1. M. Kritikos*, C. Huang*, S. Clouston, A. Pellecchia, S. Santiago-Michels,M.A. Carr, T. Hagan#, R. Kotov, S. Gandy, M. Sano, M. Horton, E. Bromet, R. Lucchini, B. Luft. DTI connectometry analysis reveals white matter changes in cognitively impaired World Trade Center responders at midlife. Journal of Alzheimer’s Disease. In press.
   *Co-first authors

2. M. Kritikos, A. Franceschi, P. Vaska, S. Clouston, C. Huang, M. Salerno, Y. Deri, C. Tang, A. Pellecchia, S. Santiago-Michels, M. Sano, E. Bromet, R. Lucchini, S. Gandy, B. Luft. Assessment of Alzheimer’s disease imaging biomarkers in World Trade Center responders with cognitive impairment at midlife. World Journal of Nuclear Medicine, 2021. In press.

3. S. Clouston, M. Kritikos, C. Huang, P.F. Kuan, P. Vaska, A.C. Pellecchina, S. Santiago- Michels, M.A. Carr, S. Gandy, M. Sano, E.J. Bromet, R.G. Lucchini, B.J. Luft. Reduced. cerebellar cortical thickness in World Trade Center responders with cognitive impairment. Translational Psychiatry. 12:107 (2022)

4. S. Mofakham, Y. Liu, A. Hensley, J. Saadon, T. Gammel, M. Cosgrove, J. Adachi, S. Mohammad, C. Huang, P. Djuric, C. Mikell. Injury to thalamocortical projections following traumatic brain injury results in attractor dynamics for cortical networks. Progress in Neurobiology.

5. R. Cattell#, J. Ying, L. Lei, J. Ding#, S. Chen#, M. Serrano Sosa#, C. Huang. Preoperative Prediction of Lymph Node Metastasis Using Deep Learning-based Features. Visual Computing for Industry, Biomedicine, and Art. 2022.

6. M. Cosgrove, J. Saadon, C. Mikell, P. Stefancin, L. Alkadaa, Z Wang, S Saluja, J. Servider, B. Razzaq, C. Huang, S. Mofakham. Thalamo-Prefrontal Connectivity Correlates with Early Command-Following After Severe Traumatic Brain Injury. Frontiers in Neurology.

7. M. Kritikos, S. Clouston, C. Huang, A. Pellecchia, S. Santiago-Michels, M. Carr, R. Kotov, R. Lucchini, S. Gandy, E. Bromet, B. Luft. Cortical Complexity in World Trade Center Responders with Chronic Posttraumatic Stress Disorder. Translational Psychiatry, 2021.

8. Y. Zhao#, T. Zhao#, S. Chen#, X. Zhang, M. Serrano Sosa#, J. Liu, X. Mo, X. Chen, M. Huang, S. Li, X. Zhang, C. Huang. Fully automated radiomic screening pipeline for osteoporosis and abnormal bone density with a deep learning-based segmentation using a short lumbar mDixon sequence. Quantitative Imaging in Medicine and Surgery. 2021.

9. Y. Gao, C. Chang, X. Yu, P. Pang, N. Xiong, C. Huang. A VR-based Volumetric Medical Image Segmentation and Visualization System with Natural Human Interaction. Virtual Reality. 2021. In press.

10. E. Tapia, D.V. Guillen, P. Chalasani, S. Centuori, D. Roe, J.Guillen-Rodriguez, C. Huang, J-P. Galons, C. Thomson, M. Altbach, J. Trujillo, L. Pinto, J. Martinez, A. Algotar, H-H. Chow. A randomized controlled trial of metformin in women with components of metabolic syndrome: Feasibility and effects on adiposity and breast density. Breast Cancer Research and Treatment. 2021.

11. Y. Deri, S. Clouston, C. DeLorenzo, J. Gardus, E. Bartlett, S. Santiago-Michels, L. Bangiyev, W. Kreisl, R. Kotov, C. Huang, M. Slifstein, R. Parsey, B. Luft. Neuroinflammation and Mild Cognitive Impairment in World Trade Center responders at midlife: A study using [18F]- FEPPA PET imaging. Brian Behavior and Immunity - Health. 2021

12. D. Kim, A. Job, S. Gokarakonda, C. Huang, L. Chekuri, J.a Carbajal, R. Caceda. Synergistic effect of chronic pain and non-suicidal self-harm on pain sensitivity. European Archives of Psychiatry and Clinical Neuroscience, 2021

13. P.A. Thompson, C. Huang, J. Yang, B.C. Wertheim, D. Roe, X. Zhang, J. Ding#, P. Chalasani, C. Preece, J.A. Martinez, H.S. Chow, A.T. Stopeck. Sulindac, a non-selective NSAID, reduces breast density in postmenopausal women with breast cancer treated with aromatase inhibitors. Clinical Cancer Research, 2021

14. M. Serrano Sosa#, J. Van Snellenberg, J. Meng, J. Luceno, K. Spuhler, J Weinstein, A. Abi-Dargham, M. Slifstein, C. Huang. Multi-Task Learning based 3-Dimensional Striatal Segmentation of MRI - fMRI and PET Objective Assessments. Journal of Magnetic Resonance Imaging

15. J. Huang, X. Li, J. Wang, X. Yu, L. Zhu, Y. Zhan, Y. Gao, C. Huang. Cross-dataset multiple organ segmentation from CT imagery using FBP-derived domain adaptation. IEEE Access.

16. C. Huang, M. Kritikos, S. Clouston, Y. Deri, M. Serrano-Sosa#, L. Gangiyev, S. Santiago-Michels, S. Gandy, M. Sano, E. Bromet, B. Luft. White Matter Connectivity in Incident Mild Cognitive Impairment: A Diffusion Spectrum Imaging Study of World Trade Center Responders at Midlife. Journal of Affective Disorder.

17. J. Ding#, S. Chen#, M. Serrano-Sosa#, R. Cattell#, L. Lei, J. Sun, P. Prasanna, C. Liu, C. Huang. Optimizing the peritumoral region size in radiomic analysis for sentinel lymph node status prediction in breast cancer. Academic Radiology

18. W. Li, Y. Fang, J. Liao, W. Yu, L. Yao, H. Cui, X. Zeng, S. Li, C. Huang. Clinical and CT Features of the COVID-19 Infection: Comparison Among Four Different Age Groups. European Geriatric Medicine.

19. K. Spuhler#, M. Serrano-Sosa#, R. Cattell#, C. DeLorenzo, C. Huang, Full-count PET Recovery from Low-count Image Using a Dilated Convolutional Neural Network. Medical Physics.

20. W. Liu, Y. Cheng, Z. Liu, C. Liu, R. Cattell#, X. Xie, Y. Wang, X. Yang, W. Ye, C. Liang, J. Li, Y. Gao, C. Huang, C. Liang. Preoperative prediction of Ki-67 status in breast cancer with multi-parametric MRI using transfer learning. Academic Radiology.

21. M. Ananth, E. Bartlett, C. DeLorenzo, X. Lin, L. Kunkel, N. Vadhan, G. Perlman, M. Godstrey, D. Holzmacher, R.T. Ogden, R. Parsey, C. Huang. Prediction of Lithium Treatment Response in Bipolar Depression using 5-HTT and 5-HT1A PET. EJNMMI.

22. M. Serrano-Sosa#, K. Sampathgiri, C. DeLorenzo, R.V. Parsey, C. Huang. The Importance of Identifying Functional Val158Met Polymorphism in Catechol-O- Methyltransferase (COMT) when Assessing MRI-based Volumetric Measurements in Major Depressive Disorder. Brain Imaging and Behavior.

23. Y. Qiu, C. Tang, M Serrano-Sosa#, J. Hu, J. Zhu, G. Tang, C. Huang, M. Huang. Bone microarchitectural parameters can detect oxytocin induced changes prior to bone density on mitigating bone deterioration in rabbit osteoporosis model using micro-CT. BMC Musculoskeletal Disorders.

24. R. Cattell#, S. Chen#, C. Huang. Robustness of Radiomic Features in Magnetic Resonance Imaging: Review and A Phantom Study. Visual Computing for Industry, Biomedicine, and Art.

25. Y. Zhao, M. Huang, M Serrano-Sosa#, R. Cattell#, W. Fan, M. Li, J. Chen, M. Gao, Q. Zhou, X. Zhang, C. Huang. Fatty infiltration of paraspinal muscles is associated with bone mineral density of lumbar spine in women. Archives of Osteoporosis.

26. R.L. Pillai, C. Huang, A. LaBella, M. Zhang, J. Yang, M. Trivedi, M. Weissman, P. McGrath, M. Fava, B. Kurian, C. Cooper, M. McInnis, M.A. Oquendo, D.A. Pizzagalli, R. Parsey, C. DeLorenzo. Examining Raphe-Amygdala Connectivity as a Biological Predictor of SSRI Response.Journal of Affective Disorders, 2019; 256 pp8;

27. D. Wooten, L. Ortiz-Teran, N. Zubcevik, X. Zhang, C. Huang, J. Sepulcre, N. Atassi, K. Johnson, R. Zafonte, G. El Fakhri. Multimodal Signatures of Tau Pathology, Neuronal FiberIntegrity, and Functional Connectivity in Traumatic Brain Injury. Journal of Neurotrauma. 2019 (36)

28. K. Spuhler#, J. Ding#, C. Liu, J. Sun, M. Serrano-Sosa#, M.A. Moriarty, C. Huang. Task-based assessment of a convolutional neural network for segmenting breast lesions for radiomic analysis. Magnetic Resonance in Medicine. 2019;82:786-795

29. K.Wengler, J.Wang, M. Serrano-Sosa#, S. Hussain, A. He, S. Gumus, C. Huang, K.T. Bae, Xiang He. Mapping Hepatic Blood Oxygenation by quantitative BOLD (qBOLD). Magnetic Resonance in Medicine. 2019;81:3272-3282.

30. T. Fukuda, M. Huang, A. Janardhanan, M.E. Schweitzer, C. Huang. Correlation of bone marrow cellularity and metabolic activity in healthy volunteers with simultaneous PET/MR imaging. Skeletal Radiology. 2019;48(4)

31. K. Spuhler, J. gardus III, Y. Gao, C. DeLorenzo, R. Parsey, C. Huang. Synthesis of patient-specific transmission data for PET/MRI attenuation correction in the brain using a convolutional neural network. Journal of Nuclear Medicine. 2019;60(4)

32. M. Gao, M. Lin, R. Moffitt, M. Salazar, J. Park, J. Vacirca, C. Huang, K. Shroyer, M. Choi, G.V. Georgakis, A.R. Sasson, M. Talamini, J. Kim. Direct Therapeutic Targeting of Immune Checkpoint PD-1 in Pancreatic Cancer. British Journal of Cancer. 120, 88-96 (2019)

33. Y. Zhao, M. Huang, J. Ding#, X. Zhang, K. Spuhlery, S. Hu, M. Li, W. Fan, L Chen, X. Zhang, S. Li, Q Zhou, C. Huang. Prediction of abnormal bone density and osteoporosis from lumbar spine MR using modi.ed Dixon Quant in 257 subjects with QCT as reference. Journal of Magnetic Resonance Imaging

34. C. Liu, J. Ding#, K. Spuhler#, Y. Gao, M. Serrano Sosay, M.A. Moriartyz, S. Hussain, X. He, C. Liang, C. Huang. Preoperative prediction of sentinel lymph node metastasis in breast cancer by radiomic signatures from dynamic contrast-enhanced MRI. Journal of Magnetic Resonance Imaging

Top downloaded paper recognition 2018-2019, Journal of Magnetic Resonance Imaging

Top cited article recognition 2019-2020, Journal of Magnetic Resonance Imaging

The #1 cited original research paper published in 2019, Journal of Magnetic Resonance Imaging

35. J. Ding#, A. Stopeck, Y. Gao, M.T. Marron, B.C. Wertheim, M.I. Altbach, J.P. Galons, D. Roe, F. Wang, G. Maskarinec, C. Thomson, P.A. Thompson, C. Huang. Reproducible automated breast density measure with no ionizing radiation using fat-water decomposition MRI. Journal of Magnetic Resonance Imaging

36. E. Bartlett, C. DeLorenzo, R. Parsey, C. Huang. Radio-Frequency Noise Contamination from PET Blood Sampling Pump: Effects on Structural MRI Image Quality in Simultaneous PET/MR Studies. Medical Physics 2018; 45(2)

37. C. Liu, K. Wang, X. Li, J. Zhang, J. Ding#, K. Spuhler#, T. Duong, C. Liang, C. Huang. Breast Lesion Characterization using Whole-lesion Histogram Analysis with Stretched-exponential Diffusion Model. Journal of Magnetic Resonance Imaging

38. C. Cheng; C. Huang, N. Zhou#, L. Ver Hoef, Y. Gao. The Bumps Under the Hippocampus. Human Brain Mapping 2018; 39(1)

39. K. Spuhler#, E. Bartlett, J. Ding#, C. DeLorenzo, R. Parsey, C. Huang. Temporal Pole Diffusivity Changes in Bipolar Depression. Synapse 2018; 72(2)

40. C.A. Thomson, H.H.S. Chow, B.C. Wertheim, D.J. Roe, A. Stopeck, G. Maskarinec, M.I. Altbach, P. Chalasani, C. Huang, M.B. Strom, J. Galons, P.A. Thompson. A randomized, placebo-controlled trial of diindolylmethane for breast cancer biomarker modulation in patients taking tamoxifen. Breast Cancer Res Treat (2017). doi:10.1007/s10549-017-4292-7

41. C. Huang, J. Ouyang, T.G. Reese, Y. Wu, G. El Fakhri, J. Ackerman. Continuous MR bone density measurement using water- and fat-suppressed projection imaging (WASPI) for PET attenuation correction in PET-MR. Physics in Medicine and Biology. 2015; 60 369-381

42. J. Dutta*, C. Huang*, Q. Li and G. El Fakhri. Pulmonary Imaging Using Respiratory Motion Compensated Simultaneous PET/MR. Medical Physics, 2015; 42 (7), 4227-4340
    *Co-first authors
    This article was selected as the cover and featured article of Medical Physics (Volume 42, Issue 7, 2015 July)

43. X. Zhang, Y. Chen, R. Lim, C. Huang, I. Chebib, G. El Fakhri. Synergistic role of simultaneous PET/MRI-MRS in soft tissue sarcoma metabolism imaging. Magnetic Resonance Imaging, 2016; 34(3) doi:10.1016/j.mri.2015.10.027

44. C. Huang†*, Y. Petibon*, J. Ouyang, T.G. Reese, M. Ahlman, D. Bluemke and G. El Fakhri. Accelerated acquisition of tagged MRI for cardiac motion correction in simultaneous PET-MR: a phantom and patient study. Medical Physics. 2015; 42 (2), 1087-1097 [pubmed link]
    *Co-first authors
    †Corresponding authors

45. C. Huang, J. Galons, C.G. Graff, E.W. Clarkson, A. Bilgin, B. Kalb, D.R. Martin, and M.I. Altbach, Correcting Partial Volume Effect in Bi-exponential T2 Estimation of Small Lesions. Magnetic Resonance in Medicine. 2014; [Early view].

46. T. Hagio, C. Huang, A. Abidov, J. Singh, B. Ainapurapu, D. KC, S. Squire, D. Bruck and M.I. Altbach. T2 mapping of the heart with a double-inversion radial fast spin-echo (DIR-RADFSE) method with indirect echo compensation. Journal of Cardiovascular Magnetic Resonance. Journal of Cardiovascular Magnetic Resonance 2015, 17:24 doi:10.1186/s12968-015-0108-2 [JCMR link]

47. J. Ouyang, Y. Petibon, C. Huang, T.G. Reese, A. Syrkina, G. El Fakhri. Quantitative simultaneous PET-MR imaging. Journal of Medical Imaging 1 (3), 033502-033502 [pubmed link]

48. C. Huang†, M.I. Altbach, G. El Fakhri, Pattern recognition for rapid T2 mapping with Stimulate Echo Compensation. Magnetic Resonance Imaging, 2014 Sep; 32(7):969-74 [pubmed link]
    † Corresponding authors

49. Y. Petibon*, C. Huang*, J. Ouyang, T.G. Reese, Q. Li, S. Syrkina, Y.L. Chen and G. El Fakhri. Relative role of MR-based motion correction and PSF modeling in whole-body simultaneous PET-MR imaging. Medical Physics, 2014; 41(4) [pubmed link]
    *Co-first authors

50. C. Huang, J.L. Ackerman, Y. Petibon, G. El Fakhri, T.J. Brady and J. Ouyang, MR-based motion correction for PET imaging using MR micro-coils in simultaneous PET-MR:Phantom Study. Medical Physics, 2014; 41(4) [pubmed link]

51. C. Huang, J.L. Ackerman, Y. Petibon, M. Normandin, T.J. Brady, G. El Fakhri and J. Ouyang, Motion compensation for brain PET imaging using wireless MR active markers in simultaneous PET-MR: phantom and non-human primate studies. NeuroImage, 2014; 91:129- 137 [pubmed link]

52. Y. Petibon, J. Ouyang, X. Zhu, C. Huang, T.G. Reese, S.Y. Chun, and G. El Fakhri. Cardiac motion compensation and resolution modeling in simultaneous PET-MR: a cardiac lesion detection study. Physics in Medicine and Biology 2012; 58 (7), 2085 [pubmed link]

53. C. Huang, A. Bilgin, T. Barr and M.I. Altbach. T2 Relaxometry with Indirect Echo Compen- sation from Highly Undersampled Data. Magnetic Resonance inMedicine, 2013; 70: 1026-1037. [pubmed link]

54. C. Huang, C.G. Graff, E.W. Clarkson, A. Bilgin, and M.I. Altbach. T2 Mapping from Highly Undersampled Data by REconstruction of Principal COmponent coe.cient Maps (REPCOM) using Compressed Sensing. Magnetic Resonance in Medicine, 2012; 67: 1355-1366 [pubmed link]

1. M.I. Altbach, C. Huang, A. Bilgin. Extending the capabilities of quantitative MRI. SPIE Newsroom. DOI: 10.1117/2.1201309.005136

1. SYSTEM AND METHOD FOR IMAGE PROCESSING WITH HIGHLY UNDERSAMPLED IMAGING DATA

M Altbach, A Bilgin, C Huang, CG Graff - US Patent 2015/0006114

2. SYSTEM AND METHOD FOR CORRECTING PET IMAGING DATA FOR MOTION US- ING MR IMAGING DATA AND TRACKING COILS

J Ouyang, J Ackerman, C Huang, Y Petibon, G El Fakhri - US Patent 2014/036132

3. SYSTEMS AND METHODS FOR MOTION CORRECTION IN POSITRON EMISSION TOMOGRAPHY IMAGING

G El Fakhri, C Huang, J Ouyang, Q Li, Y Petibon - US Patent 2014/0334702

4. SYSTEM AND METHOD FOR IMAGE PROCESSING WITH HIGHLY UNDERSAMPLED IMAGING DATA

M Altbach, A Bilgin, C Huang, C Graff - PCT US2013/024500