Mapping Fusion-Driven Cell Reprogramming Through Integrative Single-Cell Computational Frameworks. F Nazaryabrbekoh, J Huang, SS Shoaib, X Tang, J Kim, BM Ogle, JP Jung*, Res Sq.| doi:10.21203/rs.3.rs-7624240/v1
High Speed Photographic Detection of Particle Distribution During Aerosol and Smoke Generating Surgical Procedures: Effects of Surgical Site Evacuation. KG Bolk, ME Dunham, KF Hoffseth, JP Jung, BM Garcia, RR Walvekar, medRxiv|doi: 10.1101/2021.05.31.21258042
Augmentation of Structure Information to the Sequence-Based Machine Learning-Assisted Directed Protein Evolution. LD Yutzy, KL Nguyen, PA Vallet, J Yu, R He, J Li, Le Yan, J Kim*, JP Jung* (*co-corresponding) (in revision), ChemRxiv|doi:10.26434/chemrxiv-2023-llpnk-v3
Sustained ROS Scavenging and Pericellular Oxygenation by Lignin Composites Rescue HIF-1α and VEGF Levels to Improve Diabetic Wound Neovascularization and Healing. JP Jung*, OO Olutoye II, TJ Prajapati, OS Jung, LD Yutzy, KL Nguyen, SW Wheat, J Huang, BW Padon, F Faruk, SS Keswani, P Kogan, AA Kaul, L Yu, H Li, S Thevasagayampillai, ME Guerra, WD Short, PH Gunaratne, S Balaji* (*co-corresponding) Acta Biomater 2025 Apr 24| doi:10.1101/2022.06.18.496670, bioRxiv|doi:10.1101/2022.06.18.496670.
Cardiac Tissue Engineering: A Pathway for Repair. RA Hortensius, WH Lin, JF Fontenot, BM Ogle, JP Jung*. in Cardiac Electrophysiology Methods and Models. (Eds. PA Iaizzo, MD Eggen, TL Iles) 2024 Dec 25| doi: 10.1007/978-3-031-71067-4_15
The Impact of Lutein-loaded Poly(lactic-co-glycolic acid) Nanoparticles Following Topical Application: An In vitro and In vivo Study. RT Carter, S Swetledge, S Navarro, C Liu, N Ineck, AC Lewin, F Donnarumma, E Bodoki, RW Stout, CE Astete, JP Jung, CM Sabliov, PLoS One 2024 Aug 1|doi:10.1371/journal.pone.0306640
Single-Component Hydrophilic Terpolymer Thin Film Systems for Imparting Surface Chemical Versatility on Various Substrates. YH Ko, HHT Nguyen, CR Branstetter, S Park, J Lee, J Yang*, JP Jung*, M Kim*(*co-corresponding), Polymers 2023 Dec 21|doi:10.3390/polym16010044.
Quantification of Solution-Free Red Blood Cell Staining by Sorption Kinetics of Romanowsky Stains to Agarose Gels. CY Bae*, H Esmaeili, SA Zamin, MJ Seol, E Hwang, SK Beak, Y Song, B Bharti, JP Jung* (*co-corresponding), Anal Methods 2023 Sep 22|doi:10.1039/d3ay01431b, ChemRxiv| doi: 10.26434/chemrxiv-2023-7mclf
Photo-crosslinkable Polymeric Coatings Providing Chemically Versatile Reactive Surfaces on Various Substrates. S Choi, LD Yutzy, YH Ko, J Lee, JP Jung*, M Kim* (*co-corresponding) Chem Mater 2023 Apr 10|doi: 10.1021/acs.chemmater.3c00225.
Injectable Antioxidant and Oxygen-Releasing Lignin Composites to Promote Wound Healing. S Balaji*, WD Short, BW Padon, TJ Prajapati, F Farouk, JA Belgodere, SE Jimenez, NT Deoli, AC Guidry, JC Green, A Kaul, D Son, OS Jung, CE Astete, M Kim, JP Jung* (*co-corresponding) ACS Appl Mater Interface 2023 Apr 6| doi: 10.1021/acsami.2c22982, bioRxiv|doi:10.1101/2022.03.18.484913
Loss of Acta2 in Cardiac Fibroblasts Does Not Prevent Myofibroblast Differentiation or Affect Cardiac Repair After Myocardial Infarction. Y Li, C Li, Q Liu, L Wang, AX Bao, JP Jung, J Francis, JD Molkentin, X Fu, J Mol Cell Cardiol 2022 Aug 22| doi: 10.1016/j.yjmcc.2022.08.003, bioRxiv|doi:10.1101/2021.05.20.445043
Tailoring Physical Properties of Dual Network Acrylamide Hydrogel Composites by Engineering Molecular Structures of the Crosslinked Network. D Son, H Hwang, JF Fontenot, C Lee, JP Jung*, M Kim*. (*co-corresponding) ACS OMEGA 2022 Aug 5|doi: 10.1021/acsomega.2c03031
Advances in Non-Invasive Biosensing Measures to Monitor Wound Healing Progression. WD Short, O Olutoye II, B Padon, UM Parikh, D Colchado, H Vangapandu, S Shams, T Chi, JP Jung, S Balaji. Front Bioeng Biotechnol 2022 Jul 12|doi: 10.3389/fbioe.2022.952198
A Modular Surgical Simulator for Microlaryngoscopy Using Standard Instruments and the Carbon Dioxide Laser. S Bressler, L Adkins, ME Dunham, RR Walvekar, JP Jung, JA Belgodere, AX Bao, LS Breaux, HC Lee, S Saneei, AP Veal, JS Carleton. Laryngoscope Investig Otolaryngol 2022 Jun 21|doi: 10.1002/lio2.854. College of Engineering News
Stability and Ocular Biodistribution of Topically Administered PLGA Nanoparticles. S Swetledge, R Carter, R Stout, CE Astete, JP Jung, CM Sabliov. Sci Rep 2021 Jun 10|doi: 10.1038/s41598-021-90792-5
Attenuating Fibrotic Markers of Patient-Derived Dermal Fibroblasts by Thiolated Lignin Composites. JA Belgodere, D Son, B Jeon, J Choe, AC Guidry, SA Zamin, AX Bao, UM Parikh, S Balaji, M Kim*, JP Jung* (*co-corresponding) ACS Biomater Sci Eng 2021 May 3|doi:10.1021/acsbiomaterials.1c00427
Lignin–Zein Composite: Synthesis, Three-Dimensional Printing, and Microbial Degradation. JG Lee, Y Guo, JA Belgodere, AA Harraq, A Hymel, AJ Pete, KT Valsaraj, MG Benton, MG Miller, JP Jung, B Bharti. ACS Sustainable Chem Eng 2021 Jan 16|doi: 10.1021/acssuschemeng.0c07915
Engineering Extracellular Matrix Proteins to Enhance Cardiac Regeneration after Myocardial Infarction. H Esmaeili, C Li, X Fu*, JP Jung* (*co-corresponding) Front Bioeng Biotechnol 2020 Dec 18|doi:10.3389/fbioe.2020.611936
Distribution of Polymeric Nanoparticles in the Eye: Implications in Ocular Disease Therapy. S Swetledge, JP Jung, R Carter, CM Sabliov. J Nanobiotechnol 2020 Dec 3|doi: 10.1186/s12951-020-00745-9
Machine Intelligence for Nerve Conduit Design and Production. CE Stewart, CF Kan, BR Stewart, HW Sanicola III, JP Jung, OA Sulaiman, D Wang. J Biol Eng 2020 Sep 9|doi: 10.1186/s13036-020-00245-2
Engineering Tissue Fabrication with Machine Intelligence: Generating a Blueprint for Regeneration. J Kim*, JA McKee, JJ Fontenot, JP Jung* (*co-corresponding) Front Bioeng Biotechnol 2019 Dec 11|doi: 10.3389/fbioe.2019.00443
Development of Rolled Scaffold for High-Density Adherent Cell Culture. A YekrangSafakar, KM Hamel, A Mehrnezhad, JP Jung, K Park. Biomed Microdev 2019 Dec 7|doi: 10.1007/s10544-019-0459-9
Modulating Mechanical Properties of Collagen-Lignin Composites. JA Belgodere, SA Zamin, RM Kalinoski, CE Astete, JC Penrod, KM Hamel, BC Lynn, JS Rudra, J Shi*, Jung JP* (*co-corresponding) ACS Appl Bio Mater 2019 Jul 30|doi:10.1021/acsabm.9b00444 (SUPP COVER ARTICLE)
Feasibility and Potential of Three-Dimensional Printing in Laryngotracheal Stenosis. Z Richard, E Jackson, JP Jung, SP Kanotra. J Laryngol Otol 2019 Jun 24|doi:10.1017/S0022215119001208
Directed Printing and Reconfiguration of Thermoresponsive Silica-PNIPAm Nanocomposites. Y Guo, JA Belgodere, Y Ma, JP Jung, B Bharti. Macromol Rapid Comm 2019 Jun 4|doi:10.1002/marc.201900191 (COVER ARTICLE)
Engineering and Imaging Extracellular Matrix Microenvironments, Front Bioeng Biotech. Eds. JP Jung, KB Tilbury, M Parsons
Engineering Breast Cancer Microenvironments And 3D Bioprinting. JA Belgodere, CT King, JB Bursavich, ME Burow, EC Martin*, JP Jung* (*co-corresponding). Front Bioeng Biotechnol 2018 May 24|doi: 10.3389/fbioe.2018.00066
Conserved Pathway Activation Following Xenogenic, Heterotypic Fusion. C Yuan, BT Freeman, TJ McArdle, JP Jung, BM Ogle. FASEB J 2019 Feb 26|doi.org/10.1096/fj.201801700R
A 3D In Vitro Model of the Dermoepidermal Junction Amenable to Mechanical Testing. JP Jung, WH Lin, MJ Riddle, J Tolar, BM Ogle. J Biomed Mater Res A. 2018 Jul 30|doi: 10.1002/jbm.a.36519
Myocardial Tissue Engineering with Cells Derived from Human Induced Pluripotent Stem Cells and a Native-like, High-resolution, 3-dimensionally Printed Scaffold. L Gao, ME Kupfer, JP Jung, L Yang, P Zhang, Y Da Sie, QA Tran, V Ajeti, BT FReeman, VG Fast, PJ Campagnola, BM Ogle, J Zhang. Circ Res. 2017 Jan 9|doi: 10.1161/CIRCRESAHA.116.310277 (Circ Res. COVER ARTICLE)
The Science Times (Korean)
Simple Monolayer Differentiation of Murine Cardiomyocytes via Nutrient Deprivation-Mediated Activation of β-catenin. P Hofbauer*, JP Jung*, TJ McArdle, BM Ogle. Stem Cell Rev Rep (*co-first author). 2016 Aug 19|doi:10.1007/s12015-016-9678-0, Springer Nature Sharing
Solid Organ Fabrication: Comparison of Decellularization to 3D Bioprinting. JP Jung, DB Bhuiyan, BM Ogle. Biomater Res. 2016 Aug 31|doi: 10.1186/s40824-016-0074-2
Single-cell RNA-seq Reveals Activation of Unique Gene Groups as a Consequence of Stem Cell-Parenchymal Cell Fusion. BT Freeman, JP Jung, BM Ogle. Sci Rep. 2016 Mar 21|doi: 10.1038/srep23270.
Heterogeneous Differentiation of Human Mesenchymal Stem Cells in 3D Extracellular Matrix Composites. JP Jung, MK Bache-Wiig, PP Provenzano, BM Ogle. Biores Open Access. 2016 Jan 29|doi:10.1089/biores.2015.0044.
An Integrated Statistical Model for Enhanced Murine Cardiomyocyte Differentiation via Optimized Engagement of 3D Extracellular Matrices. JP Jung, D Hu, IJ Domian, BM Ogle. Sci Rep. 2015 Dec 21|doi: 10.1038/srep18705.
Single-cell RNA-seq of Bone Marrow-derived Mesenchymal Stem Cells Reveals Unique Profiles of Lineage Priming. BT Freeman, JP Jung, BM Ogle. PLoS One. 2015 Sep 9|doi: 10.1371/journal.pone.0136199.
Stem Cell Niche. JP Jung, BM Ogle. The SAGE Encyclopedia of Stem Cell Research, 2015 Aug 10|doi:10.4135/9781483347660.n417
ECM-incorporated Hydrogels Cross-linked via Native Chemical Ligation to Engineer Stem Cell Microenvironments. JP Jung, AJ Sprangers, JR Byce, J Su, JM Squirrell, PB Messersmith, KW Eliceiri, BM Ogle. Biomacromolecules. 2013 Sep 9|doi: 10.1021/bm400728e.
Spatial and Temporal Analysis of Extracellular Matrix Proteins in the Developing Murine Heart: a Blueprint for Regeneration. KP Hanson, JP Jung, QA Tran, SP Hsu, R Iida, V Ajeti, PJ Campagnola, KW Eliceiri, JM Squirrell, GE Lyons, BM Ogle. Tissue Eng Part A. 2013 Feb 11|doi: 10.1089/ten.TEA.2012.0316.
Imaging Cardiac Extracellular Matrices: a Blueprint for Regeneration. JP Jung, JM Squirrell, GE Lyons, KW Eliceiri, BM Ogle. Trends Biotechnol. 2011 Dec 31|doi: 10.1016/j.tibtech.2011.12.001.
A Nondenatured, Noncrosslinked Collagen Matrix to Deliver Stem Cells to the Heart. NA Kouris, JM Squirrell, JP Jung, CA Pehlke, T Hacker, KW Eliceiri, BM Ogle. Regen Med. 2011 Sep 14|doi: 10.2217/rme.11.48.
Multifactorial Optimization of Endothelial Cell Growth Using Modular Synthetic Extracellular Matrices. JP Jung, JV Moyano, JH Collier. Integr Biol (Camb). 2011 Mar;3(3):185-96|doi: 10.1039/c0ib00112k. (COVER ARTICLE, HOT article from RSC Publishing)
Immune Responses to Coiled Coil Supramolecular Biomaterials. JS Rudra, PK Tripathi, DA Hildeman, JP Jung, JH Collier. Biomaterials. 2010 Nov;31(32):8475-83|doi: 10.1016/j.biomaterials.2010.07.068.
Multi-component Extracellular Matrices Based on Peptide Self-assembly. JH Collier, JS Rudra, JZ Gasiorowski, JP Jung. Chem Soc Rev. 2010 Sep;39(9):3413-24|doi: 10.1039/b914337h.
Fibrillar Peptide Gels in Biotechnology and Biomedicine. JP Jung, JZ Gasiorowski, JH Collier. Biopolymers. 2010;94(1):49-59|doi: 10.1002/bip.21326.
A Self-assembling Peptide Acting as an Immune Adjuvant. JS Rudra, YF Tian, JP Jung, JH Collier. Proc Natl Acad Sci U S A. 2010 Jan 12;107(2):622-7|doi: 10.1073/pnas.0912124107.
Nanostructured Materials Constructed from Polypeptides. P Jing, JP Jung, JH Collier. in Nanoscience and its Applications in Biomedicine (Ed. D. Shi, 2009) 96-127|doi:10.1007/978-3-540-49661-8_5
Co-assembling Peptides as Defined Matrices for Endothelial Cells. JP Jung, AK Nagaraj, EK Fox, JS Rudra, JM Devgun, JH Collier. Biomaterials. 2009 Apr;30(12):2400-10|doi: 10.1016/j.biomaterials.2009.01.033.
Modulating the Mechanical Properties of Self-assembled Peptide Hydrogels via Native Chemical Ligation. JP Jung, JL Jones, SA Cronier, JH Collier. Biomaterials. 2008 May;29(13):2143-51|doi: 10.1016/j.biomaterials.2008.01.008.