Boqi Wang, Ph.D. student (Rotation),UCSD
Project: Applying deep learning techniques to model the regulatory impact of chromatin conformation in immune cell types
Daniela Salgado Figueroa, Ph.D. student, UCSD.
Project: Identifying differential chromatin loops.
Joaquin Reyna, Ph.D. student, UCSD.
Project: Identifying potential regulatory variants for type-1 diabetes (T1D) using HiChIP loops.
Kyra Fetter, undergraduate student, UCSD
Project: Constructing a HiChIP database for understanding cell-specific and sample-specific regulatory changes.
Eunice Choi, UCSD, Nov - Dec 2021,
Project: Cell-specific relationship between eQTL effect size and gene expression.
Timothy Arthur, UCSD, Sept - Oct 2019,
Project: Exploring disease-associated pieQTLs using HiChIP.
Halil Tuvan Gezer, June – Sept 2019, Sabanci University, Istanbul, Turkey,
Project: Exploring long-range super-enhancer mediated loops using HiChIP.
Jesse Joseph Solvason, May – June 2019,
Project: Exploring super-enhancers in Naïve B cells.
Margaret Tsui, UCSD, Oct 2017 – June 2018,
Project: Understanding the correlation between ChIP signal, HiChIP signal, and gene expression.
Shashaank Sharma, M. Tech, IIT Kharagpur, July 2013 – April 2014
Project: Automated detection of newborn sleep apnea using video monitoring system (Paper).
Rakesh Kumar Pandit, B. Tech Summer Intern, Birla Institute of Technology Mesra, India, (May - June 2013)
Project: Detection of Burst-Suppression in Neonatal EEG (Paper).
Sayantani Basu, B. Tech 2nd Year, VIT Vellore, India, Internship (Nov – Dec 2015)
Project: Web Crawler for NCBI database.
Mandakinee Singh, B. Tech, IIT Kharagpur, (September 2014 - March 2015)
Project: Phylogeny construction using least squares.
Samadrito Pal, B. Tech Summer Intern, National Institute of Technology, Durgapur, India, (May - June 2014)
Project: Web server for couplet based phylogenetic supertrees.
Debapriya Das, B.Tech Summer Intern, National Institute of Technology, Durgapur, India (May -June 2014)
Project: Genetic algorithm based implementation of least square method for phylogenetic supertrees.
Subhabrata Mukherjee, B.Tech Summer Intern, Heritage Institute of Technology Kolkata, India (May - June 2013)
Project: MATLAB to C conversion of the sleep spindle detection algorithm for neonates.
Soumajyoti Sarkar, B.Tech Summer Intern, IIEST Shibpur, India (May - June 2013)
Project: Design of database for archival and retrieval of neonatal cry data.
Pranjal Sahu, B.Tech, IIT Kharagpur, (September 2012 - February 2013)
Project: Motion detection on newborn video EEG.
Subhabrata Ghoshal, B.Tech Summer Intern, Heritage Institute of Technology Kolkata, India, (May - June 2011)
Project: Automatic sleep spindle detection in raw EEG signal of newborn babies (Paper).