***** REPOSITORY OF EXTERNAL PROJECTS *****
These are screenshots taken by me (the site owner). The references for the content represented can be found further down the page.
References
S1
http://104.154.150.186/user/a05998ecab18c92bf053d24b70b599a7/notebooks/demo.ipynb
http://briansimulator.org/electrophysiology/
http://www.nest-simulator.org/index.html
Open Science CBS Neuroimaging Repository: Sharing ultra-high - NCBI
https://www.ncbi.nlm.nih.gov/pubmed/26318051
by CL Tardif - 2016 - Cited by 1 - Related articles
Neuroimage. 2016 Jan 1;124(Pt B):1143-8. doi: 10.1016/j.neuroimage.2015.08.042. Epub 2015 Aug 25. Open Science CBS Neuroimaging Repository: Sharing ...
NITRC: Welcome
https://www.nitrc.org/
NITRC facilitates finding and comparing structural and functional neuroimaging tools and resources. Also provides forums and a NITRC community wiki.
Member login · NITRC: Top Downloads · About NITRC · Browse By Most Active
Cognitive neuroscience neuroimaging repository for ... - ScienceDirect
www.sciencedirect.com/science/article/pii/S1053811915007491
by QR Razlighi - 2015 - Related articles
24 Aug 2015 - Highlights. •. A comprehensive cross-sectional cognitive aging neuroimaging repository is presented. •. The number of participants in each fMRI ...
List of neuroscience databases - Wikipedia
https://en.wikipedia.org/wiki/List_of_neuroscience_databases
A number of online neuroscience databases are available which provide information regarding ... Alzheimer's Disease Neuroimaging Initiative (ADNI), Structural MRI images, Human, Macroscopic, MRI datasets, Healthy and Alzheimer's Disease, Yes .... The PAIN Repository, Structural, Diffusion and Functional MRI datasets ...
Open Science CBS Neuroimaging Repository: Sharing Ultra-High ...
https://www.researchgate.net/.../281309586_Open_Science_CBS_Neuroimaging_Reposi...
Open Science CBS Neuroimaging Repository: Sharing Ultra-High-Field MR Images of the Brain on ResearchGate, the professional network for scientists.
Cognitive Neuroscience Neuroimaging Repository for the Adult Lifespan
https://www.researchgate.net/.../282154306_Cognitive_Neuroscience_Neuroimaging_Re...
With recent advances in neuroimaging technology, it is now possible to image human brain function in vivo, which revolutionized the cognitive neuroscience ...
Deep mind
Tensorflow
https://devblogs.nvidia.com/parallelforall/deep-learning-nutshell-core-concepts/
http://parse.ele.tue.nl/mpeemen
Deep Convolutional Neural Networks Visual System
http://nuit-blanche.blogspot.co.uk/2016/11/seeing-it-all-convolutional-network.html
http://www.nature.com/neuro/journal/v19/n3/full/nn.4244.html?WT.feed_name=subjects_visual-system
S2
https://github.com/deepmind/lab/commit/92aa85f406c788e1a8c17f2add4d9031e7230637
www.deepmind.com
https://github.com/Harry-Muzart
3D brain
Genes to COgntiion
https://brainder.org/research/brain-for-blender/
Download cortical meshes
Clara.io
3D model library
https://github.com/lucklab/erplab/wiki/Filtering-EEG-and-ERPs:-Tutorial
event related potentials simulation
Allen Institute Brain Atals
Egen search
http://human.brain-map.org/microarray/search/show?exact_match=false&search_term=cortex&search_type=gene
Differential search – parrahiccpoanml gyrus, hippocampal formation
Mouse brain connectivity
http://connectivity.brain-map.org/
http://www.thehpp.org/resources.php
http://www.proteinatlas.org/search/insulin
http://bonneaulab.bio.nyu.edu/structure.html
http://interactome.dfci.harvard.edu/S_cerevisiae/
http://www.humanconnectomeproject.org/gallery/
The Connectome Viewer connects Multi-Modal Multi-Scale Neuroimaging and Network Datasets For Analysis and Visualization in Python.
https://www.braininitiative.nih.gov/
The Brain Research through Advancing Innovative Neurotechnologies® (BRAIN)
https://www.humanbrainproject.eu/en_GB/sp5
https://neurorobotics.net/
SP3 Systems and Cognitive Neuroscience
SP4 Theoretical Neuroscience
SP7 High Performance Analytics and Computing Platform
SP8 Medical Informatics Platform
SP9 Neuromorphic Computing Platform
https://282-1235740-gh.circle-artifacts.com/0/home/ubuntu/nilearn/doc/_build/html/auto_examples/connectivity/plot_dict_learning_resting_state.html
Nilearn:
Machine learning for Neuro-Imaging in Python
http://www.geisingeradmi.org/care-innovation/labs/neuroimaging-analytics/
https://research.google.com/bigpicture/
https://articles.uie.com/data_visualization_tools/
Processing.js project
Gephi
https://en.wikipedia.org/wiki/C_(programming_language)
https://www.planet-source-code.com/vb/default.asp?lngWId=3
C++
HTML Logo | by bkanavel HTML Logo | by bkanavel
Hiverhq.com google apps
S3
http://www.opensourcebrain.org/projects?spine=None#welcomeMainContainer
http://www.opensourcebrain.org/projects?spine=None#cells
http://utdallas.edu/~faruckm/Evolutionary_Information_Lab/Software.html
https://www.turbosquid.com/3d-model/neuron xxxx
http://www.neuroconstruct.org/models/index.html#CA1PyramidalCell-N10022
http://www.neuroconstruct.org/index.html
Ucl biophysical neural network mdoellign softwarte
http://www.tnb.ua.ac.be/models/index.shtml
Antwerp ther neurbio and enrueng
http://atlas.gcsc.uni-frankfurt.de/~neugen/examples.html
http://www.neuron.yale.edu/neuron/download
https://senselab.med.yale.edu/ModelDB/FindBySimulator.cshtml
http://neuroph.sourceforge.net/screenshots.html
http://www.neurogems.org/neosim2/Tutorials/Tutorial6.html
NEUROSIM tutorials 3d visualaitons
http://homepages.herts.ac.uk/~comqvs/research.html
Information Processing in Multi-scale Models of Neurons and Neural Networks
http://www.kurzweilai.net/a-computer-like-brain-mechanism-that-makes-sense-of-novel-situations
Kurzweil accelerating intelligence
Uni Colorado boulder
https://www.youtube.com/watch?v=PXTLXXdDVMM
Simulation of Spiking Thalamocortical Brain Network 3 - 3D View, 1M Neurons, 189M Synapses
http://www.genesis-sim.org/GENESIS/
http://steps.sourceforge.net/STEPS/download.php
Computational Neuroscience Unit
Okinawa Institute of Science and Technology
http://www.wardsystems.com/index.asp
http://www.dimkovic.com/node/50 - circuit
SpikeFun 1.16 - Bugfix for Big Haswell Porcessor Group Bug (>64 logical cores)
S4
http://www.3dneuron.eu/?q=openpos
3d big data visualisation
http://www.informationisbeautiful.net/
http://www.visualcomplexity.com/vc/project_details.cfm?id=953&index=953&domain=
https://www.computer.org/csdl/trans/tp/2013/01/ttp2013010221-abs.html
https://www.neuroml.org/getneuroml
https://github.com/NeuroML/NeuroML2/blob/master/examples/NML2_FullNeuroML.nml
https://sourceforge.net/projects/neuroml/?source=typ_redirect
https://grey.colorado.edu/emergent/index.php/Comparison_of_Neural_Network_Simulators
http://neuralensemble.org/trac/PyNN/wiki/HighLevelAPI
https://link.springer.com/chapter/10.1007/978-94-007-3858-4_16#page-1
http://www.ra.cs.uni-tuebingen.de/downloads/SNNS/
http://cortex.cs.may.ie/tools/spikeNNS/index.html
https://netwerkt.wordpress.com/page/2/
http://www.devitep.de/Software/NeuralNetworkSimulator
Evoluting artificial life
http://home.earthlink.net/~perlewitz/sftwr.html
repository
http://www.cnsorg.org/software
http://www.thingiverse.com/thing:17773
3d cad cam rpos, inMoov – DIY robotics
DIY bionics
http://www.hansonrobotics.com/robot/sophia/
DIY biolabs
Genetic engineeeing
Biotech hobbyings
http://collections.plos.org/open-source-toolkit-hardware (no pics)
http://www.oreilly.com/biocoder/
BioCoder is the newsletter of that revolution. It’s about biology as it moves from research labs into startup incubators, hacker spaces, and even homes. It’s about a very old programming language that we’re just beginning to understand, and that’s written in a code made up of organic chemicals. It’s the product of a sharing community of scientists that stretches from grade school to post docs and university faculty.
BioCoder features:
Articles about interesting projects and experiments
Articles about tools, both those you buy and those you build
Visits to DIYbio laboratories
Profiles of key people in the community
Announcements of events and other items of interest
Safety pointers and tips about good laboratory practice
Anything that’s interesting or useful: you tell us!
BMI
http://www.cell.com/trends/biotechnology/fulltext/S0167-7799(10)00138-1
http://cacm.acm.org/magazines/2011/10/131392-improving-brain-computer-interfaces/abstract
Here the arm can be paralysed, or a robot arm.
https://news.brown.edu/articles/2012/05/braingate2
Paralysis control robotic arms by thought, potentially an exoskeleton or endo skeleton.
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