix Park, Dublin

The research projects we are running in the Phoenix Park are cutting edge, original, and are meant to change the way we monitor, observe, manage and conserve wildlife. Lessons learnt have the potential to stir wildlife monitoring and management in completely different ecological contexts across the globe. For instance, we are developing novel approaches to estimate body size, weight, horn, and antler size in large herbivores using non-invasive remote photogrammetry, i.e. the extraction of real-world measurements from photographic data.  Students involved in the fallow deer research are testing recent advances with technology, dealing with new wildlife-human conflicts arising in urban areas, and measuring behaviour in deer at a resolution never attempted before.  Here we are training the next generation of wildlife biologists and managers. We have set up the scene for a fascinating longitudinal study on fallow deer, with more than 85% of deer of the population individually identifiable by unique colour-coded ear tags. We have several research projects, including projects such as linking animal personality to life history, distance sampling in peri-urban areas, and more. We are carrying out the first empirical study aimed at understanding the effects of tourists feeding the deer on their ecology and behaviour. We have been testing the efficacy of a number of management actions aimed at minimizing the issue, generating a new approach on how to deal with human-wildlife feeding interactions. 

Fox in the City, Fox in the Hill

We have two new projects on fox movement ecology up and running.

The first one - fox in the hill - is carried out in collaboration with ATC-Massa and Dr. Paolo Bongi to monitor foxes in the Tuscany hills of Lunigiana. The goal of the project is to depict fox hunting strategies in relation to prey density and availability.

The second fox project - fox in the city - is currently ongoin in Dublin in collaboration with Dublin City Council. The goal of this project is to understand fox foraging ecology along a gradient going from Dublin city center to its suburbs. 

Both studies led by Holly English are deploying recent advances with biologging, namely high-frequency accelerometers, magnetometers, and GPS transmitters, leading to the collection of the most accurate data describing fox hunting behaviour within and outside urban areas ever attempted before. 

Social networks in animal societies

Kim Conteddu, Prabhleen Kaur, both co-supervised by Micheal Salter-Townshend and Simone Ciuti, are developing new tools to estimate social networks in animal societies and unleash the use of this type of analysis to tackle fundamental questions of the 21st century: effect of human perturbations, land-use and climate change on animal sociality and consequences in epidemiology and zoonotic disease spread. Prabhleen just published her R new package aniSNA, and both Kim and Prabhleen are defining novel protocols that can be used by ecologists to depict the social networks of entire natural populations using relatively small sample sizes (e.g., a subset individuals monitored using satellite telemetry). 

Movement ecology and social networks of the desert-dwelling giraffe in Namibia 

By means of direct behavioural observations combined with satellite telemetry, we have been working on the movement ecology and the social behaviour of the Angolan Giraffe in the Namib desert. The goal of this project is to collect empirical data to support the next steps in giraffe conservation in Africa.  New students are joining this effort: stay tuned for new peer-reviewed publications produced by this work carried out in collaboration with Giraffe Conservation Foundation

Emma Hart's documentary on her study can be previewed here: link.

Ecology of large predators across human-dominated European landscapes 

Using a combination of camera trapping and satellite radio-tracking, Matteo Bastianelli and Adam Smith - both co-supervised by Simone Ciuti and Marco Heurich -  are looking at space use, habitat selection, movement behaviour in predators (e.g. Lynx, wolf, fox) and prey (e.g. deer, wild boar), their inter-species interactions as well as their response to human pressures. 

MammalNet-Ireland, SNAPSHOT EUROPE, citizen science, and EUROMAMMALS

We are leading MammalNet-Ireland, an initiative in collaboration with: Dr. Phil Stephens at Durham University, UK, MammalWeb, and MammalNet. MammalNet-Ireland is a subproject under the umbrella of MammalNet, a project aimed at assessing the potential of voluntary citizen involvement for mammal monitoring across Europe. MammalNet-Ireland aims to involve the people of Ireland in what is likely to become the most widespread citizen-science project across Europe. MammalWeb-Ireland, specifically, has the goal to connect the different mammal stakeholders across the whole island of Ireland, helping us to catalogue Irish mammalian biodiversity, and to understand what species are around us, where they occur, and what aspects of the environment impact on their occurrence and activity. 

Adam Smith, Colin Brock, and Simone Ciuti are leading the Irish chapter of SNAPSHOT EUROPE.  Snapshot Europe is a coordinated and standardized camera trap effort to collect data on mammals across Europe. The initiative is supported by Euromammals and the Max Planck Institute of Animal Behaviour, in partnership with Snapshot USA. See also here for more info on Snapshot-Europe/Ireland.

Citizen science allows everybody to get involved in helping to protect our biodiversity. In collaboration with Dr. Emma Hart, we’re busy developing simple citizen science protocols that will help people to more easily record and monitor wildlife in their communities.

We are active members of the euromammals / eurodeer / euroboar networks and researchers in the lab  participate to various projects under the euromammals umbrella. 

Some of our former projects

Montane elk research program in the Canadian Rockies

One of the largest satellite telemetry studies in the world, we tracked North American elk and its main predators (humans, grizzly bears, wolves, and cougars). This research has had multiple goals including the study of the effects of human pressures on elk behaviour and ecology. In collaboration with: Prof. Mark Boyce, University of Alberta, Canada. Dr. Henrik Thurfjell, Swedish Species Information Centre. Jeremy Banfield, MSc, Pennsylvania Game Commission, USA. Prof. Marco Musiani, University of Calgary, Canada. Project website: link.

Most recent results published here.

Mule deer population dynamics and predator-prey interactions in the North Dakota Badlands, USA.

This study has been targeting the mule deer population dynamics in an area of North Dakota heavily affected by decades of oil and gas extraction, including recent massive fracking operations to extract oil from the Bakken formation. In collaboration with: Prof. Mark Boyce, University of Alberta, Canada. Dr. William Jensen, North Dakota Game and Fish Department. Prof. Carsten Dormann, University of Freiburg, Germany.

Most recent results published here.

Fallow deer behavioural ecology in San Rossore, Italy.

We have been studying feeding ecology, sexual segregation, and mating behaviour in the lekking fallow deer population of San Rossore, Italy for over 20 years. This project started in the mid-1990s but still has stories to tell about male mating success in a lek (mating arena). 

Most recent results published here.

River dolphin monitoring in Tocatins, Brazil

Wildlife conservation and management of wildlife in the Cantão State Park (IUCN category II), State of Tocantins, Central Brazil. Our last work there contributed to test a new aerial counting method for river dolphins. In collaboration with the Araguaia NGO

Final results published here.

Orangutan reintroduction monitoring program, Sumatra

We have been working closely with researchers of the University of Freiburg, Germany, to assess the behaviour of reintroduced Orangutans at the Frankfurt Zoological Society (FZS) station located in the Bukit Tigapuluh ecosystem, Jambi and Riau provinces, Central Sumatra, Indonesia

Final results published here.