Many of these publications are open access or otherwise readily available on the internet for example via ResearchGate.
However, if you would like papers to which you do not have access
please email Paul.Sunnucks@monash.edu / Alexandra.Pavlova@monash.edu
Genomes and conservation genomic tools - Papers:
Robledo-Ruiz DA, Austin L, Amos JN, Castrejón-Figueroa J, Harley DKP, Magrath MJL, Sunnucks P, and Pavlova A (2023) Easy-to-use R functions to separate reduced-representation genomic datasets into sex-linked and autosomal loci, and conduct sex assignment. Molecular Ecology Resources http://doi.org/10.1111/1755-0998.13844. Code available at https://github.com/drobledoruiz/conservation_genomics, data at https://doi.org/10.26180/21608028.v6.
Robledo-Ruiz DA, Gan HM, Kaur P, Dudchenko O, Weisz D, Khan R, Lieberman Aiden E, Osipova E, Hiller M, Morales HE, Magrath MJL, Clarke RH, Sunnucks P, Pavlova A. 2022. Chromosome-length genome assembly and linkage map of a Critically Endangered Australian bird: the helmeted honeyeater. GigaScience 11. https://doi.org/10.1093/gigascience/giac025. Data available at https://figshare.com/s/ef864956064b39a48868. Press release https://www.eurekalert.org/news-releases/947790. Blog http://gigasciencejournal.com/blog/honeyeater-genome.
explainer video blog press release
Pavlova A, Harrisson KA, Turakulov R, Lee YP, Ingram BA, Gilligan D, Sunnucks P, Gan HM. 2022. Labile sex chromosomes in the Australian freshwater fish family Percichthyidae. Molecular Ecology Resources, 22, 1639-1655. Fulltext via ResearchGate
https://www.authorea.com/users/397669/articles/510484-genomic-data-shed-light-on-sex-determination-in-australian-freshwater-percichthyid-fish-species-many-ways-to-be-a-male Data available at https://doi.org/10.26180/5ea1736cc3553 and https://doi.org/10.26180/13551713
Gan HM, Falk S, Morales HE, Austin CM, Sunnucks P, Pavlova A. (2019) Genomic evidence of neo-sex chromosomes in the Eastern Yellow Robin Gigascience 8, 1–10 supplementary material blog
Robledo-Ruiz DA, Pavlova A, Clarke RH, Magrath MJL, Quin B, Harrisson KA, Gan HM, Low GW, Sunnucks P. (2022) A novel framework for evaluating in-situ breeding management strategies in endangered populations. Molecular Ecology Resources, 22, 239-253. https://doi.org/10.1111/1755-0998.13476. Video abstract
Austin CM, Tan MH, Harrisson KA, Lee YP, Croft LJ, Sunnucks P, Pavlova A, Gan HM (2017) De novo genome assembly and annotation of Australia's largest freshwater fish, the Murray cod (Maccullochella peelii) from Illumina and Nanopore sequencing reads. Gigascience 6(8)
Sunnucks P & Hales DF (1996) Numerous transposed sequences of mitochondrial cytochrome oxidase I-II in aphids of the genus Sitobion (Hemiptera: Aphididae). Molecular Biology & Evolution 13: 510-524.