If you would be interested in doing a master's degree internship with me, please get in touch! Potential topics include:
the evolutionary epidemiology of bacteria (resistance, virulence, etc.)
the epidemiology of E. coli (inter-host transmission and link with the environment)
the evolutionary dynamics of bacterial pangenomes
dating the evolutionary history of pathogens
the evolutionary dynamics of respiratory pathogens (SARS-CoV-2, influenza) in the community
the within-host coevolution of HIV and the immune system
the epidemiological and evolutionary dynamics of HIV virulence
Funding:
I am currently funded by an ERC Starting Grant and an Agence Nationale de la Recherche grant. If you would be interested in doing a PhD or postdoc in my group on the topic of bacterial or SARS-CoV-2 evolution, please get in touch.
In the past I was funded by a CNRS Momentum grant (2019-2021), and a Marie Skłodowska-Curie grant from the European Commission (2015-2017).