So anybody who's making a mod on the OoT Debug ROM is probably going to want to disable certain features, I'll post some information here so that you can do this.
Make file 1 into a normal file:
1. go to B20434 in ROM and write 00000000 over the four bytes there.
2. go to BDF648 and change 15C0001B to 1000001B.
note: opening cutscene does not run - I'll look into it later
Disable noclip (when you press L+dpad-right)
go to C1EC04 and change 11E00080 to 10000080.
Disable map select
go to B96A00 and change the next 0x1C bytes to something. (I haven't been able to remove it without a crash but it can be replaced by the title screen or file select screen...)
I'll update this one if I find out how to do it properly.
Disable debug camera
1. go to AD0AA0 and change 3B2E0001 to 00007021 (fixes controls).
2. go to AD0AEC and change 11200022 to 10000022.
Disable item debug (L at start menu)
go to BEEC20 and change 24190001 to 24190000.