2023

• Soman S, Chattopadhyay S, Ram S, Nandicoori VK & Arimbasseri GA. (2023) Codon optimality has minimal effect on determining translation efficiency in mycobacterium tuberculosis. Scientific Reports 13:415, doi: 10.1038/s41598-022-27164-0.

2022

• Dev G, Chawla AS, Gupta S, Bal V, George A, Rath S, Arimbasseri GA. (2022) Differential Regulation of Two Arms of mTORC1 Pathway Fine-Tunes Global Protein Synthesis in Resting B Lymphocytes. Int J Mol Sci. 2022 Dec 16;23(24):16017. doi: 10.3390/ijms232416017. PMID: 36555660

• Ratra Y, Kumar N, Saha MK, Bharadwaj C, Chongtham C, Bais SS, Medigeshi G, Arimbasseri GA, Basak S. (2022) A Vitamin D-RelB/NF-κB Pathway Limits Chandipura Virus Multiplication by Rewiring the Homeostatic State of Autoregulatory Type 1 IFN-IRF7 Signaling. J Immunol. 2022 Jul 18:ji2101054. doi: 10.4049/jimmunol.2101054. Online ahead of print. PMID: 35851541

• Kumar S, Khan MZ, Khandelwal N, Chongtham C, Singha B, Dabla A, Behera D, Singh A, Gopal B, Arimbasseri GA, Kamat SS, Nandicoori VK.(2002) Mycobacterium tuberculosis Transcription Factor EmbR Regulates the Expression of Key Virulence Factors That Aid in Ex Vivo and In Vivo Survival. mBio. 2022 Jun 28;13(3):e0383621. doi: 10.1128/mbio.03836-21. PMID: 35471080

2021

• Das A, Gopinath SD, Arimbasseri GA. (2021) Systemic ablation of vitamin D receptor leads to skeletal muscle glycogen storage disorder in mice. J. Cachexia, Sarcopenia and Muscle. DOI: 10.1002/jcsm.12841. PMID: 34877816

• Pani T, Rajput K, Kar A, Sharma H, Basak R, Medatwal N, Saha S, Dev G, Kumar S, Gupta S, Mukhopadhyay A, Malakar D, Maiti TK, Arimbasseri AG, Deo SVS, Sharma RD, Bajaj A, Dasgupta U. (2021) Alternative splicing of ceramide synthase 2 alters levels of specific ceramides and modulates cancer cell proliferation and migration in Luminal B breast cancer subtype. Cell Death Dis. 12(2):171. doi: 10.1038/s41419-021-03436-x. PMID: 33568634

2020

• Umar D, Das A, Gupta S, Chattopadhyay S, Sarkar D, Mirji G, Kalia J, Arimbasseri GA, Durdik JM, Rath S, George A, Bal V. (2020) Febrile temperature change modulates CD4 T cell differentiation via a TRPV channel-regulated Notch-dependent pathway. Proc Natl Acad Sci U S A. DOI: 10.1073/pnas.1922683117 (PMID: 32839313)

• Chawla AS, Khalsa JK, Dhar A, Gupta S, Umar D, Arimbasseri GA, Bal V, George A, Rath S. (2020) A role for cell-autocrine interleukin-2 in regulatory T-cell homeostasis, Immunology, 160(3):295-309. doi: 10.1111/imm.13194 (PMID: 32187647)

2019

• Dhar A, Chawla M, Chattopadhyay S, Oswal N, Umar D, Gupta S, Bal V, Rath S, George A, Arimbasseri GA, Basak S. (2020) Role of NF-kappaB2-p100 in regulatory T cell homeostasis and activation. Sci Rep. 9(1):13867. doi: 10.1038/s41598-019-50454-z (PMID: 31554891)

• Bhalla P, Shukla A, Vernekar DV, Arimbasseri AG, Sandhu KS, Bhargava P. (2019) Yeast PAF1 complex counters the pol III accumulation and replication stress on the tRNA genes. Sci Rep., 9(1):12892. doi: 10.1038/s41598-019-49316-5

• Khalsa JK, Chawla AS, Prabhu SB, Vats M, Dhar A, Dev G, Das N, Mukherjee S, Tanwar S, Banerjee H, Durdik JM, Bal V, George A, Rath S*, Arimbasseri GA*. Functionally significant metabolic differences between B and T lymphocyte lineages. Immunology. 158(2):104-120. doi: 10.1111/imm.13098 (PMID: 31318442) *co-corresponding author

2018

• Arimbasseri GA. (2018) Interactions between RNAP III transcription machinery and tRNA processing factors. Biochim Biophys Acta Gene Regul Mech. 1861(4):354-360. doi: 10.1016/j.bbagrm.2018.02.003 (PMID: 29428193)

pre-NII publications

• Mattijssen S, Arimbasseri AG, Iben JR, Gaidamakov S, Lee J, Hafner M, Maraia RJ. (2017) LARP4 mRNA codon-tRNA match contributes to LARP4 activity for ribosomal protein mRNA poly(A) tail length protection. Elife. 6. pii: e28889. doi: 10.7554/eLife.28889. (PMID:28895529)

• Maraia RJ* and Arimbasseri AG*. (2017) Factors That Shape Eukaryotic tRNAomes: Processing, Modification and Anticodon–Codon Use. Biomolecules. 7(1). pii: E26. (PMID: 28282871). * corresponding author

• Arimbasseri AG, Iben JR, Wei F, Rijal K, Tomizawa K, Hafner M and Maraia RJ. (2016) Evolving specificity of tRNA 3-methyl-cytidine-32 (m3C32) modification: a subset of tRNAsSer require N6-isopentenylation of A37. RNA. 22(9): 1400-1410 (PMID: 27354703)

• Arimbasseri AG and Maraia RJ. (2016) RNA Polymerase III advances: Structural and tRNA functional views. Trends in Biochemical Sciences. 41(6): 546-559 (PMID: 27068803)

• Arimbasseri AG, Blewett NH, Iben J, Lamichhane TN, Cherkasova V, Hafner M, Maraia RJ. (2015) RNA polymerase III output is functionally linked to tRNA dimethyl-G26 modification. PLoS Genetics. 11(12): e1005671. (PMID: 26720005). a. Accompanying Perspective by M. Boguta, PLoS Genetics 11(12): e1005743

• Lamichhane TN, Arimbasseri AG, Iben JR, Wei F, Tomizawa K and Maraia RJ. (2015) Lack of tRNA-i6A37 modification causes mitochondrial-like metabolic phenotype in S. pombe by limiting activity of cytosolic tRNATyr. RNA.22(4): 583-596 (PMID: 26857223)

• Arimbasseri AG and Maraia RJ. (2015) A high density of cis-information terminates RNA Polymerase III on a two-rail track. RNA Biology. 13(2): 166-171. (PMID: 26636900).

• Arimbasseri AG and Maraia RJ. (2015) Mechanism of transcription termination by RNA polymerase III utilizes a nontemplate-strand sequence-specific signal element. Molecular Cell. 58(6): 1124-1132. (PMID: 25959395) a. Accompanying Preview by Artsimovitch & Belogurov, Molecular Cell 58(6): 974-976.

• Arimbasseri AG and Maraia RJ (2015) Biochemical analysis of transcription termination by RNA polymerase III from yeast Saccharomyces cerevisiae. Methods in Molecular Biology. 1276:185-98.(PMID: 25665564)

• Arimbasseri AG, Kassavetis GA and Maraia RJ. (2014) Comment on Mechanism of eukaryotic RNA polymerase III transcription termination. Science. 345(6196): 524. (PMID: 25082694)

• Rijal K, Maraia RJ and Arimbasseri AG* (2015) A methods review on use of nonsense suppression to study 3' end formation and other aspects of tRNA biogenesis. Gene 556(1): 35-50. (PMID: 25447915) (* Corresponding author)

• Arimbasseri AG and Maraia RJ (2013) Distinguishing core and holoenzyme mechanisms of transcription termination by RNA polymerase III. Mol Cell Biol. 33(8): 1571-1581 (PMID: 23401852)

• Arimbasseri AG, Rijal K and Maraia RJ. (2013) Comparative overview of the RNA polymerase III & II transcription cycles, with focus on pol III termination and reinitiation. Transcription 4(6) (PMID: 24374331)

• Arimbasseri AG, Rijal K and Maraia RJ. (2013) Transcription termination by eukaryotic RNA polymerase III. Biochim Biophys Acta. 1829(3-4): 318-330 (PMID: 23099421)

• Maraia RJ, Arimbasseri AG (2013) It's Sno'ing on Pol III at nuclear pores. Genome Biol. 14(10):137. (PMID: 24176203)

• Iben JR, Mazeika JK, Hasson S, Rijal K, Arimbasseri AG, Russo AN, and Maraia RJ. (2011). Point mutations in the Rpb9-homologous domain of Rpc11 that impair transcription termination by RNA polymerase III. Nucleic Acids Res. 39, 6100-6113 (PMID: 21450810)

• Arimbasseri AG and Bhargava P. (2008) Chromatin Structure and Expression of a Gene Transcribed by RNA Polymerase III Are Independent of H2A.Z Deposition. Mol Cell Biol. 28(8): 2598-2607 (PMID: 18268003)