Mimura M, Tang Z, Shigenobu S, Yamaguchi K, Yahara T. (2024) Genomic introgression at the margins of the species’ range via the hybrid zones between ecologically distinct Rubus species. Ecology and Evolution https://doi.org/10.1002/ece3.70476
Mimura M, Takeuchi M, Kobayashi T, Hirota SK, Suyama Y, Yamaguchi H, Tabuchi T. (2024) Genetic diversity in the traditional cultivars and wild ancestor of near-threatened Japanese iris (Iris ensata Thunb.). Conservation Genetics, 25: 1079-1086
Kurokawa H, Oguro M, Takayanagi S, Aiba M, Shibata R, Mimura M, Yoshimaru H, Nakashizuka T. (2022) Plant characteristics drive ontogenetic changes in herbivory damage in a temperate forest. Journal of Ecology, 10: 2472-2784
Kikuchi S, Mimura M, Naruhashi N, Setsuko S, Suzuki W. (2022) Phylogenetic inferences using nuclear ribosomal ITS and chloroplast sequences provide insights into the biogeographic origins, diversification timescales and trait evolution of Rubus in the Japanese Archipelago. Plant Systematics and Evolution. 308, Article number 20.
門脇 浩明, 山道 真人, 深野 祐也, 石塚 航, 三村 真紀子, 西廣 淳, 横溝 裕行, 内海 俊介. (2020) 進化を考慮した保全生態学の確立と自然再生に向けて. 保全生態学研究 25:221-234
Mimura M, Suga M (2020) Ambiguous species boundaries: Hybridization and morphological variation in two closely related Rubus species along altitudinal gradients. Ecology and Evolution 10: 7476-7486.
Kitagawa R, Mimura M, Mori AS, Sakai A (2020) Phylogenetic signals in the topographic niche of trees: Current and historical significance of habitat structure on the species arrangement pattern within East Asian rugged forests. Ecological Research 35: 613-624
Okada A., Kikuchi S., Hoshino Y., Kunitake H., and Mimura M. (2020) Phylogeny and trait variation of Japanese Rubus subgenus Ideaobatus. Scientia Horticulturae 264: 109150 https://doi.org/10.1016/j.scienta.2019.109150
Mimura M, T. Yahara, D.P. Faith, E. Vázquez-Domínguez, R.I. Colautti, H. Araki, F. Javadi, J. Núñez-Farfán, A.S. Mori, S. Zhou, P.M. Hollingsworth, L.E. Neaves, Y. Fukano, G.F. Smith, Y-I. Sato, H. Tachida, A.P. Hendry (2017) Understanding and monitoring the consequences of human impacts on intraspecific variation. Evolutionary Applications 10:121-139
Yoshikawa S, Mimura M, Watanabe S, Lin LK, Ota H, Mizoguchi Y. (2016) Historical relationships among wild boar populations of the Ryukyu Archipelago and other Eurasian regions, as inferred from mitochondrial cytochrome b gene sequences no access. Zoological Science 33: 520-526
Kitagawa R, Mimura M, Mori AS, and Sakai A. (2015) Topographic patterns in the phylogenetic structure of temperate forests on steep mountainous terrain. AoB Plants 24: 7
三村真紀子 (2015)キイチゴたちが屋久島で出会うとき：気候変動と遺伝的交流 屋久島学 2: 97-99
Mimura M, Mishima M, Lascoux M, Yahara T. (2014) Range shift and introgression of the rear and leading populations in two ecologically distinct Rubus species. BMC Evolutionary Biology 14:209
Qian S, Saito W, Mimura M, Kaneko S, Isagi Y, Mizumachi E, Mori AS. (2014) Asymmetric gene flow and the distribution of genetic diversity in morphologically distinct Abies mariesii populations in contrasting eco-habitats. Plant Ecology 10.1007/s11258-014-0395-y
Geeta R, Lohmann LG, Magallón S, Faith DP, Hendry A, Crandall K, de Meester L, Webb C, Prieur-Richard A-H, Mimura M, Conti E, Cracraft J, Forest F, Jaramillo C, Donoghue M, Yahara T. (2014) Biodiversity only makes sense in the light of evolution. Journal of Biosciences 39:1-5
Oguchi T, Kashimura Y, Mimura M, Yu Xiang, Matsunaga E, Nanto K, Shimada T, Kikuchi A, Watanabe K. (2014) A multi-year assessment of the environmental impact of transgenic Eucalyptus trees harboring a bacterial choline oxidase gene on biomass, precinct vegetation and the microbial community. Transgenic Research DOI: 10.1007/s11248-014-9809
Mimura M, Ono K, Goka K, Hara T. (2013) Standing variation boosted by multiple sources of introduction contributes to the success of the introduced species, Lotus corniculatus. Biological Invasions 15:2743-2754
Mimura M. (2013) Genetic and phenotypic variation in Lotus japonicus (Regel) K. Larsen, a model legume species. Canadian Journal of Plant Science 93:435-444
Mimura M, Mori AS, Uchida M, Kanda H. (2013) Colonization of vegetation-rich moraines and inference of multiple sources of colonization in the High Arctic for Salix arctica. Conservation Genetics 14:223-229
Yahara T, Javadi F, Onoda Y, de Queiroz LP, Faith DP, Prado D, Akasaka M, Kadoya T, Ishihama F, Davies S, Slik JWF, Yi T, Ma K, Bin C, Darnaedi D, Pennington T, Tuda M, Shimada M, Ito M, Egan AN, Buerki S, Raes N, Kajita T, Vatanparast MM, Mimura M, Tachida T, Iwasa Y, Smith GF, Victor JE, Tandiwe Nkonki. (2013) Global legume diversity assessment: Concepts, key indicators, and strategies. TAXON 62:249-266
Lelmen KE, Yu X, Kikuchi A, Shimazaki T, Mimura M, Watanabe KN. (2010) Mycorrhizal colonization of transgenic Eucalyptus camaldulensis carrying the mangrin gene for salt tolerance. Plant Biotechnology 27(4) 339-344 2010年
Mimura M, Aitken SN. (2010) Local adaptation at the range peripheries of Sitka spruce. Journal of Evolutionary Biology 23:249-258
三村真紀子 (2010) 分布域のダイナミクス--シトカトウヒの分布拡大と局所適応. 林木の育種 236:1-6
森章・三村真紀子・黒川紘子 (2010) 我々は「生態リスク」とどう向き合うのか? 日本生態学会誌 60:323-325
Ahmad D, Kikuchi A, Jatoi SA, Mimura M, Watanabe KN. (2009) Genetic variation of chloroplast DNA in Zingiberaceae taxa from Myanmar assessed by PCR-restriction fragment length polymorphism analysis. Annals of Applied Biology 155:91-101
Mimura M, Barbour RC, Potts BM, Vaillancourt RE, Watanabe KN. (2009) Comparison of contemporary mating patterns in continuous and fragmented Eucalyptus globulus native forests. Molecular Ecology 18:4180-4192
Mimura M, Lelmen KE, Shimazaki T, Kikuchi A, Watanabe KN. (2008) Impact of Environmental Stress-Tolerant Transgenic Potato on Genotypic Diversity of Microbial Communities and Soil Enzyme Activities under Stress Conditions. Microbes and Environments 23:221-228
Jatoi SA, Kikuchi A, Mimura M, San-San-Yi, Watanabe KN. (2008) Relationships of Zingiber species, and genetic variability assessment in ginger (Zingiber officinale) accessions from ex-situ genebank, on-farm and rural markets. Breeding Sciences 58:261-270
Mimura M, Aitken SN. (2007) Adaptive gradients and isolation-by-distance with postglacial migration in Picea sitchensis.Heredity 99:224-232
Mimura M, Aitken SN. (2007) Increased selfing and decreased effective pollen donor number in peripheral relative to central populations in Picea sitchensis (Pinaceae). American Journal of Botany 94:991-998
Mimura M, Coyne CJ, Bambuck MW, Lumpkin TA. (2007) SSR Diversity of Vegetable Soybean [Glycine max (L.) Merr.]. Genetic Resources and Crop Evolution 54:497-508
Mimura M, Yasuda K, Yamaguchi H. (2000) RAPD variation in wild, weedy and cultivated azuki beans in Asia. Genetic Resources and Crop Evolution 47:603-610
三村真紀子 (2016) 日本の生態系に根付く訪問者、外来生物達. 山口裕文・金子務・大形徹・大野朋子（編） 中尾佐助 照葉樹林文化論の展開 – 多角的視座からの位置付け」 北海道大学出版会
三村 真紀子（2013）栽培アズキの成立と伝播 山口裕文（編）栽培植物の自然史II 北海道大学出版会
三村真紀子（2012）雑草学事典 WEB版 (自己間引き、自然選択、ギャップ、寒さの指数、暖かさの指数) 日本雑草学会雑草学事典編集委員会編集
森 章・三村 真紀子（2012）気候変動下での生物多様性保全のための「代替戦略」森 章（編） エコシステムマネジメント ―包括的な生態系の保全と管理へ― 共立出版
三村真紀子（2018）種の境界には (1)〜(3) 洋上アルプス2018年9月号-11月号