Image Processing and Deep Learning for Bioinformatics

[J7] Sazzed, S.,Determining Protein Secondary Structures in Heterogeneous Medium-resolution Cryo-EM Images using cryoSSESeg, ACS Omega 2024. (accepted, in press)

[C6] Sazzed, S., Scheible, P., He, J., & Wriggers, W., Untangling Irregular Actin Cytoskeleton Architectures in Tomograms of the Cell With Struwwel Tracer , International Journal of Molecular Sciences (IJMS, 2023) .

[C5] Sazzed, S., Scheible, P., He, J., & Wriggers, W., Tracing Randomly Oriented Filaments in a Simulated Actin Network Tomogram , In IEEE International Conference on Bioinformatics and Biomedicine (BIBM), 2022.

[J6] Sazzed, S., Scheible, P., He, J., & Wriggers, W.;, Spaghetti Tracer: A Framework for Tracing Semiregular Filamentous Densities in 3D Tomograms, In Biomolecules, 2022.

[C4] Sazzed, S., Scheible, P., He, J., & Wriggers, W., Tracing filaments in simulated 3D cryo-electron tomography maps using a fast dynamic programming algorithm , In IEEE International Conference on Bioinformatics and Biomedicine (BIBM), 2021.

[C3] Scheible, P.; Sazzed, S;, He, J.; & Wriggers, W., Tomosim: Simulation of filamentous cryo- electron tomograms, In IEEE International Conference on Bioinformatics and Biomedicine (BIBM), 2021.

[J5] Mu, Y.; Sazzed, S.; Alshammari, M.; Sun, J., & He, J., A Tool for Segmentation of Secondary Structures in 3D Cryo-EM Density Map Components Using Deep Convolutional Neural Networks, In Frontiers in Bioinformatics, 2021.

[J4] Song, J.; Patterson, R.; Metlagel, Z.; Krey, J.F.; Hao, S.; Wang, L.; Ng, B.; Sazzed, S.; Kovacs, J.; Wriggers, W., He, J., Barr-Gillespie P. G., and Auer, M. , A cryo-tomography-based volumetric model of the actin core of mouse vestibular hair cell stereocilia lacking plastin 1, In Journal of Structural Biology, 2020.

[C2] Deng, Y.; Mu, Y.; Sazzed, S.; Sun, J.; and He, J., Using Curriculum Learning in Pattern Recognition of 3-dimensional Cryo-electron Microscopy Density Maps, In ACM International Conference on Bioinformatics, Computational Biology and Health Informatics (BCB), 2020.

[J3] Sazzed, S.; Scheible, P.; Alshammari, M.; Wriggers, W.; & He, J, Cylindrical Similarity Measurement for Helices in Medium-Resolution Cryo-Electron Microscopy Density Maps , In Journal of Chemical Information and Modeling (JCIM), 2020.

[C1] Haslam, D.; Sazzed, S.; Wriggers, W.; Kovcas, J.; Song, J.; Auer, M.; & He, J, A Pattern Recognition Tool for Medium-Resolution Cryo-EM Density Maps and Low-Resolution Cryo-ET Density Maps, In International Symposium on Bioinformatics Research and Applications (ISBRA), 2018.

[J2] Sazzed, S., Song, J., Kovacs, J.A., Wriggers, W., Auer, M., and He, J., Tracing actin filament bundles in three-dimensional electron tomography density maps of hair cell stereocilia, In Molecules, 2018.

[J1] Chen, L.; He, J.; Sazzed, S.; & Walker, R.,, An investigation of atomic structures derived from X-ray crystallography and cryo-electron microscopy using distal blocks of side-chains, In Molecules, 2018.

Social-behavioral and Demography Analysis

[C9] Sazzed, S. , Comprehending Lexical and Affective Ontologies in the Demographically Diverse Spatial Social Media Discourse, In International Conference on Machine Learning and Applications (ICMLA), 2023.

[C8] Sazzed, S. , What factors influence the popularity of user-generated text in the creative domain? A case study of book reviews, In International Conference on Machine Learning and Applications (ICMLA), 2023.

[C7] Sazzed, S., The Dynamics of Ukraine-Russian Conflict through the Lens of Demographically Diverse Twitter Data, In IEEE International Conference on Big Data (Big Data), 2022.

[C6] Sazzed, S., Stylometric and Semantic Analysis of Demographically Diverse Non-native English Review Data, In Advances in Social Network Analysis and Mining (ASONAM), 2022.

[C3] Sazzed, S., Revealing the Demographic Attributes of the Authors from the Abstracts of Scientific Articles, In ACM Conference on Hypertext and Social Media (HT), 2022.

[C2] Sazzed, S., An Exploratory Study on the Author Keyphrases Selection Behaviours in Scientific Articles, In Social Computing, Behavioral-Cultural Modeling & Prediction (SBP-BRiMS), 2022. 

[C1] Sazzed, S., Influence of Language Proficiency on the Readability of Review Text and Transformer- based Models for Determining Language Proficiency, In SocialNLP@ The Web Conference (WWW), 2022.

Health Text Mining
[C3] Sazzed, S.;, Comparative analysis of affective and linguistic features in online depression and suicidal discussion forums , In 34th ACM Conference on Hypertext and Social Media (ACM HT), 2023.

[C2] Sazzed, S.;, Discourse Mode Categorization of Bengali Social Media Health Text , In WASSA @ Association of Computational Linguistic (ACL), 2023. 

[C1]  Sazzed, S., BanglaBioMed: A Biomedical Named-Entity Annotated Corpus for Bangla, In BioNLP @ Association of Computational Linguistic (ACL), 2022.

Digital Humanities

[C2]  Sazzed, S.;, Emotion and modifiers in Henry Rider Haggard novels , In WNU @ Association of Computational Linguistic (ACL), 2023.

[C1] Sazzed, S., An Annotated Dataset and Automatic Approaches for Discourse Mode Identification in Low-resource Bengali Language, In MIA@North American Chapter of the Association for Computational Linguistics (NAACL), 2021.

Sentiment Analysis

[C7] Sazzed, S., Understanding Linguistic Variations in Neutral and Strongly Opinionated Reviews., In International Conference on Machine Learning and Applications (ICMLA), 2022.

[J3] Sazzed, S. , Impact of demography on linguistic aspects and readability of reviews and per- formances of sentiment classifiers., In International Journal of Information Management Data Insights, 2022.

[J2] Sazzed, S. & Jayarathna, S., SSentiA: A Self-supervised Sentiment Analyzer for Classification from Unlabeled Data., In Machine Learning with Applications, 2022.

[C6] Sazzed, S., Identifying neutral reviews from unlabeled data: An exploratory study on user ratings and word-level polarity scores, In ACM Conference on Hypertext and Social Media (ACM HT), 2022.

[J1] Sazzed, S., BengSentiLex and BengSwearLex: creating lexicons for sentiment analysis and profanity detection in low-resource Bengali language, In PeerJ Computer Science, 2022.

[C5] Sazzed, S., Improving sentiment classification in low-resource bengali language utilizing cross- lingual self-supervised learning, In International Conference on Natural Language & Information Systems (NLDB), 2021.

[C4] Sazzed, S., Cross-lingual sentiment classification in low-resource Bengali language, In WNUT@Empirical Methods in Natural Language Processing (EMNLP), 2021.

[C3] Sazzed, S., Development of sentiment lexicon in bengali utilizing corpus and cross-lingual resources, In Information Reuse and Integration for Data Science (IRI), 2020.

[C2] Sazzed, S., A Hybrid Approach of Opinion Mining and Comparative Linguistic Analysis of Restaurant Reviews , In Recent Advances in Natural Language Processing (RANLP), 2021.

[C1] Sazzed, S., A sentiment classification in bengali and machine translated english corpus, In Information Reuse and Integration for Data Science (IRI), 2021.

Abusive Content Analysis

[J1] Sazzed, S., Identifying vulgarity in Bengali social media textual content, In PeerJ Computer Science, 2021.

[C2] Sazzed, S., Abusive content detection in transliterated Bengali-English social media corpus, In CALCS@North American Chapter of the Association for Computational Linguistics (NAACL), 2021.

[C1] Sazzed, S., A Lexicon for Profane and Obscene Text Identification in Bengali, In Recent Advances in Natural Language Processing (RANLP), 2021.

Data Mining

[C5] Sazzed, S. and Ullah, S., The Enhancing Efficiency and Privacy in Memory-Based Malware Classification through Feature Selection, In International Conference on Machine Learning and Applications (ICMLA), 2023.

[C4] Sazzed, S., Analyzing Scientometric Indicators of Journals and Chief Editors: A Case Study in Artificial Intelligence (AI) Domain., In International Conference on Computational Data and Social Networks (CSoNet), 2022.

[J1] Sazzed, S., Association between the Rankings of Top Bioinformatics and Medical Informatics Journals and the Scholarly Reputations of Chief Editors., In Publications, 2021.

[C3] Sazzed, S., Feature selection in gene expression profile employing relevancy and redundancy measures and binary whale optimization algorithm (BWOA)., In International Conference on Advanced Data Mining and Applications (ADMA), 2021.

[C2] Sazzed, S., An investigation of the performances of simple gene selection methodologies for cancer classification, In 21st IEEE International Conference on BioInformatics and BioEngineering (BIBE), 2021.

[C1] Sazzed, S., ANOVA-SRC-BPSO: a hybrid filter and swarm optimization-based method for gene selection and cancer classification using gene expression profiles, In Canadian Conference on Artificial Intelligence (Canadian AI), 2021.