Publications

2021

Gill HS, Halder J, Zhang J, Brar N, Rai TS, Hall C, Bernardo A, St Amand P, Bai G, Olson E, Ali S, Turnipseed B, Sehgal SK* (2021)Multi-trait multi-environment genomic prediction of agronomic traits in advanced breeding lines of winter wheat. In Press

AlTameemi, R., Gill, H.S., Ali, S.... Sehgal (2021) Genome-wide association analysis permits characterization of Stagonospora nodorum blotch (SNB) resistance in hard winter wheat. Sci Rep 11, 12570 (2021). https://doi.org/10.1038/s41598-021-91515-6

Li H, X Tian, S Pei, W Men, C Ma, SK Sehgal, Y Zhao, Q Chen, B Wang, et al (2021) Development of Novel Wheat-Aegilops longissima 3Sl Translocations Conferring Powdery Mildew Resistance and Specific Molecular Markers for Chromosome 3Sl Plant Disease

Liu S, Wang D, Lin M, Sehgal SK, Dong L, Wu Y, Bai G (2021) Artificial selection in breeding extensively enriched a functional allelic variation in TaPHS1 for pre-harvest sprouting resistance in wheat. Theoretical and Applied Genetics 134 (1), 339-350

2020

Sidhu JS, Singh D, Gill HS, Brar NK, Qiu Y, Halder J, Al Tameemi R, Turnipseed B, Sehgal SK* (2020) Genome-wide association study uncovers novel genomic regions associated with coleoptile length in hard winter wheat. Front. Genet. 10:1345. doi: 10.3389/fgene.2019.01345

Latif S, Wang L, Khan J, Ali Z, Sehgal SK, Babar MA, Wang J, Quraishi UM (2020) Deciphering the Role of Stay-Green Trait to Mitigate Terminal Heat Stress in Bread Wheat. Agronomy 10, 1001

Kaur N, Sehgal SK, Glover D, Byamukama E, Ali S (2020) Impact of Fusarium graminearum on seed germination and seedling blight in hard red spring cultivars in South Dakota. J Plant Pathology & Microbiology 11:495 https://doi.org/10.35248/2157-7471.20.11.495

Liu W, Li H, Dong Z, Ma C, Xia Q, Tian X, Sehgal S, Friebe B, Ma P (2020) A spontaneous wheat-Aegilops longissima translocation carrying Pm66 confers resistance to powdery mildew. Theor Appl Genet 133(4):1149-1159. doi: 10.1007/s00122-020-03538-8

Dong Z, X, Ma C, Xia Q, Wang B, Chen Q, Sehgal SK, Friebe B, Li H and Liu W (2020) Towards Physical Mapping of Pm57, a Powdery Mildew Resistance Gene Derived from Aegilops searsii. Int. J. Mol. Sci. 21(1), 322; https://doi.org/10.3390/ijms21010322

2019

Halder J, Zhang J, Ali S, Sidhu JS, Gill HS, Talukdar S, Kleinjan J, Turnipseed B, Sehgal SK* (2019) Mining and genomic characterization of resistance to tan spot, Stagonospora nodorum blotch (SNB), and Fusarium head blight in Watkins core collection of wheat landraces. BMC Plant Biology 19: 480 https://doi.org/10.1186/s12870-019-2093-3

Ramakrishnan SM, Sidhu JS, Ali S, Kaur N, Wu J, Sehgal SK* (2019) Molecular characterization of bacterial leaf streak resistance in hard winter wheat. PeerJ 7:e7276 https://doi.org/10.7717/peerj.7276

Gill HS, Li C, Sidhu JS, Liu W, Wilson D, Bai G, Gill GS, Sehgal SK* (2019) Fine Mapping of the Wheat Leaf Rust Resistance Gene Lr42. Int. J. Mol. Sci. 20(10), 2445; https://doi.org/10.3390/ijms20102445

Djanaguiraman M, Prasad PV V, Kumari J, Sehgal SK, Friebe B, Djalovic I, Chen Y, Siddique KHM, Gill BS (2019) Alien chromosome segment from Aegilops speltoides and Dasypyrum villosum increases drought tolerance in wheat via profuse and deep root system. BMC Plant Biology201919:242 https://doi.org/10.1186/s12870-019-1833-8

Sidhu JS, Ramakrishnan SM, Ali S, Bernardo A, Bai G, Abdullah S, Ayana G, Sehgal SK* (2019) Assessing the genetic diversity and characterizing genomic regions conferring Tan Spot resistance in cultivated rye. PLoS ONE 14(3): e0214519. https://doi.org/10.1371/journal.pone.0214519

Singh N, Wu S, Raupp WJ, Sehgal S, Arora S, Tiwari V,.., Poland J (2019) Efficient curation of genebanks using next generation sequencing reveals substantial duplication of germplasm accessions. Scientific Reports. 9(1):650. https://doi.org/10.1038/s41598-018-37269-0

Singh N, Wu S, Tiwari V, Sehgal S, Raupp J, Wilson D,..., Poland J (2019) Genomic Analysis Confirms Population Structure and Identifies Inter-Lineage Hybrids in Aegilops tauschii. Frontiers in Plant Science.10:9

Kumar S, Sieverding H, Lai L, Thandiwe N, Wienhold B, Redfearn D, Archer D, Ussiri D, Faust D, Landblom D, Grings E, Stone JJ, Jacquet J, Pokharel K, Liebig M, Schmer M, Sexton P, Mitchell R, Smalley S, Osborne S, Ali S, Şentürklü S, Sehgal S, Owens V, Jinc V (2019) Facilitating crop-livestock reintegration in the Northern Great Plains. Agronomy J 111:1–16 (Peer-reviewed review article)

2018

Appels, R., Eversole, K., Feuillet, C., Keller, B., Rogers, J., Stein, N., Pozniak, C.J., Choulet, F., Distelfeld, A., Poland, J., Ronen, G., Sharpe, A.G., Pozniak, C., Barad, O., Baruch, K., Keeble-Gagnère, G., Mascher, M., Ben-Zvi, G., Josselin, A.-A., Himmelbach, A., Balfourier, F., Gutierrez-Gonzalez, J., Hayden, M., Koh, C., Muehlbauer, G., Pasam, R.K., Paux, E., Rigault, P., Tibbits, J., Tiwari, V., Spannagl, M., Lang, D., Gundlach, H., Haberer, G., Mayer, K.F.X., Ormanbekova, D., Prade, V., Šimková, H., Wicker, T., Swarbreck, D., Rimbert, H., Felder, M., Guilhot, N., Kaithakottil, G., Keilwagen, J., Leroy, P., Lux, T., Twardziok, S., Venturini, L., Juhász, A., Abrouk, M., Fischer, I., Uauy, C., Borrill, P., Ramirez-Gonzalez, R.H., Arnaud, D., Chalabi, S., Chalhoub, B., Cory, A., Datla, R., Davey, M.W., Jacobs, J., Robinson, S.J., Steuernagel, B., van Ex, F., Wulff, B.B.H., Benhamed, M., Bendahmane, A., Concia, L., Latrasse, D., Alaux, M., Bartoš, J., Bellec, A., Berges, H., Doležel, J., Frenkel, Z., Gill, B., Korol, A., Letellier, T., Olsen, O.-A., Singh, K., Valárik, M., van der Vossen, E., Vautrin, S., Weining, S., Fahima, T., Glikson, V., Raats, D., Číhalíková, J., Toegelová, H., Vrána, J., Sourdille, P., Darrier, B., Barabaschi, D., Cattivelli, L., Hernandez, P., Galvez, S., Budak, H., Jones, J.D.G., Witek, K., Yu, G., Small, I., Melonek, J., Zhou, R., Belova, T., Kanyuka, K., King, R., Nilsen, K., Walkowiak, S., Cuthbert, R., Knox, R., Wiebe, K., Xiang, D., Rohde, A., Golds, T., Čížková, J., Akpinar, B.A., Biyiklioglu, S., Gao, L., N’Daiye, A., Kubaláková, M., Šafář, J., Alfama, F., Adam-Blondon, A.-F., Flores, R., Guerche, C., Loaec, M., Quesneville, H., Condie, J., Ens, J., Maclachlan, R., Tan, Y., Alberti, A., Aury, J.-M., Barbe, V., Couloux, A., Cruaud, C., Labadie, K., Mangenot, S., Wincker, P., Kaur, G., Luo, M., Sehgal, S., Chhuneja, P., Gupta, O.P., Jindal, S., Kaur, P., Malik, P., Sharma, P., Yadav, B., Singh, N.K., Khurana, J., Chaudhary, C., Khurana, P., Kumar, V., Mahato, A., Mathur, S., Sevanthi, A., Sharma, N., Tomar, R.S., Holušová, K., Plíhal, O., Clark, M.D., Heavens, D., Kettleborough, G., Wright, J., Balcárková, B., Hu, Y., Salina, E., Ravin, N., Skryabin, K., Beletsky, A., Kadnikov, V., Mardanov, A., Nesterov, M., Rakitin, A., Sergeeva, E., Handa, H., Kanamori, H., Katagiri, S., Kobayashi, F., Nasuda, S., Tanaka, T., Wu, J., Cattonaro, F., Jiumeng, M., Kugler, K., Pfeifer, M., Sandve, S., Xun, X., Zhan, B., Batley, J., Bayer, P.E., Edwards, D., Hayashi, S., Tulpová, Z., Visendi, P., Cui, L., Du, X., Feng, K., Nie, X., Tong, W. and Wang, L. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome. Science, 361.

Ayana GT, Ali S, Sidhu JS, Gonzalez Hernandez JL, Turnipseed B and Sehgal SK (2018) Genome-Wide Association Studyfor Spot Blotch Resistance in HardWinter Wheat. Front. Plant Sci. 9:926. doi: 10.3389/fpls.2018.00926

Wiersma, AT, Whetten RB, Zhang G, Sehgal SK, Kolb FL, Poland JA, Mason RE,Carter AH, Cowger C, and Olson EL (2018). Registration of Two Wheat Germplasm Lines Fixed for Pm58. J. Plant. Reg. 0. doi:10.3198/jpr2017.06.0036crg

2017

Abdullah S, Sehgal SK*, Yu J, Turnipseed B, Ali S* (2017) Insight into tan spot and stem rust resistance and susceptibility by studying the pre-green revolution global collection of wheat. The Plant Pathology Journal: 33(2): 125–132

Abdullah S, Sehgal SK, Ali S (2017) Race diversity of Pyrenophora tritici-repentis in South Dakota and response of predominant wheat cultivars to tan spot. Plant Pathol. Microbiol. 8 (5):1-7.

Abdullah S, Sehgal SK, Glover KD, Ali S (2017) Reaction of global collection of rye (Secale cereale L.) to tan spot and Pyrenophora tritici-repentis races in South Dakota. The Plant Pathology Journal 33:229-237.

Abdullah S, Sehgal SK, Ali S, Liatukas Z, Ittu M, Kaur N (2017) Characterization of Pyrenophora tritici-repentis (tan spot of wheat) races in Baltic States and Romania. The Plant Pathology Journal 33:133-139

2016

Wiersma AT, Brown LK, Brisco EI, Liu TL, Childs KL, Poland JA, Sehgal SK, Olson EL (2016) Fine mapping of the stem rust resistance gene SrTA10187 Theor Appl Genet

129(12):2369-2378 (Impact factor: 3.6)

Gong W, Gong W, HanR, Li G, Sehgal SK, Li H, Liu H, Song J, Song G, Liu C, Liu J (2016) Chromosome arm-specific markers from Aegilops searsii permits targeted introgression. Biologia 71:87-92

2015

Liu S, Sehgal SK, Lin M, Li J, Trick H, Gill BS, Bai G (2015) Independent mis-splicing mutations in TaPHS1 causing loss of pre-harvest sprouting (PHS) resistance during wheat domestication. New Phytologisthttp://onlinelibrary.wiley.com/enhanced/doi/10.1111/nph.13489 (Impact factor: 7.67) Citations 3

Koo D-H, Sehgal SK, Friebe B, Gill BS (2015) Structure and Stability of Telocentric Chromosomes in Wheat. PLoS ONE 10(9): e0137747 (Impact factor: 3.2 ) Citations 2

Chhuneja, Yadav B, Stirnweis D, Hurni S, Kaur S, Elkot AF, Keller B, Wicker T, Sehgal SK, Gill BS, Singh KS (2015) Fine mapping of a new powdery mildew resistance gene PmTb7A and a new allele of Pm1Tb in Triticum boeoticum and identification of STS markers suited for MAS using the survey sequence data of chromosome 7AL. Theor Appl Genet http://link.springer.com/article/10.1007/s00122-015-2570-5/fulltext.html (Impact factor: 3.6) Citations 4

Cainong JC, Bockus WW, Feng Y, Chen P, Qi L, Sehgal SK, Danilova TV, Koo D, Friebe B, Gill BS (2015) Chromosome engineering, mapping, and transfer of native grass resistance to Fusarium Head Blight disease into wheat. Theor Appl Genet 128: 1019-1027(http://link.springer.com/article/10.1007%2Fs00122-015-2485-1)(Impact factor: 3.6) Citations 10

Chapman JA, Mascher M, Buluç AN, Barry K, Georganas E, Session A, Strnadova V, Jenkins J, Sehgal S, Oliker L, Schmutz J, Yelick KA, Scholz U, Waugh R, Poland JA, Muehlbauer GJ, Stein N, Rokhsar DS (2015) A whole-genome shotgun approach for assembling and anchoring the hexaploid bread wheat genome. Genome Biol. 16(1):26 (http://genomebiology.com/content/pdf/s13059-015-0582-8.pdf)(Impact factor: 10.50) Citations 63

2014

Jugulam M, Niehues K, Godar AS, Koo DH , Danilova TV , Friebe BR , Sehgal S , Varanasi V, Wiersma A, Westra P, Stahlman P, Gill BS (2014) Tandem Amplification of a Chromosomal Segment Harboring EPSPS Locus Confers Glyphosate Resistance in Kochia scoparia. Plant Physiol early online (http://www.plantphysiol.org/content/166/3/1200.full.pdf+html) (Impact factor: 7.98) Citations 15

Tiwari VK, Wang S, Sehgal S, Vrána J, Friebe B, Kubaláková M, Chhuneja P, Doležel J, Akhunov E, Kalia B, Sabir J, Gill BS (2014) SNP discovery and mapping alien introgressions in wheat. BMC Genomics 15: 274 http://www.biomedcentral.com/content/pdf/1471-2164-15-273.pdf (Impact factor: 4.31) Citations 28

Gawroński P, Ariyadasa R, Poursarebani N, Himmelbach A, Kilian B, Stein N, Steuernagel B, Hensel G, Kumlehn J, Sehgal SK, Gill BS, Gould P, Hall A, Schnurbusch T (2014) A Distorted Circadian Clock Causes Early Flowering and Temperature-Dependent Variation in Spike Development in the Eps-3A^m Mutant of Einkorn Wheat . Geneticshttp://www.genetics.org/content/early/2014/01/15/genetics.113.158444.full.pdf+html (Impact factor: 4.87) Citations 17

2013

Liu S, Sehgal SK, Li J, Lin M, Trick H, Yu, J, Gill BS, Bai G (2013) Cloning and Characterization of a Critical Regulator for Pre-Harvest Sprouting in Wheat. Genetics 195:263-273 http://www.genetics.org/content/195/1/263.full.pdf+html (Impact factor: 4.87)Citations 46

Luo MC, Gu YQ, You FM, Deal KR, Ma Y, Hu Y, Huo N, Wang Y, Wang J, Chen S, Jorgensen CM, Zhang Y, McGuire PE, Pasternak S, Stein JC, Ware D, Kramer M, McCombie WR, Kianian SF, Martis MM, Mayer KF, Sehgal SK, Li W, Gill BS, Bevan MW, Simková H, Dolezel J, Weining S, Lazo GR, Anderson OD, Dvorak (2013) A 4-gigabase physical map unlocks the structure and evolution of the complex genome of Aegilops tauschii, the wheat D-genome progenitor. Proc. Natl. Acad. Sci. 119: 7940-45 doi: 10.1073/pnas.1219082110 (Impact factor: 9.8) Citations 107

Akhunov E*, Sehgal S*, Liang H, Wang S, Akhunova A, Kaur G, Li W, Forrest KL, See D, Simkova H Hayden M, Luo M-C,Farris J, Dolezel J, Gill BS (2013) Comparative analysis of orthologous genes in grass genomes reveals the accelerated rates of alternative splicing and coding sequence evolution in polyploid wheat. Plant Physiol.161: 252–265 doi:10.1104/pp.112.205161 (Impact factor: 7.98)(*equal contribution) Citations 55

2012

Brenchley R, Spannagl M, Pfeifer M, Barker GLA, D’Amore R, Allen AM, McKenzie N, Kramer K, Kerhornou A, Bolser D, Kay S, Waite D, Trick M, Bancroft I, Gu Y, Huo N, Luo M-C, Sehgal S, Gill B, Kianian K, Anderson O, Kersey P, Dvorak J, McCombie WR, Hall A, Mayer KFX, Edwards KJ, Bevan MW, Hall N (2012) Analysis of the bread wheat genome using whole-genome shotgun sequencing. Nature491:705-710 doi:10.1038/nature11650 (Impact factor: 42.35) Citations 577

Sehgal SK , Li W, Rabinowicz PD, Chan A, Šimková H, Doležel J, Gill BS (2012) Chromosome arm-specific BAC end sequences permit comparative analysis of homoeologous chromosomes and genomes of polyploid wheat. BMC Plant Biology12:64 (online DOI:10.1186/1471-2229-12-64) (Impact factor: 4.35) Citations 21

Rawat N, Sehgal SK, Joshi A, Rothe N, Wilson DL, McGraw N, Vadlani PV, Li W, Gill BS (2012) A diploid wheat TILLING resource for wheat functional genomics. BMC Plant Biology12:205 (online doi:10.1186/1471-2229-12-205) (Impact factor: 4.35) Citations 40

Kumar S, Sehgal SK, Kumar U, Prasad PVV, Joshi AK, and Gill BS (2012) Genomic characterization of drought tolerance related traits in spring wheat. Euphytica 186:265-276 (online DOI: 10.1007/s10681-012-0675-3) (Impact factor: 1.55) Citations 29

2011

Sehgal SK, Gupta S, Kaur S, Sharma A, Bains NS (2011) A direct hybridization approach for gene transfer from Aegilops tauschii Coss. to Triticum aestivum L. Plant Breeding 130:98-100(online http://onlinelibrary.wiley.com/doi/10.1111/j.1439-0523.2010.01817.x/full)

(Impact factor: 1.59) Citations 9

Liu W*, Thummasuwan S*, Sehgal SK, Chouvarine P, Peterson DG (2011) Characterization of the genome of bald cypress. BMC Genomics12:553 (online http://www.biomedcentral.com/content/pdf/1471-2164-12-553.pdf) (Impact factor: 4.40) Citations 19

2010

Gupta S, Kaur S, Sehgal S, Sharma A, Chhuneja P, Bains NS (2010) Genotypic variation for cellular thermotolerance in Aegilops tauschii Coss., the D genome progenitor of wheat. Euphytica175: 373-381 (online DOI: 10.1007/s10681-010-0185-0) (Impact factor: 1.55)Citations 12

Liu C*, Li G-R*, Sehgal SK, Jia J-Q, Yang Z-J, Friebe B, Gill B (2010) Genomic divergence in the genus Dasypyrum: evidence from molecular phylogenetic analysis and in situ hybridization. Plant Systematics and Evolution 288:149–156 (online DOI: 10.1007/s00606-010-0319-9) (Impact factor: 1.30) Citations 14

Sharma S, Sreenivasulu N, Harshavardhan VT, Seiler C, Sharma S, Khalil ZN, Akhunov E, Sehgal SK and Röder MS (2010) Delineating the structural, functional and evolutionary relationships of sucrose phosphate synthase gene family II in wheat and related grasses. BMC Plant Biology 10:134 (online www.biomedcentral.com/1471-2229/10/134) (Impact factor: 4.35) Citations 6

2008 and earlier

Sehgal SK , Kaur G, Sharma I, Bains NS (2008) Development and molecular marker analysis of Karnal bunt resistant near isogenic lines in bread wheat variety PBW 343. Indian J Genet Plant Breed 68(1): 21-25 (online http://www.indianjournals.com/ijor.aspx?target=ijor:ijgpb&volume=68&issue=1&article=004) (Impact factor: 0.18) Citations 4

Singh S, Sharma I, Sehgal SK, Bains NS, Guo Z, Nelson J, Bowden R (2007) Molecular mapping of QTLs for Karnal bunt resistance in two recombinant inbred populations of bread wheat. Theor Appl Genet 116: 147-154 (online DOI: 10.1007/s00122-007-0654-6) (Impact factor: 3.30) Citations 12

Sharma I, Bains NS, Sirari A, Sangha KS, Sehgal SK, Bodhraj (2007) Genetics of leaf and stripe rust resistance in a multiple disease resistant stock of bread wheat. Crop Improv 34:8-11 (Online: https://www.researchgate.net/publication/221935709_Genetics_of_leaf_and_stripe_rust_resistance_in_a_multiple_disease_resistant_stock_of_bread_wheat/file/79e415069e001629a9.pdf)

Sehgal SK , Kaur G, Gupta ML (2004) Induction of androgenesis and plant regeneration in Indian mustard (Brassica juncea L.Coss.) J Pl Sci Res 20: 125-27 (online: https://www.researchgate.net/publication/233427438_Induction_of_androgenesis_and_plant_regeneration_in_Indian_mustard_(Brassica_juncea_L.Coss.)/file/d912f50aaf65520e5d.pdf)

Sharma S, Bajaj RK, Kaur N, Sehgal SK (2003) Combining ability studies in sunflower (Helianthus annuus L) Crop Improv 30: 69-73 (online: https://www.researchgate.net/publication/221935707_Combining_ability_studies_in_sunflower_(Helianthus_annuus_L.)/file/79e415069dfd975183.pdf) Citations 8

Book Chapter