Publications

Lina Ruiz, Franklin Sierra-Jerez, Jair Ruiz, Fabio Martinez. COLON: The largest COlonoscopy LONg sequence public database.2024. arXiv:2403.00663

Moreno A, Bautista LX, Martínez F. Cardiac disease discrimination from 3d-convolutional kinematic patterns on cine-MRI sequences. Biomédica. 2024;44 

Sierra Franklin  and Martínez, F. (2024). A non-aligned translation with a neoplastic classifier regularization to include vascular NBI patterns in standard colonoscopies. Accepted in Journal of Computer in Biology and Medicine. Elsevier. 

Sebastian Florez, Santiago Gómez, Julian Garcia, and Fabio Martínez   and Martínez, F. (2024). A deep cascade architecture that generates synthetic parametric maps and segment stroke lesions over CT studies. IV LAWCN - Latin American Workshop on comptuational neuroscience

Jean Portilla, Edgar rangel  and Martínez, F. (2023). A volumetric deep architecture to discriminate parkinsonian patterns from intermediate pose representations. IV LAWCN- Latin American Workshop on comptuational neuroscience

Valenzuela, B., Viáfara, C. C., Penagos, J. J., & Martínez, F. (2023). Wear mechanisms and severity level classification in iron ore transfer chute linings by propagating regional labels coded as embedding deep learning vectors. Materials Today Communications, 107952.

Gómez, S., Mantilla, D., Valenzuela, B., Ortiz, A., D Vera, D., Camacho, P., & Martínez, F. (2023, October). Ischemic Stroke Segmentation from a Cross-Domain Representation in Multimodal Diffusion Studies. In MICCAI - International Conference on Medical Image Computing and Computer-Assisted Intervention (pp. 776-785)

Romero, W. D., Torres-Bermudez, S., Valenzuela, B., Viáfara, C. C., Meléndez, A. M., & Martínez, F. (2023). Geometrical recognition of metallic foam microstructures using a deep learning approach. Materials Today Communications, 107407.

Juan Olmos, Antoine Manzanera, Fabio Martínez. Riemannian SPD learning to represent and characterize fixational oculomotor Parkinsonian abnormalities. Pattern Recognition Letters. 2023. https://doi.org/10.1016/j.patrec.2023.09.012















C. Gonzalez, C.C. Viafara, J.J. Coronado, F. Martinez. (2019). Automatic recognition of worn surfaces exhibiting severe and mild abrasive wear regimes. Wear, 426, 1702-1711.

Contreras, S., Salazar, I., & Martínez, F. (2018). Parkinsonian hand tremor characterization from magnified video sequences. Proceedings Volume 10975, 14th International Symposium on Medical Information Processing and Analysis. spiedigitallibrary.  (Link)

Guayacan, L., Valenzuela, B., & Martínez, F. (2018, Oct). Parkinsonian gait characterization from regional kinematic trajectories. Proceedings Volume 10975, 14th International Symposium on Medical Information Processing and Analysis. spiedigitallibrary.

Moreno, W., Garzón, G., & Martínez, F. (2018, September). Frame-Level Covariance Descriptor for Action Recognition. In Colombian Conference on Computing (pp. 276-290). Springer, Cham.

Rodríguez, J., & Martínez, F. (2018, September). Towards On-Line Sign Language Recognition Using Cumulative SD-VLAD Descriptors. In Colombian Conference on Computing (pp. 371-385). Springer, Cham.

Rodríguez, J., & Martínez, F. (2018, September). A Kinematic Gesture Representation Based on Shape Difference VLAD for Sign Language Recognition. In International Conference on Computer Vision and Graphics (pp. 438-449). Springer, Cham.

Sarmiento, E., Pico, J., & Martinez, F. (2018, April). Cardiac disease prediction from spatio-temporal motion patterns in cine-MRI. In Biomedical Imaging (ISBI 2018), 2018 IEEE 15th International Symposium on (pp. 1305-1308). IEEE.

Martínez, F., Manzanera, A., & Romero, E. (2017). Spatio-temporal multi-scale motion descriptor from a spatially-constrained decomposition for online action recognition. IET Computer Vision, 11(7), 541-549.

Luis Carlos Guayacan, Martínez, F.(2017). Identificación automática de segmentos corporales utilizando un análisis cinemático de la marcha sin marcadores. Encuentro Internacional en Ciencias de la Salud: El saber y la tecnología al servicio de la vida. Abstract in Revista de la Universidad Industrial de Santander. Salud  Vol.49 No.3 Julio - Septiembre de 2017

A multiresolution prostate representation for automatic segmentation in magnetic resonance images. Alvarez, Charlens and Martínez, Fabio and Romero, Eduardo. Medical Physics, 44 (4), 1312--1323. (2017)

Giraldo-Cadavid, L. F., Agudelo-Otalora, L. M., Burguete, J., Arbulu, M., Moscoso, W. D., Martínez, F., ... & Fernández, S. (2016). Design, development and validation of a new laryngo-pharyngeal endoscopic esthesiometer and range-finder based on the assessment of air-pulse variability determinants. Biomedical engineering online, 15(1), 52.

Martínez, F., Manzanera, A., Gouiffes, M., & Nguyen, T. P. (2015). Action-centric Polar Representation of Motion Trajectories for Online Action Recognition. In International Conference on Computer Vision Theory and Applications (VISAPP).

Martínez, F., Manzanera, A., Gouiffès, M., & Braffort, A. (2015, December). A Gaussian mixture representation of gesture kinematics for on-line Sign Language video annotation. In International Symposium on Visual Computing (pp. 293-303). Springer, Cham.

Setkov, A., Carillo, F. M., Gouiffès, M., Jacquemin, C., Vanrell, M., & Baldrich, R. (2015, December). Dacimpro: A novel database of acquired image projections and its application to object recognition. In International Symposium on Visual Computing (pp. 463-473). Springer, Cham.

Martínez, F., Ruano, J., Gómez, M., & Romero, E. (2015). Estimating the size of polyps during actual endoscopy procedures using a spatio-temporal characterization. Computerized Medical Imaging and Graphics, 43, 130-136.

Martínez, F., Manzanera, A., & Romero, E. (2015). Automatic analysis and characterization of the hummingbird wings motion using dense optical flow features. Bioinspiration & biomimetics, 10(1), 016006.

Martínez, F., Romero, E., Dréan, G., Simon, A., Haigron, P., De Crevoisier, R., & Acosta, O. (2014). Segmentation of pelvic structures for planning CT using a geometrical shape model tuned by a multi-scale edge detector. Physics in Medicine & Biology, 59(6), 1471.

Martinez, F., Gómez, F., & Romero, E. (2011). A kinematic method for computing the motion of the body centre-of-mass (CoM) during walking: a Bayesian approach. Computer methods in biomechanics and biomedical engineering, 14(06), 561-572.

Cárdenas, L., Martínez, F., Atehortúa, A., & Romero, E. (2015, December). Quantifying Parkinson's disease progression by simulating gait patterns. In 11th International Symposium on Medical Information Processing and Analysis (Vol. 9681, p. 96810J). International Society for Optics and Photonics.

Trujillo, D., Martínez, F., Atehortúa, A., Alvarez, C., & Romero, E. (2015, December). A characterization of Parkinson's disease by describing the visual field motion during gait. In 11th International Symposium on Medical Information Processing and Analysis (Vol. 9681, p. 96810K). International Society for Optics and Photonics.

Atehortúa, A., Zuluaga, M. A., Martínez, F., Ourselin, S., & Romero, E. (2015, December). Automatic right ventricle (RV) segmentation by propagating a basal spatio-temporal characterization. In 11th International Symposium on Medical Information Processing and Analysis (Vol. 9681, p. 96810N). International Society for Optics and Photonics.

Sarmiento, F., Atehortúa, A., Martínez, F., & Romero, E. (2015, December). Ipsilateral coordination features for automatic classification of Parkinson's disease. In 11th International Symposium on Medical Information Processing and Analysis (Vol. 9681, p. 96810L). International Society for Optics and Photonics.

Infante, K., Martinez, F., & Arbulu, M. (2014). Robot navigation by fusing a spatio-temporal video descriptor with a robust humanoid motion control for kicking a ball. 9th Workshop on Humanoid Soccer Robots. Madrid-Spain.

Ruano, J., Martínez, F., Gómez, M., & Romero, E. (2015, January). A 3D endoscopy reconstruction as a saliency map for analysis of polyp shapes. In 10th International Symposium on Medical Information Processing and Analysis (Vol. 9287, p. 928718). International Society for Optics and Photonics. 

Cárdenas, L., Martínez, F., & Romero, E. (2015, January). Simulation of Parkinsonian gait by fusing trunk learned patterns and a lower limb first order model. In 10th International Symposium on Medical Information Processing and Analysis (Vol. 9287, p. 92871B). International Society for Optics and Photonics. 

Álvarez, C., Martínez, F., & Romero, E. (2015, January). An automatic multi-atlas prostate segmentation in MRI using a multiscale representation and a label fusion strategy. In 10th International Symposium on Medical Information Processing and Analysis (Vol. 9287, p. 92870D). International Society for Optics and Photonics. 

Sarmiento, F., Martínez, F., & Romero, E. (2015, January). Automatic characterization of the Parkinson disease by classifying the ipsilateral coordination and spatiotemporal gait patterns. In 10th International Symposium on Medical Information Processing and Analysis (Vol. 9287, p. 928719). International Society for Optics and Photonics. 

Trujillo, D., Martínez, F., & Romero, E. (2015, January). Characterizing the eye trajectory during the gait towards Parkinson stage identification. In 10th International Symposium on Medical Information Processing and Analysis(Vol. 9287, p. 92871A). International Society for Optics and Photonics. 

Martínez, F., Manzanera, A., & Romero, E. (2014, March). Representing activities with layers of velocity statistics for multiple human action recognition in surveillance applications. In Video Surveillance and Transportation Imaging Applications 2014 (Vol. 9026, p. 90260G). International Society for Optics and Photonics. 

Labrador, A. M. A., Martínez, F., & Castro, E. R. (2013, November). A novel right ventricle segmentation approach from local spatio-temporal MRI information. In Iberoamerican Congress on Pattern Recognition (pp. 206-213). 

Ruano, J., Martinez, F., Gomez, M., & Romero, E. (2013, November). Shape estimation of gastrointestinal polyps using motion information. In IX International Seminar on Medical Information Processing and Analysis (Vol. 8922, p. 89220N). International Society for Optics and Photonics. 

Atehortúa, A., Martínez, F., & Romero, E. (2013, November). A novel right ventricle segmentation strategy using local spatio-temporal MRI information with a prior regularizer term. In IX International Seminar on Medical Information Processing and Analysis (Vol. 8922, p. 892203). International Society for Optics and Photonics. 

Álvarez, C., Martínez, F., & Romero, E. (2013, November). A novel atlas-based approach for MRI prostate segmentation using multiscale points of interest. In IX International Seminar on Medical Information Processing and Analysis (Vol. 8922, p. 89220O). International Society for Optics and Photonics.

Martínez, F., Manzanera, A., & Romero, E. (2012). A motion descriptor based on statistics of optical flow orientations for action classification in video-surveillance. In Multimedia and Signal Processing (pp. 267-274). 

Martinez, F., Manzanera, A., & Romero, E. (2012, November). Analysing the hovering flight of the hummingbird using statistics of the optical flow field. In ICPR workshop on Visual observation and analysis of animal and insect behavior

Martinez, F., Acosta, O., Dréan, G., Simon, A., Haigron, P., De Crevoisier, R., & Romero, E. (2012). Segmentation of pelvic structures from planning CT based on a statistical shape model with a multiscale edge detector and geometrical likelihood measures. Image-Guidance and Multimodal Dose Planning in Radiation Therapy, 26

León J, Martinez, F., & Romero, E. (2012). A robust background subtraction algorithm using a Sigma-Delta estimation. In International Conference on Computer Vision Theory and Applications (Visapp). Rome - Italy.

Cifuentes F,  Martinez, F., & Romero, E. (2012). A 3D physics-based model to simulate normal and pathological gait patterns. In . International Conference on Computer Graphics Theory and Applications (GRAPP). Rome - Italy. 

Martinez, F., León J, & Romero, E. (2011).  Pathology Classification of Gait Human Gestures. International Conference on Computer Vision Theory and Applications (Visapp).  Algarve - Portugal (2011) 

Martínez, F., Manzanera, A., Santa Marta, C., & Romero, E. (2011, November). Characterization of motion cardiac patterns in magnetic resonance cine. In 2011 International Conference on Image Information Processing (pp. 1-5). IEEE. 

Martínez, F., Acosta, O., de Crevoisier, R., & Romero, E. (2012). Local jet features and statistical models in a hybrid Bayesian framework for prostate estimation in CBCT images. In Medical Imaging 2012: Computer-Aided Diagnosis(Vol. 8315, p. 83151R). International Society for Optics and Photonics. 

Gómez, F., Martínez, F., & Romero, E. (2010). Predicting Complex Patterns of Human Movements Using Bayesian Online Learning in Medical Imaging Applications. In Biomedical Image Analysis and Machine Learning Technologies: Applications and Techniques (pp. 283-306). IGI Global. 

Martínez, F., Gómez, F., & Romero, E. (2009). Análisis de vídeo para estimación del movimiento humano: una revisión. Revista Med, 17(1). 

Martínez F., Jaramillo, F. G., & Romero, E. (2010). Desarrollo de un laboratorio de marcha con integracion sincronica mediante una arquitectura en modulos. Acta biológica colombiana, 15(3), 235-250. 

Cifuentes, C., Martínez, F., & Romero, E. (2010). Análisis teórico y computacional de la marcha normal y patológica: una revisión. Revista Med, 18(2), 182-196. 

Martínez F,  Gómez F,  Romero E. (2009) Computational Method for Tracking the Body Center of Mass(CoM) during the Gait: A Bayesian Approach. En: SIB-SIPAIM:  2009.

Pinzón A., Martínez F., Romero E. (2010). Análisis Experimental de la Extracción del Esqueleto por Contracción con Suavizado Laplaciano. SIPAIM: VI Seminario Internacional de Procesamiento y Análisis de Imágenes Médicas (2010). 

León J,  Martínez F,  Romero E. (2010). Classification of Pathological Gait Markerless Pattern. SIPAIM: VI Seminario Internacional de Procesamiento y Análisis de Imágenes Médicas. Bogotá. Colombia (2010). 

León J,  Martínez F,  Romero E. (2011). A Comparison of Σ − ∆ Background Substraction Algorithms for Gait Analysis. (2011). SIPAIM: VII Seminario Internacional de Procesamiento y Análisis de Imágenes Médicas. Bucaramanga. Colombia (2011). 

Cifuentes C,  Martínez F,  Romero E. (2011). Physics-based model to simulate the Parkinsonian gait. SIPAIM: VII Seminario Internacional de Procesamiento y Análisis de Imágenes Médicas. Bucaramanga. Colombia (2011). 

Mosquera C,  Martínez F,  Acosta O, Crevoisier R,  Romero E. Prostate Localization Using a Probabilistic Model. (2011). SIPAIM: VII Seminario Internacional de Procesamiento y Análisis de Imágenes Médicas. Buc. Colombia (2011). 

Martínez F,  Gómez F,  Romero E. (2008) Arquitectura Modular para Laboratorios Clínicos de Marcha.  III Congreso de BioIngeniería e Ingeniería BIomédica. Pereira. Colombia.