Teaching

MATLAB Codes for Mathematical Modeling

Hodgkin Huxley Code

Hodgkin Huxley Code - Simulate an action potential in a nerve

Hodgkin Huxley Code (PDE) - Watch the action potential propagate in space

Discrete Time Models

Logistic Map - Code to study the logistic map

Breathing Code - Matlab code for breathing in discrete time

Host Parasite Code - Matlab code for host parasite interactions in discrete time

Stochastic Models

Random Walks

Markov Chain

Monte Carlo

Codes using Gillespie's algorithm

Gillespie Chemical Reaction

Gillespie Lotka-Volterra