Fall 2022 Course

tomato

Teams of undergraduate and graduate students will collaboratively analyze RNA-seq data sets from the model plant species Arabidopsis thaliana and crop species Solanacea lycopersicum. Researchers will compare tomato transcriptomes sequenced at different depths to several reference genomes ranging from cultivar specific, new HIFI assembled genomes, ancient cultivars and related species in the Solanacea genus.

Photo taken by Dr. Jacob Dums July 2021 in Jordan Hall on NCSU's campus.

Fall 2022 Google Site: https://sites.google.com/ncsu.edu/bit-cpt-f22/home

Fall 2022 STUDENT Research Gallery

Student Researchers from BIT CPT create Bioinformatics Portfolios that can be shared as part of the course's Open Pedagogy praxis. All student researchers have given their consent to make their research publicly available including requests of anonymity. Click on the researcher's name to use the embedded hyperlink and view their research project!

Reference Genomes: 2019 M82 (1) or Heinz 1706 (3)