Peer-reviewed publications
Last update: Jan 2024
All manuscripts ready for submission are now regularly preprinted on biorxiv or any similar pre-printing service. To read our most recent research (not yet published in a peer-reviewed journal), please check https://www.biorxiv.org/ and search for any of the current or past lab members. Open access is the option preferred, when possible and funding is available. R codes and data are made available to readers via open access repositories or attachments to the peer-reviewed publications. If you wish to access the data of some of our publications, please contact us.
2024
Advances in biologging can identify nuanced energetic costs and gains in predators.
Holly M English, Luca Börger, Adam Kane, Simone Ciuti.
Movement Ecology in press
Zoonotic disease classification in wildlife: a theoretical framework for researchers.
Keenan, S., Niedziela, D., Morera-Pujol, V., Franklin, D., Murphy, K. J., Ciuti, S., & McMahon, B. J.
Badger ecology, bovine tuberculosis, and population management: lessons from Ireland
Andrew W. Byrne, Adrian Allen, Simone Ciuti, Eamonn Gormley, David J. Kelly, Nikki J. Marks, Nicola Marples, Fraser Menzies, Ian Montgomery, Chris Newman, Maria O’Hagan, Neil Reid, David M. Scantlebury, Peter Stuart, Ming-shan Tsai.
Transboundary and Emerging Diseases (in press)
2023
Predicting forest damage using relative abundance of multiple deer species and national forest inventory data.
Brock, C., Morera-Pujol, V., Murphy, K. J., Nieuwenhuis, M., & Ciuti, S.
A scoping review of the scientific evidence base for rewilding in Europe.
Hart, E. E., Haigh, A., & Ciuti, S.
Bayesian areal disaggregation regression to predict wildlife distribution and relative density with low-resolution data
Kilian J Murphy, Simone Ciuti, Tim Burkitt, Virginia Morera-Pujol
How can we tackle interruptions to human–wildlife feeding management? Adding media campaigns to the wildlife manager's toolbox.
Griffin, L. L., Nolan, G., Haigh, A., Condon, H., O'Hagan, E., McDonnell, P., Kane, A., Ciuti, S.
Should we feed wildlife? A call for further research into this recreational activity.
Griffin, L. L., & Ciuti, S.
Mule deer fawn recruitment dynamics in an energy disturbed landscape
Kilian Murphy, David Roberts, William Jensen, Scott Nielsen, Sandra Johnson, Brian Hosek, Bruce Stillings, Jesse Kolar, Mark Boyce, Simone Ciuti
Does artificial feeding impact neonate growth rates in a large free-ranging mammal?
Laura L. Griffin, Amy Haigh, Bawan Amin, Jane Faull, Fiachra Corcoran, Connie Baker-Horne, Simone Ciuti
Bayesian species distribution models integrate presence-only and presence–absence data to predict deer distribution and relative abundance
V Morera-Pujol, PS Mostert, KJ Murphy, T Burkitt, B Coad, BJ McMahon, M Nieuwenhuis, K Morelle, AI Ward, S Ciuti
Ecography (2)
Ecography Editor's choice
2022
Quiet islands in a world of fear: Wolves seek core zones of protected areas to escape human disturbance
Adam F Smith, Simone Ciuti, Dmitry Shamovich, Viktar Fenchuk, Barbara Zimmermann, Marco Heurich
Biological Conservation (276)
Displacement Effects of Conservation Grazing on Red Deer (Cervus elaphus) Spatial Behaviour
Fabio Weiss, Frank Uwe Michler, Benjamin Gillich, Jörg Tillmann, Simone Ciuti, Marco Heurich, Siegfried Rieger
Environmental management (70) 763-779
Applied autoethnography: A method for reporting best practice in ecological and environmental research
Kilian J Murphy, Laura L Griffin, Grace Nolan, Amy Haigh, Tamara Hochstrasser, Simone Ciuti, Adam Kane
Journal of Applied Ecology 59(11) 2688-2697
related blog: link
Wildlife feeding activities induce papillae proliferation in the rumen of fallow deer
Deirdre McLaughlin, Laura L Griffin, Simone Ciuti, Gavin Stewart
Mammal Research 67(4) 525-530
Risk-taking neonates do not pay a survival cost in a free-ranging large mammal, the fallow deer (Dama dama)
Bawan Amin, Laura Verbeek, Amy Haigh, Laura L Griffin, Simone Ciuti
Neonate personality affects early-life resource acquisition in a large social mammal
Bawan Amin, Dómhnall J Jennings, Alison Norman, Andrew Ryan, Vasiliki Ioannidis, Alice Magee, Hayley-Anne Haughey, Amy Haigh, Simone Ciuti
Behavioral Ecology 33(5) 1025-1035
Habitat availability alters the relative risk of a bovine tuberculosis breakdown in the aftermath of a commercial forest clearfell disturbance
Kilian J Murphy, Virginia Morera‐Pujol, Eoin Ryan, Andrew W Byrne, Philip Breslin, Simone Ciuti
Journal of Applied Ecology 59(9) 2333-2345
related blog: link
Artificial selection in human‐wildlife feeding interactions
Laura L Griffin, Amy Haigh, Bawan Amin, Jordan Faull, Alison Norman, Simone Ciuti
Journal of Animal Ecology 91(9) 1892-1905
related blog: link
Reducing risky interactions: Identifying barriers to the successful management of human–wildlife conflict in an urban parkland
Laura L Griffin, Amy Haigh, Kimberly Conteddu, Maverick Andaloc, Paul McDonnell, Simone Ciuti
People and Nature 4(4) 918-930
Disturbance Ecology Meets Bovine Tuberculosis (bTB) Epidemiology: A Before-and-After Study on the Association between Forest Clearfelling and bTB Herd Risk in Cattle Herds
Andrew W Byrne, Damien Barrett, Philip Breslin, James O’Keeffe, Kilian J Murphy, Kimberly Conteddu, Virginia Morera-Pujol, Eoin Ryan, Simone Ciuti
Pathogens 11(7)
Livestock displace European mouflon from optimal foraging sites
Francesca Brivio, Simone Ciuti, Anna Pipia, Stefano Grignolio, Marco Apollonio
Static and dynamic methods in social network analysis reveal the association patterns of desert-dwelling giraffe
Emma E Hart, Simone Ciuti, Leticia Herrmann, Julian Fennessy, Emma Wells, Michael Salter-Townshend
Behavioral Ecology and Sociobiology 76(5) 62
Camera trap surveys can reveal the dynamics of deer “hotspots” in Ireland
AF Smith, C Brock, K Conteddu, LL Griffin, C Hynes, KJ Murphy, S Ciuti
The Wildlife Techniques Manual, Nova J. Silvy (Ed.), Volume 1 “Research” 759 pages, Volume 2 “Management” 614 pages, 8th Edition, John Hopkins University Press, Baltimore (2020), ISBN 978-1421436692, € 163 - Book Review
Kilian J Murphy, Simone Ciuti
Basic and Applied Ecology (59) 1:3
2021
Roads constrain movement across behavioural processes in a partially migratory ungulate
Gioele Passoni, Tim Coulson, Nathan Ranc, Andrea Corradini, Marck Hewison, Simone Ciuti, Benedikt Gehr, Marco Heurich, Falko Brieger, Robin Sandfort, Atle Mysterud, Niko Balkenhol, Francesca Cagnacci
Movement Ecology 9, 57
On the need for rigorous welfare and methodological reporting for the live capture of large carnivores: A response to de Araujo et al. (2021).
Anthony Caravaggi,Talita F. Amado,Ryan K. Brook,Simone Ciuti,Chris T. Darimont,Marine Drouilly,Holly M. English,Kate A. Field,Graziella Iossa,Jessica E. Martin,Alan G. McElligott,Alireza Mohammadi,Danial Nayeri,Helen M. K. O’Neill,Paul C. Paquet,Stéphanie Périquet,Gilbert Proulx,Daniella Rabaiotti,Mariano R. Recio,Carl D. Soulsbury,Tamara Tadich,Rae Wynn-Grant
Methods in Ecology and Evolution 12(10) 1793-1799
related blog: link
In utero accumulated steroids predict neonate anti‐predator response in a wild mammal
Bawan Amin, Dómhnall J. Jennings, Adam F. Smith, Matthew Quinn, Srivats Chari, Amy Haigh, Devorah Matas, Lee Koren, Simone Ciuti
Functional ecology 35(6) 1255-1267
related blog: link
Seasonal shifts in sociosexual behaviour and reproductive phenology in giraffe
Emma E. Hart, Julian Fennessy, Emma Wells & Simone Ciuti
Behavioral Ecology and Sociobiology 75 (15)
Remote, non‐invasive photogrammetry for measuring physical traits in wildlife
A. F. Smith P. Bongi S. Ciuti
Journal of Zoology 313 (4): 250-262
related blog: link
2020
An introduction to agent‐based models as an accessible surrogate to field‐based research and teaching
KJ Murphy, S Ciuti, A Kane
Ecology and Evolution 10 (22): 12482 - 12498
Cougar roadside habitat selection: Incorporating topography and traffic
JE. Banfield, S. Ciuti, CC. Nielsen, MS. Boyce
Global Ecology and Conservation 23: e01186
Precision and performance of an 180g solar-powered GPS device for tracking medium to large-bodied terrestrial mammals
EE. Hart, J. Fennessy, HB. Rasmussen, M. Butler-Brown, AB. Muneza, S. Ciuti
Wildlife Biology wlb.00669
Intensity of giraffe locomotor activity is shaped by solar and lunar zeitgebers.
EE.Hart, J. Fennessy, S. Hauenstein, S. Ciuti
Behavioural Processes 178: 104178
Evolution of ungulate mating systems: integrating social and environmental factors.
R. Terry Bowyer, Dale R. McCullough, Janet L. Rachlow, Simone Ciuti, Jericho C. Whiting
Ecology and Evolution 10 (11): 5160- 5178
Stay home, stay safe - site familiarity reduces predation risk in a large herbivore in two contrasting study sites.
Gehr, Benedikt; Bonnot, Nadège; Heurich, Marco; Cagnacci, Francesca; Ciuti, Simone; Hewison, Mark; Gaillard, Jean-Michel; Ranc, Nathan; Permier, Joe; Vogt, Kristina; Hofer, Elizabeth; Ryser, Andreas; Vimercati, Eric; Keller, Lukas.
Journal of Animal Ecology 89 (6): 1329 - 1339
Fear of the dark? Contrasting impacts of humans vs lynx on diel activity of roe deer across Europe.
Bonnot, Nadège; Couriot, Ophélie; Berger, Anne; Cagnacci, Francesca; Ciuti, Simone; De Groeve, Johannes; Gehr, Benedikt; Heurich, Marco; Kjellander, Petter; Kröschel, Max; Morellet, Nicolas; Soennichsen, Leif; Hewison, Mark.
Journal of Animal Ecology 89 (1): 132- 145
Habitat heterogeneity and social factors drive behavioral plasticity in giraffe herd-size dynamics
Emma E. Hart, Julian Fennessy, Srivats Chari, and Simone Ciuti
Journal of Mammalogy 101(1): 248- 258
2019
Long-term monitoring of the effects of weather and marking techniques on body condition in the Kuhl’s Pipistrelle Bat, Pipistrellus kuhlii
Locatelli AG, Ciuti S, Presetnik P, Toffoli R, and Teeling EC
Acta Chiropterologica 21(1): 87- 102
Spatial behavior in rehabilitated orangutans in Sumatra: where do they go?
Fechter D, Ciuti S, Kelle D, Pratje P, Dormann FC, Storch I
Plos ONE 14(5): e0215284.
Forecasting the response to global warming in a heat-sensitive species
Brivio F, Zurmühl M, Grignolio S, von Hardenberg J, Apollonio M, and Ciuti S
Scientific Reports 9, 3048
2018
Model averaging in ecology: a review of Bayesian, information-theoretic and tactical approaches.
Dormann CF, Calabrese JM, Guillera-Arroita G, Matechou E, Bahn V, Bartoń KA, Beale CM, Ciuti S, Elith J, Gerstner K, Guelat J, Keil P, Lahoz-Monfort JJ, Pollock LJ, Reineking B, Roberts DR, Schröder B, Thuiller W, Warton DI, Wintle BA, Wood SN, Wuest RO, Hartig F
Ecological Monographs 88(4): 485 - 504
Accelerated seed dispersal along linear disturbances in the Canadian oil sands region
Roberts DR, Ciuti S, Barber QE, Willier C, Nielsen SE
Scientific Reports 8, 4828
An efficient method to exploit LiDAR data in animal ecology
S Ciuti, H Tripke, P Antkowiak, R Silveyra Gonzalez, CF Dormann, M Heurich
Methods in Ecology and Evolution 9 (4): 893-904
2017
Range loss of a threatened grouse species is related to the relative abundance of a mesopredator
JL Kämmerle, J Coppes, S Ciuti, R Suchant, I Storch
Ecosphere 8 (9), e01934. 10.1002/ecs2.1934
Improving river dolphin monitoring using aerial surveys
JS Fürstenau Oliveira, G Georgiadis, S Campello, RA Brandão, S Ciuti
Ecosphere 8 (8), e01912.10.1002/ecs2.1912
Hunting exacerbates the response to human disturbance in large herbivores while migrating through a road network
DG Paton, S Ciuti, M Quinn, MS Boyce
Ecosphere 8 (6), e01841. 10.1002/ecs2.1841
Learning from the mistakes of others: how female elk (Cervus elaphus) adjust behaviour with age to avoid hunters
H Thurfjell, S Ciuti, MS Boyce
PLoS ONE 12 (6)
Cross‐validation strategies for data with temporal, spatial, hierarchical, or phylogenetic structure
DR Roberts, V Bahn, S Ciuti, MS Boyce, J Elith, G Guillera‐Arroita, SHauenstein, JJ Lahoz‐Monfort, B Schröder, W Thuiller, DI Warton, BA Wintle, F Hartig, CF Dormann
Ecography 40 (8): 913-929
Earlier publications by the PI (prior to establishing the new lab in Dublin, Ireland)
2016
Dispersal Ecology Informs Design of Large-Scale Wildlife Corridors
RA Benz, MS Boyce, H Thurfjell, DG Paton, M Musiani, CF Dormann, S Ciuti
PLoS ONE 11 (9)
Reproductive timing in a lekking mammal: male fallow deer getting ready for female estrus
S Ciuti, M Apollonio
Behavioral Ecology 27 (5), 1522-1532
2015
Predicting mule deer recruitment from climate oscillations for harvest management on the northern Great Plains
S Ciuti, WF Jensen, SE Nielsen, MS Boyce
The Journal of Wildlife Management 79 (8), 1226-1238
2014
Applications of step-selection functions in ecology and conservation
H Thurfjell, S Ciuti, SM Boyce
Movement Ecology 2 (4)
Habitat selection during ungulate dispersal and exploratory movement at broad and fine scale with implications for conservation management
J Killeen, H Thurfjell, S Ciuti, D Paton, M Musiani, M Boyce
Movement Ecology 2 (15)
GPS based daily activity patterns in European red deer and North American elk (Cervus elaphus): indication for a weak circadian clock in ungulates
E Ensing, S Ciuti, F de Wijs, D Lentferink, A ten Hoedt, M Boyce, R Hut
PLoS ONE 9 (9)
Female preference and predation risk models can explain the maintenance of a fallow deer (Dama dama) lek and its 'handy' location.
M Apollonio, F De Cena, P Bongi, S Ciuti
PLoS ONE 9 (3), 1-11
2013
Effects of livestock and non-native mouflon on use of high-elevation pastures by Alpine chamois
R Chirichella, S Ciuti, M Apollonio
Mammalian Biology, 344-350
The role of geological substrate for horn growth in ungulates: a case study on Alpine chamois
R Chirichella, S Ciuti, S Grignolio, M Rocca, M Apollonio
Evolutionary Ecology 27 (1), 145-163
2012
Human selection of elk behavioural traits in a landscape of fear
S Ciuti, TB Muhly, DG Paton, AD McDevitt, M Musiani, MS Boyce
Proceedings of the Royal Society of London B: Biological Sciences, rspb20121483
Effects of Humans on Behaviour of Wildlife Exceed those of Natural Predators in a Landscape of Fear
S Ciuti, JM Northrup, TB Muhly, S Simi, M Musiani, JA Pitt, MS Boyce
PLoS ONE 7 (11)
2011
Do antlers honestly advertise the phenotypic quality of fallow buck (Dama dama) in a lekking population?
S Ciuti, M Apollonio
Ethology 117 (2), 133-144
Effects of hunting with hounds on a non-target species living on the edge of a protected area
S Grignolio, E Merli, P Bongi, S Ciuti, M Apollonio
Biological Conservation 144 (1), 641-649
Evaluation of an expandable, breakaway radiocollar for subadult cervids
F De Cena, S Ciuti, M Apollonio
Benefits of a risky life for fallow deer bucks (Dama dama) aspiring to patrol a lek territory
S Ciuti, F De Cena, P Bongi, M Apollonio
Behaviour, 435-460
2010
Ungulates and their management in Italy
M Apollonio, S Ciuti, L Pedrotti, P Banti
European Ungulates and their Management in the 21st century, 475-506
2009
Space use, habitat selection and activity patterns of female Sardinian mouflon (Ovis orientalis musimon) during the lambing season
S Ciuti, A Pipia, S Grignolio, F Ghiandai, M Apollonio
European Journal of Wildlife Research 55 (6), 589-595
Predation has a greater impact in less productive environments: variation in roe deer, Capreolus capreolus, population density across Europe
C Melis, B Jędrzejewska, M Apollonio, KA Bartoń, W Jędrzejewski, JDC Linnell, I Kojola, J Kusak, M Adamic, S Ciuti, I Delehan, I Dykyy, K Krapinec, L Mattioli, A Sagaydak, N Samchuk, K Schmidt, M Shkvyrya, VE Sidorovich, B Zawadzka, S Zhyla
Global ecology and biogeography 18 (6), 724-734
Effect of predation risk on grouping pattern and whistling behaviour in a wild mouflon Ovis aries population
A Pipia, S Ciuti, S Grignolio, S Luchetti, R Madau, M Apollonio
Acta theriologica 54 (1), 77-86
2008
Influence of sex, season, temperature and reproductive status on daily activity patterns in Sardinian mouflon (Ovis orientalis musimon)
A Pipia, S Ciuti, S Grignolio, S Luchetti, R Madau, M Apollonio
Behaviour 145 (12), 1723-1745
Anti‐predator behaviour, space use and habitat selection in female roe deer during the fawning season in a wolf area
P Bongi, S Ciuti, S Grignolio, M Del Frate, S Simi, D Gandelli, M Apollonio
Journal of Zoology 276 (3), 242-251
Ecological sexual segregation in fallow deer (Dama dama): a multispatial and multitemporal approach
S Ciuti, M Apollonio
Behavioral Ecology and Sociobiology 62 (11), 1747-1759
The key role of lamb presence in affecting flight response in Sardinian mouflon (Ovis orientalis musimon)
S Ciuti, A Pipia, F Ghiandai, S Grignolio, M Apollonio
Behavioural Processes 77 (3), 408-412
2006
Red deer (Cervus elaphus) spatial use in the Italian Alps: home range patterns, seasonal migrations, and effects of snow and winter feeding
S Luccarini, L Mauri, S Ciuti, P Lamberti, M Apollonio
Ethology Ecology & Evolution 18 (2), 127-145
Influence of fawning on the spatial behaviour and habitat selection of female fallow deer (Dama dama) during late pregnancy and early lactation
S Ciuti, P Bongi, S Vassale, M Apollonio
Journal of Zoology 268 (1), 97-107
2005
Long-term influence of human presence on spatial sexual segregation in fallow deer (Dama dama)
M Apollonio, S Ciuti, S Luccarini
Journal of Mammalogy 86 (5), 937-946
2004
Could the predation risk hypothesis explain large-scale spatial sexual segregation in fallow deer (Dama dama)?
S Ciuti, S Davini, S Luccarini, M Apollonio
Behavioral Ecology and Sociobiology 56 (6), 552-564
Home range patterns of male fallow deerDama dama in a sub-Mediterranean habitat
S Davini, S Ciuti, S Luccarini, M Apollonio
Acta Theriologica 49 (3), 393-404
2003
Variation in home range size of female Fallow Deer inhabiting a sub-mediterranean habitat
S Ciuti, S Davini, S Luccarini, M Apollonio
REVUE D'ECOLOGIE 58, 381-395