2021-present

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* corresponding author(s)

+ co-first author(s)

2023

• Characterizing Different Modes of Interplay between Rap1 and H3 using Inducible H3-depletion Yeast.

Khamwachirapithak P, Guillaume-Schoepfer D, Chansongkrow P,Khamwachirapithak P, Guillaume-Schoepfer D, Chansongkrow P, Teichmann SA*, Wigge PA*, Charoensawan V*.

 J Mol Biol. 2023 Nov 5:168355. doi: 10.1016/j.jmb.2023.168355. Online ahead of print.

• Predicting the impact of sequence motifs on gene regulation using single-cell data.

Hepkema J, Lee NK, Stewart BJ, Ruangroengkulrith S, Charoensawan V, Clatworthy MR, Hemberg M.

Genome Biol. 2023 Aug 15;24(1):189. doi: 10.1186/s13059-023-03021-9.

• Computational workflow for investigating highly variable genes in single-cell RNA-seq across multiple time points and cell types.

Arora JK, Opasawatchai A, Teichmann SA*, Matangkasombut P*, Charoensawan V*.

STAR Protoc. 2023 Jun 27;4(3):102387. doi: 10.1016/j.xpro.2023.102387.

2022

• Machine learning applications for transcription level and phenotype predictions.

Chantaraamporn J, Phumikhet P, Nguantad S, Techo T,* Charoensawan V*.

IUBMB Life. 2022 Dec;74(12):1273-1287. doi: 10.1002/iub.2693. 

• PGE2-EP2/EP4 signaling elicits immunosuppression by driving the mregDC-Treg axis in inflammatory tumor microenvironment.

Thumkeo D, Punyawatthananukool S, Prasongtanakij S, Matsuura R, Arima K, Nie H, Yamamoto R, Aoyama N, Hamaguchi H, Sugahara S, Takeda S, Charoensawan V, Tanaka A, Sakaguchi S, Narumiya S.

Cell Rep. 2022 Jun 7;39(10):110914. doi: 10.1016/j.celrep.2022.110914.

• Antisense Oligonucleotide Induction of the hnRNPA1b Isoform Affects Pre-mRNA Splicing of SMN2 in SMA Type I Fibroblasts.

Toosaranont J, Ruschadaariyachat S, Mujchariyakul W, Arora JK, Charoensawan V, Suktitipat B, Palmer TN, Fletcher S, Wilton SD, Mitrpant C.

Int J Mol Sci. 2022 Apr 1;23(7):3937. doi: 10.3390/ijms23073937.

• Single-cell transcriptomic profiling of human dental pulp in sound and carious teeth: a pilot study

Opasawatchai A*, Nguantad S, Sriwilai B, Matangkasombut P,  Matangkasombut O, Srisatjaluk R, Charoensawan V*.

Front Dent Med 2, 93, https://doi.org/10.3389/fdmed.2021.806294

• Editorial: Multi-Disciplinary Approaches to Plant Responses to Climate Change.

Charoensawan V*, Cortijo S, Domijan M, Negrão S.

Front Plant Sci. 2022 Mar 16;13:876432. doi: 10.3389/fpls.2022.876432. eCollection 2022.

• Single-cell temporal analysis of natural dengue infection reveals skin-homing lymphocyte expansion one day before defervescence.

Arora JK, Opasawatchai A, Poonpanichakul T, Jiravejchakul N, Sungnak W; DENFREE Thailand, Matangkasombut O, Teichmann SA*, Matangkasombut P*, Charoensawan V*.

iScience. 2022 Mar 5;25(4):104034. doi: 10.1016/j.isci.2022.104034. eCollection 2022 Apr 15.

• Large-scale comparative transcriptomic analysis of temperature-responsive genes in Arabidopsis thaliana.

Sriden N, Charoensawan V*.

Plant Mol Biol. 2022 Nov;110(4-5):425-443. doi: 10.1007/s11103-021-01223-y. Epub 2022 Jan 1.