This work is based on the following papers (also stored in the papers folder):
Hu et al. 2012: a very good reference where the physics and the numerical methods are accurately described
Rimmer et al. 2015: another interesting paper with details on numerics and chemistry
Burcat et al. 2005: all you need for thermochemical data and reverse rates
Kondepudi & Prigogine Book: entropy production is described on their chapter 9
and using the following databases:
KIDA database: one of the most complete databases for chemical kinetics
SWRI database: from where we get photochemical cross-sections
Burcat's thermochemistry: thermochemsitry data for many species (note there are some copyright restrictions!)