(* = peer reviewed)
Sugita-McEown M, Makuuchi M, Naoe T, Ellinger J, Oga-Baldwin WLQ, McEown K (2024) An fMRI study examining the role of the extended amygdala and amygdala in emotion and inhibitory control in native versus second language processing. PLOS ONE, 19(11): e0310129 (view online).
Ellinger J (2019) Investigation of Process Oriented Guided Inquiry Learning as a Framework for Teaching Science-focused English Courses at a Japanese University. The Asian Conference on Education 2019: Official Conference Proceedings, 229-236 [conference paper] (view online)
*Ellinger J (2019) Reflection on the Use of Process Oriented Guided Inquiry Learning in Science-focused English Classes. Eruditi, 3, 29-40 (view online)
Maninang J, Yoshida L, Ellinger J, Vasques D (2018) Adaptation and Validation of the Revised Two-Factor Study Process Questionnaire (R-SPQ-2F) for Tertiary English Writing Courses in Japan. New Perspectives in Science Education 7th Edition, 503-507 [conference paper]
Ellinger J, Yoshida L, Vasques D, Maninang J (2018) Investigation of the Short Grit Scale for Use in an English Writing Course in Japanese Higher Education. New Perspectives in Science Education 7th Edition, 76-79 [conference paper]
Vasques D, Yoshida L, Ellinger J, Maninang J (2018) Validity and Reliability of the Science Motivation Questionnaire II (SMQ II) in Context of a Japanese University. New Perspectives in Science Education 7th Edition, 80-84 [conference paper]
*Ellinger J and Schmidt-Dannert, C (2017) Construction of a BioBrick™ compatible vector system for Rhodococcus. Plasmid, 90, 1-4 (view online)
*Ellinger J (2016) Beyond Escherichia coli: Synthetic Biology-Focused Platforms and Toolboxes for other Bacteria. Journal of Advanced Research Biotechnology 1(2):4 [review article](view online)
Takasuka T, Hori C, Ellinger J, Tobimatsu Y (2016) Lignocellulose degradation by insect-symbiont microbes. Chemistry and Biology, 54(3), 156-158 [book chapter](view online)
*Sakai Y, Abe K, Nakashima S, Ellinger J, Ferri S, Sode K, Ikebukuro K (2015) Scaffold-fused riboregulators for enhanced gene activation in Synechocystis sp. PCC 6803. MicrobiologyOpen, 4(4), 533-540 (view online)
*Flynn C, Quin M, Ellinger J, Schmidt-Dannert C (2015) Complex Natural Products Synthesis: Isoprenoids, polyketides, (non)ribosomal peptides. Science of Synthesis Reference Library: Biocatalysis in Organic Synthesis. George Theime Verlag KG [book chapter]
*Murdock L, Burke T, Coumoundouros C, Culham D, Deutch C, Ellinger J, Kerr C, Plater S, To E, Wright G, Wood J (2014) Analysis of strains lacking known osmolyte accumulation mechanisms reveals unusual osmotolerance of Escherichia coli CFT073 and contributions of osmolytes and transporters to abiotic stress protection. Applied and Environemental Microbiology 80(17), 5366-5378 (view online)
*Ellinger J, Chylla R, Ulrich E, Markley J (2013) Databases and Software for NMR-Based Metabolomics. Current Metabolomics 1(1), 28-40 [review article] (view online)
*Chae Y, Kim S, Ellinger J, Markley J (2013) Dosage Effects of Salt and pH Stresses on Saccharomyces cerevisiae as Monitored via Metabolites by using Two-Dimensional NMR Spectroscopy. Bulletin of the Korean Chemical Society 34(12), 3602-3607 (view online)
*Clos L, Jofre M, Ellinger J, Westler W, Markley J (2013) NMRbot: Python scripts enable high-throughput data collection on current Bruker BioSpin NMR spectrometers. Metabolomics 9(3), 558-563 (view online)
*Chae Y, Kim S, Ellinger J, Markley J (2012) Tracing Metabolite Footsteps of Escherichia coli Along the Time Course of Recombinant Protein Expression by Two-Dimensional NMR Spectroscopy. Bulletin of the Korean Chemical Society 33(12), 4041-4046 (view online)
*Ellinger J, Miller D, Lewis I, Markley J (2012) Semiautomated Device for Batch Extraction of Metabolites from Tissue Samples. Analytical Chemistry 84, 1809-1812 (view online)
*Schwalbach M, Keating D, Tremaine M, Marner W, Zhang Y, Bothfeld W, Higbee A, Grass J, Cotton C, Reed J, da Costa Sousa L, Jin M, Balan V, Ellinger J, Dale B, Kiley P, Landick, R (2012) Complex physiology and compound stress responses during fermentation of alkaline-pretreated corn stover hydrolysate by an Escherichia coli ethanologen. Applied and Environmental Microbiology 78(9), 3442-3457 (view online)
*Hu K, Ellinger J, Chylla R, Markley J (2011) Measurement of Absolute Concentrations of Individual Compounds in Metabolite Mixtures by Gradient-Selective Time-Zero 1H-13C HSQC with Two Concentration References and Fast Maximum Likelihood Reconstruction Analysis. Analytical Chemistry 83, 9352-9360 (view online)
*Chylla R, Hu K, Ellinger J, Markley J (2011) Deconvolution of Two-Dimensional NMR Spectra by Fast Maximum Likelihood Reconstruction (FMLR): Application to Quantitative Metabolomics. Analytical Chemistry 83, 4871-4880 (view online)
*Hallows W, Yu W, Smith B, Devries M, Ellinger J, Someya S, Shortreed M, Prolla T, Markley J, Smith L, Zhao S, Guan K, Denu J (2011) Sirt3 Promotes the Urea Cycle and Fatty Acid Oxidation during Dietary Restriction. Molecular Cell 41, 1-11 (view online)
*Ellinger J, Lewis I, Markley J (2011) Role of aminotransferases in glutamate metabolism of human erythrocytes. Journal of Biomolecular NMR 49, 221-229 (view online)