Trans-Scale Biology Center, NIBB
Papers
Trans-Scale Biology Center, NIBB
Papers
2026.8.7 Asking AI to Draw a “Map of Emotions” Prompting GPT-4 reveals hidden structure among 99 emotion terms (Press Release:NIBB)
AI Facility(E. Watanabe)
2026.8.4 How are oocytes transported through the oviduct? Epithelial folds help, but are not essential (Press Release:NIBB)
Optics and Imaging Facility(K. Kato)
2026.7.6 A New and Efficient Method for Preparing Pseudopregnant Mice Promotes Laboratory Animal Welfare (Press Release:NIBB)
Model Organism Facility (Animal)
2026.5.18 Head stabilization behavior and underlying neural circuit mechanisms discovered in fish without a “neck” (Press Release:NIBB)
Optics and Imaging Facility
2026.4.15 A new way to detect life beyond Earth without knowing what life looks like -Researchers propose a population-scale biosignature based on how life may spread between planets- (Press Release:NIBB)
AI Facility(Lana Sinapayen)
2025.10.3 Discovery of a Novel Intracellular Trafficking Pathway in Plant Cells (Press Release:NIBB)
Model Organism Facility (Plant)
2025.8.7 Refined genome editing in Aphids reveals key gene for overwintering egg adaptation (Press Release:NIBB)
Trans-Omics Facility(S. Shigenobu)
2025.8.4 Establishment of a method for analyzing the gene function of the Japanese rhinoceros beetles using electroporation (Press Release:NIBB)
【Niimi Lab.】Trans-Omics Facility, Data Integration and Analysis Facility, Model Organism Facility (Plant), Emerging Model Organism Facility (T. Niimi, S. Shigenobu)
2024.8.2 Going Slow is Better for Fast Cycling: DNA Replication Mechanism in Pluripotent Stem Cells (Press Release:NIBB)
Trans-Omics Facility
2024.7.19 The Rhythm Led by Plants is Crucial for Symbiosis with Nutrient-Providing Bacteria ~ Discovery that Symbiosis with Rhizobia in Legumes is Regulated by Oscillating Gene Expression ~ (Press Release:NIBB)
Trans-Omics Facility, Model Organism Facility (Plant)
2023.5.12 Eyestalk transcriptome and methyl farnesoate titers provide insight into the physiological changes in the male snow crab, Chionoecetes opilio, after its terminal molt (Press Release:NIBB ※In Japanese)<DOI>
Trans-Omics Facility(T. Mori, S. Shigenobu)
2023.4.13 The photosystem I supercomplex from a primordial green alga Ostreococcus tauri harbors three light-harvesting complex trimers (Press Release:NIBB ※In Japanese)<DOI>
Trans-Omics Facility, Model Organism Facility (Plant)
2023.3.27 Evolutionary differentiation of androgen receptor is responsible for sexual characteristic development in a teleost fish. (Press Release:NIBB ※In Japanese)<DOI>
Optics and Imaging Facility, AI Facility(Y. Kamei, E. Watanabe)
2023.2.16 Uphill energy transfer mechanism for photosynthesis in an Antarctic alga (Press Release:NIBB ※In Japanese)<DOI>
Trans-Omics Facility, Optics and Imaging Facility(Y. Kamei)
2023.2.7 The genome of Lyophyllum shimeji provides insight into the initial evolution of ectomycorrhizal fungal genomes (Press Release:NIBB ※In Japanese)<DOI>
Trans-Omics Facility, Data Integration and Analysis Facility (S. Shigenobu)
2022.12.26 Complex host/symbiont integration of a multi-partner symbiotic system in the eusocial aphid Ceratovacuna japonica (Press Release:NIBB ※In Japanese)<DOI>
Trans-Omics Facility, Optics and Imaging Facility, Data Integration and Analysis Facility (S. Shigenobu, M. Kondo)
2023.1.17 GRAS transcription factors regulate cell division planes in moss overriding the default rule (Press Release:NIBB ※In Japanese)<DOI>
Trans-Omics Facility, Model Organism Facility (Plant), Data Integration and Analysis Facility
2022.10.28 Origin of the ease of association of color names: comparison between humans and AI (Press Release:NIBB ※In Japanese)<DOI>
AI Facility(H. Komatsu, E. Watanabe)
2022.8.8 Remodeling of organelles and microtubules during spermiogenesis in the liverwort Marchantia polymorpha (Press Release:NIBB ※In Japanese)<DOI>
Model Organism Facility (Plant)
2022.8.5 Phylogenetic distribution and expression pattern analyses identified a divergent basal body assembly protein involved in land plant spermatogenesis (Press Release:NIBB ※In Japanese)<DOI>
Model Organism Facility (Plant),Data Integration and Analysis Facility
2022.8.2 Intracellular heat transfer and thermal property revealed by kilohertz temperature imaging with a genetically encoded nanothermometer (Press Release:NIBB ※In Japanese)<DOI>
【Kamei Lab.】Optics and Imaging Facility(J. Sakamoto, Y. Kamei)
2022.8.1 Evolutionary origin of the double-switching system of sexual differentiation in Insecta (Press Release:NIBB)
【Niimi Lab.】Emerging Model Organism Facility,Data Integration and Analysis Facility(Y. Chikami, T. Niimi)
2022.7.28 Diaphorin, a Polyketide Produced by a Bacterial Symbiont of the Asian Citrus Psyllid, Inhibits the Growth and Cell Division of Bacillus subtilis but Promotes the Growth and Metabolic Activity of Escherichia coli (Press Release:NIBB ※In Japanese)<DOI>
【Kamei Lab.】Optics and Imaging Facility(Y. Kamei, M. Kondo)
2022.6.16 CRISPR/Cas9-based simple transgenesis in Xenopus laevis (Press Release:NIBB ※In Japanese)<DOI>
【Niimi Lab.】Emerging Model Organism Facility(K. T. Suzuki)
2022.6.15 Dynamic rearrangement and autophagic degradation of the mitochondria during plant spermiogenesis (Press Release:NIBB)
Model Organism Facility (Plant)
2022.6.9 Lattice-patterned collagen fibers and their dynamics in axolotl skin regeneration (Press Release:NIBB ※In Japanese)<DOI>
【Kamei Lab.】Optics and Imaging Facility(Y. Kamei, J. Sakamoto, S. Nonaka)
2022.5.26 Shedding light on spermatogenesis failure caused by testicular warming (Press Release:NIBB)
Model Organism Facility
2022.5.26 Long-distance translocation of CLAVATA3/ESR-related 2 peptide and its positive effect on roots sucrose status (Press Release:NIBB ※In Japanese)<DOI>
Trans-Omics Facility(Y. Makino)
2022.5.18 Temperature elevation detection in migrating cells. (Press Release:NIBB ※In Japanese)<DOI>
【Kamei Lab.】Optics and Imaging Facility(J. Sakamoto, A. Taniguchi, S. Nonaka, Y. Kamei)
2022.4.15 Laterally biased diffusion of males of the water flea Daphnia magna (Press Release:NIBB ※In Japanese)<DOI>
AI Facility(E. Watanabe)
If you publish a paper on the results obtained by using the Trans-Scale Biology Center, please enter it in the "Acknowledgement" section (in the case of NIBB Collaborative Research Program, you may also enter it in the Funding section). After publication, please send a PDF file (or DOI in the case of open access journals) to our facility or the facility in charge.
【Example】
・(We thank the) NIBB Collaborative Research Program (〇〇NIBB〇〇〇*).
*:Research Project Number
・This work was supported by NIBB Individual Collaborative Research Project (○○NIBB○○○*)to **.
・This work was supported by NIBB Collaborative Research Project for Integrative Imaging (○○NIBB○○○*)to **.
**:Principal Investigator Initials
<Title of each research project>
・Collaborative Research Project for Trans-Scale Biology
・Collaborative Research Project for New Model Organism Development
・Collaborative Research Project for Integrative Genomics
・Collaborative Experiment using the Large Spectrograph