M. Esmaily, D. Jia, An augmented streamline upwind/Petrov-Galerkin method for the time-spectral convection-diffusion equation, Journal of Computational Physics, 520, 113484, 2025 [Link].
G. Rydquist, M. Esmaily, Investigating the effect of turbulence on hemolysis through cell-resolved fluid-structure interaction simulations, Physical Review Fluids, 9, 073102, 2024 [Link].
M. Esmaily, D. Jia, A new stabilized time-spectral finite element solver for fast simulation of blood flow, Computer Methods in Applied Mechanics and Engineering, 425, 116939, 2024 [Link].
G. Rydquist, M. Esmaily, Analysis of the suitability of an effective viscosity to represent interactions between red blood cells in shear flow, Journal of Biomechanical Engineering, 146(2): 021007, 2023 [Link].
D. Jia, M. Esmaily, A time-consistent stabilized finite element method for fluids with applications to hemodynamics, Scientific Report, 13, 19120, 2023 [Link].
M. Esmaily, D. Jia, A stabilized formulation for the solution of the incompressible unsteady Stokes equations in the frequency domain, Journal of Computational Physics, 437, 111736, 2023 [Link].
P. Lu, P. Wang, B. Wu, Y. Wang, Y. Liu, W. Cheng, X. Feng, X. Yuan, M. Atteya, H. Ferro, Y. Sug, G. Rydquist, M. Esmaily, J. Butcher, C. Chang, J. Lenz, D. Zheng, B. Zhou, A SOX17-PDGFB signaling axis regulates aortic root development, Nature Communications, 13(1), 1-17, 2022 [Link].
G. Rydquist, M. Esmaily, A cell-resolved, Lagrangian solver for modeling red blood cells dynamics in macroscale flows, Journal of Computational Physics, 461, 111204, 2022 [Link].
D. Jia, M. Esmaily, Characterization of the ejector pump performance for the Assisted Bidirectional Glenn operation, Fluids, 7(1), 31, 2022 [Link].
M. Esmaily, Lyapunov exponent of finite-density inertial particles subjected to Stokes drag, Physical Review Fluids, 6, 114301, 2021 [Link].
C. Meng, A. Bhattacharjee, M. Esmaily, A scalable spectral Stokes solver for simulation of time-periodic flows in complex geometries, Journal of Computational Physics, 445, 110601, 2021 [Link].
D. Jia, M. Peroni, T. Khalapyan, and M. Esmaily, An efficient Assisted Bidirectional Glenn design with lowered Superior Vena Cava pressure for stage-one single ventricle patients, Journal of Biomechanical Engineering, 143 (7), 071008, 2021 [Link].
D. Jia, J. Baker, A. Rameau, and M. Esmaily, Simulation of a vacuum helmet to contain pathogen-bearing droplets in dental, otolaryngologic, and ophthalmologic outpatient interventions, Physics of Fluids, 33, 013307, 2021 [Link].
G. Rydquist, M. Esmaily, An optimal O(N) scheme for simulations of colliding, particle-laden flows on unstructured grids, Journal of Computational Physics, 420, 109703, 2020 [Link].
P. Pakseresht, M. Esmaily, S.V. Apte, A correction scheme for wall-bounded two-way coupled point-particle simulations, Journal of Computational Physics, 420, 109711, 2020 [Link].
M. Esmaily and A. Mani, A modal analysis of the behavior of inertial particles in turbulence subjected to Stokes drag, Physical Review Fluids, 5(8), 084303, 2020 [Link].
M. Esmaily, L. Villafane, A. Banko, G. Iaccarino, J. Eaton, A. Mani, A benchmark for particle- laden turbulent duct flow: A joint computational and experimental study, International Journal of Multiphase Flow, 132, 103410, 2020 [Link].
A. Banko, L. Villafane, J.H. Kim, M. Esmaily, J.K. Eaton, Stochastic Modeling of Direct Radiation Transmission in Particle-Laden Turbulent Flow, Journal of Quantitative Spectroscopy and Radiative Transfer, 226, 1-18, 2018 [Link].
J.K. Shang, M. Esmaily, A. Verma, O. Reinhartz, R.S. Figliola, T-Y. Hsia, J.A. Feinstein, A.L. Marsden, Patient-specific multiscale modeling of the Assisted Bidirectional Glenn, The Annals of Thoracic Surgery, 107(4), 1232-1239, 2019 [Link].
M. Bassenne, M. Esmaily, D. Livescu, P. Moin, and J. Urzay, A dynamic spectrally enriched subgrid-scale model for preferential concentration in particle-laden turbulence, International Journal of Multiphase Flow, 116, 270-280, 2019 [Link].
M. Esmaily and J. Horwitz, A correction scheme for two-way coupled point-particle simulations on anisotropic grids, Journal of Computational Physics, 375, 960-982, 2018 [Link].
M. Esmaily, L. Jofre, A. Mani, G. Iaccarino, A scalable geometric multigrid method for nonsymmetric elliptic systems with applications to variable-density flows, Journal of Computational Physics, 357(15), 142-158, 2018 [Link].
C. Bertoglio, A. Caiazzo, Y. Bazilevs, M. Braack, M. Esmaily, V. Gravemeier, A. Marsden, O. Pironneau, I.E. Vignon-Clemente, W.A. Wall, Benchmark problems for numerical treatment of backflow at open boundaries, International Journal for Numerical Methods in Biomedical Engineering, 34(2), e2918, 2018 [Link].
A. Verma, M. Esmaily, J.K. Shang, R.S. Figliola, J.A. Feinstein, T.-Y. Hsia, A.L. Marsden, Optimization of the Assisted Bidirectional Glenn procedure for first stage single ventricle repair, World Journal for Pediatric and Congenital Heart Surgery, 9(2), 157-170, 2017 [link].
M. Esmaily and Ali Mani, Analysis of the clustering of inertial particles in turbulent flows, Physical Review Fluids, 1, 084202, 2016 [Link].
E. Barbar, I.D. Boyd, M. Esmaily, Monte Carlo modeling of radiative heat transfer in particle-laden flow, Journal of Quantitative Spectroscopy and Radiative Transfer, 184, 146-160, 2016 [link].
M. Esmaily, T-Y. Hsia, A. Marsden, The Assisted Bidirectional Glenn: a novel surgical approach for first stage single ventricle heart palliation, The Journal of Thoracic and Cardiovascular Surgery, 149(3), 699-705, 2015 [link].
M. Esmaily, Y. Bazilevs, A. Marsden, A bi-partitioned iterative algorithm for solving linear systems arising from incompressible flow problems, Computer Methods in Applied Mechanics and Engineering, 286(1), 40-62, 2015 [link].
M. Esmaily, Y. Bazilevs, A. Marsden, Impact of data distribution on the parallel performance of iterative linear solvers with emphasis on CFD of incompressible flows, Computational Mechanics, 55(1), 93-103, 2015 [link].
M. Esmaily, B. Murtuza, T-Y. Hsia, A. Marsden, Simulations reveal adverse hemodynamics in single ventricle patients with multiple systemic to pulmonary shunts, Journal of Biomechanical Engineering, 137(3), 031001-031001-12, 2015 [link].
A. Marsden, M. Esmaily, Multiscale Modeling of Cardiovascular Flows for Clinical Decision Support, Applied Mechanics Reviews, 67(3), 030804, 2015 [link].
J. Zhou, M. Esmaily, T. Conover, A. Marsden, R. Figliola, In vitro study assessment of the assisted bidirectional Glenn procedure for stage one single ventricle repair, Cardiovascular Engineering and Technology, 6(3), 256-257, 2015 [link].
D. Sengupta, E. Kung, M. Esmaily, A.M. Kahn, O. Shirinsky, G.A. Lyskina, J.C. Burns, A.L. Marsden, Thrombotic risk stratification using computational modeling in patients with coronary artery aneurysms following Kawasaki disease, Biomechanics and Modeling in Mechanobiology, 13(6), 1261-1276, 2014 [link].
C.C. Long, M. Esmaily, A.L. Marsden, Y. Bazilevs, Computation of residence time in the simulation of pulsatile ventricular assist devices, Computational Mechanics, 54(4), 911-919, 2014 [link].
G. Arbia, C. Corsini, M. Esmaily, A.L. Marsden, F. Migliavacca, T-Y. Hsia, G. Pennati, I.E. Vignon-Clementel, Numerical blood flow simulation in surgical corrections: what do we need for an accurate analysis?, Journal of Surgical Research, 186(1), 44-55, 2014 [link].
J. Lee, M. Esmaily, E. Kung, H. Cao, T. Beebe, L. Fang, Y. Miller, C-L. Lien, N. C. Chi, A.L. Marsden, T.K. Hsiai, Moving domain computational fluid dynamics to interface with an embryonic model of cardiac morphogenesis, PLoS ONE, 8(8), e72924, 2013 [link].
M. Esmaily, T-Y. Hsia, A. Marsden, A non-discrete method for computation of residence time in fluid mechanics simulations, Physics of Fluids, 25(11), 110802, 2013 [link].
M. Esmaily, Y. Bazilevs, A. Marsden, A new preconditioning technique for implicitly coupled multidomain simulations with applications to hemodynamics, Computational Mechanics, 52(5), 1141-1152, 2013 [link].
D.A. Steinman, et al., Variability of CFD solutions for pressure and flow in a giant aneurysm: The SBC2012 CFD challenge, Journal of Biomechanical Engineering, 135(2), 021016, 2013 [link].
M. Esmaily, I. Vignon-Clementel, R. Figliola, A. Marsden, A modular numerical method for implicit 0D/3D coupling in cardiovascular finite element simulations, Journal of Computational Physics, 224, 63-79, 2013 [link].
M. Esmaily, F. Migliavacca, I. Vignon-Clementel, T-Y. Hsia, A. Marsden, Optimization of shunt placement for the Norwood surgery using multi-domain modeling, Journal of Biomechanical Engineering, 134(5), 051002, 2012 [link].
S. Sankaran, M. Esmaily, J. Guccione, A. Kahn, E. Tseng, A. Marsden, Patient-specific multiscale modeling of blood flow for coronary artery bypass graft surgery, Annals of Biomedical Engineering, 40(10), 2228-2242, 2012 [link].
M. Esmaily, Y. Bazilevs, I. Vignon-Clementel, A. Marsden, A comparison of outlet boundary treatments for prevention of backflow divergence with relevance to blood flow simulations, Computational Mechanics, 48(3), 277-291, 2011 [link].
M. Esmaily, M.B. Shafii, Rotary magnetohydrodynamic micropump based on slug trapping valve, Journal of Microelectromechanical Systems, 20(1), 260-269, 2011 [link].
M. Esmaily, M.B. Shafii, E.A. Dehkordi, Hydromagnetic micropump and flow controller. part A: experiments with nickel particles added to water, Experimental Thermal and Fluid Science, 33(6), 1021-1028, 2009 [link].
M. B. Shafii, E.A. Dehkordi, M. Esmaily, E. E. Koochesfahani, Using nucleators to control freckles in unidirectional solidification, Experimental Thermal and Fluid Science, 33(8), 1209-1215, 2009 [link].
M. Esmaily, A. Marsden, A device for the assisted bidirectional Glenn procedure in pediatric cardiac surgery, (provisional patent).
M. Esmaily, M. B. Shafii, A rotary MHD micropump, Iranian patent No. 56123-003305-A87, January 2009.
M. Esmaily, M. B. Shafii, Hydromagnetic micropump and flow controller, Iranian Patent No. 49631-007236-A85, June 2008.
M. Esmaily and J. Horwitz, Investigation of a four-way coupling regime using a corrected point-particle approach, Center for Turbulence Research, Annual Research Brief, 49-62, 2017 [PDF].
M. Bassenne, M. Esmaily, D. Livescu, J. Urzay, P. Moin, A dynamic spectrally-enriched subgrid-scale model for LES of particle-laden turbulence, Center for Turbulence Research, Annual Research Brief, 3-19, 2017 [PDF].
M. Esmaily and A.Mani, Analytical prediction of the segregation of the inertial particles in turbulent flows, Center for Turbulence Research, Annual Research Brief, 137-148, 2016 [PDF].
T. Flint, A. Thambooz, N. Velasquezz, J. V. Nayakz, M. Selliery, M. Esmaily, P. Moin, A case study of empty nose syndrome by nasal airflow simulation, Center for Turbulence Research, Annual Research Brief, 329-339, 2016 [PDF].
L. Villafane, M. Esmaily, A. Banko, and J. Eaton, A robust method for quantification of preferential concentration from finite number of particles, Center for Turbulence Research, Annual Research Brief, 123-135, 2016 [PDF].
B. Kadoch, M. Bassenne, M. Esmaily, K. Schneider, M. Farge, W. Bos, Multiscale geometrical Lagrangian statistics: Extensions and applications to particle-laden turbulent flows, Center for Turbulence Research, Proceedings of the Summer Program, 53-62, 2016 [PDF].
A. Patel, R. Pecnik, J.W.R. Peeters, B.J. Boersma, S. Hickel, M. Esmaily, Turbulence modulation by variable density and viscosity, Center for Turbulence Research, Proceedings of the Summer Program, 213-222, 2016 [PDF].
M. Esmaily, L. Jofre, G. Iaccarino, A. Mani, A scalable geometric multigrid method for nonsymmetric linear systems arising from the elliptic equations, Center for Turbulence Research, Annual Research Brief, 211-223, 2015 [PDF].
T. Flint, M. Esmaily, A. Thamboo, N. Velasquez, P. Moin, Computational investigation of empty nose syndrome, Center for Turbulence Research, Annual Research Brief, 251-260, 2015 [PDF].
Development of multiscale modeling methods for clinical decision making in single ventricle heart patients, University of California, San Diego, 2014 [PDF].
Fabrication and experimental investigation of a rotary MHD micropump, Sharif University of Technology, 2009 (In Persian) [PDF].
A novel hydro-magnetic micropump and flow controller, Sharif University of Technology, 2007 (In Persian) [PDF].