Bioinformatics Tools
Dinosolve: a protein disulfide bonding prediction server
http://hpcr.cs.odu.edu/dinosolve
Ashraf Yaseen and Yaohang Li, “Dinosolve: A Protein Disulfide Bonding Prediction Server using Context-based Features to Enhance Prediction Accuracy”, BMC Bioinformatics, 14(Suppl 13):S9, 2013.
Presentation
C3-Scorpion: a protein 3-state secondary structure prediction server
http://hpcr.cs.odu.edu/c3scorpion
Ashraf Yaseen and Yaohang Li, “Context-based Features Enhance Protein Secondary Structure Prediction Accuracy”. Journal of Chemical Information and Modeling, 54 (3), pp 992–1002, 2014.
Presentation
C8-Scorpion: a protein 8-state secondary structure prediction server
http://hpcr.cs.odu.edu/c8scorpion
Ashraf Yaseen and Yaohang Li, “Context-based Features Enhance Protein Secondary Structure Prediction Accuracy”. Journal of Chemical Information and Modeling, 54 (3), pp 992–1002, 2014.
Presentation
Ashraf Yaseen and Yaohang Li, “Template-based C8-SCORPION: a protein 8-state secondary structure prediction method using structural information and context-based features”, BMC Bioinformatics,15(Suppl 8):S3, 2014.
Presentation
Casa: a protein 2-state solvent accessibility prediction server
Ashraf Yaseen and Yaohang Li, “CASA: a protein solvent accessibility prediction server using context based features to enhance prediction accuracy”, In press, BMC Bioinformatics.
Presentation
FLEXc: a protein flexibility prediction server
Ashraf Yaseen, Mais Nijim, Brandon Williams, Lei Qian, Min Li, Jianxin Wang, and Yaohang Li “FLEXc: protein flexibility prediction using context-based statistics, predicted structural features, and sequence information”. BMC Bioinformatics, vol. 17 Suppl 8, pp. 281, 2016.
Presentation
