Klinsawat W#, Uthaipaisanwong P#, Jenjaroenpun P, Sripiboon S, Wongsurawat T*, Kusonmano K*. Microbiome variations among age classes and diets of captive Asian elephants (Elephas maximus) in Thailand using full-length 16S rRNA nanopore sequencing. Scientific Reports. 2023. 13(1):17685. (Elephant microbiome)
Woraruthai T, Supawatkorn C, Uthaipaisanwong P, Kusonmano K, Wongsurawat T, Jenjaroenpun P, Chaiyen P, Wongnate T. Isolation and characterization of Enterococcus faecalis isolate VT-H1: A highly efficient hydrogen-producing bacterium from palm oil mill effluent (POME). International Journal of Hydrogen Energy, 2023. (Microbe in wastewater treatment system)
Tirapanampai C, Intasian P, Uthaipaisanwong P, Kusonmano K, Weeranoppanant N, Chaiyen P, Wongnate T. Metal additives for boosting hydrogen production in anaerobic fermentation: Focus on the change of gene expression and cost analysis. Journal of Cleaner Production, 2023. 414:137609. (Microbiome in wastewater treatment system)
Pongsopon M, Woraruthai T, Anuwan P, Amawatjana T, Tirapanampai C, Prombun P, Kusonmano K, Weeranoppanant N, Chaiyen P, Wongnate T. Anaerobic co-digestion of yard waste, food waste, and pig slurry in a batch experiment: an investigation on methane potential, performance, and microbial community. Bioresource Technology Reports, 2023. 21:101364. (Microbiome in wastewater treatment system)
Sonthiphand P, Kraidech S, Polart S, Chotpantarat S, Kusonmano K, Uthaipaisanwong P, Rangsiwutisak C, Luepromchai E. Arsenic speciation, the abundance of arsenite-oxidizing bacteria and microbial community structures in groundwater, surface water, and soil from a gold mine. Journal of Environmental Science and Health. 2021 May 26:1-17. (Microbiome in mining area)
Khoiri AN, Cheevadhanarak S, Jirakkakul J, Dulsawat S, Prommeenate P, Tachaleat A, Kusonmano K, Wattanachaisaereekul S, Sutheeworapong S. Comparative Metagenomics Reveals Microbial Signatures of Sugarcane Phyllosphere in Organic Management. Frontiers in Microbiology. 2021. 12:623799. (Sugarcane microbiome)
Sonthiphand P, Rattanaroongrot P, Mek-yong K, Kusonmano K, Rangsiwutisak C, Uthaipaisanwong P, Chotpantarat S, Termsaithong T. Microbial community structure in aquifers associated with arsenic: analysis of 16S rRNA and arsenite oxidase genes. PeerJ. 2021. 9:e10653. (Environmental microbiome)
Puengrang P, Suraraksa B, Prommeenate P, Boonapatcharoen N, Cheevadhanarak S, Tanticharoen M, Kusonmano K*. Diverse Microbial Community Profiles of Propionate-Degrading Cultures Derived from Different Sludge Sources of Anaerobic Wastewater Treatment Plants. Microorganisms. 2020 Feb 18;8(2). pii: E277. (Microbiome in wastewater treatment system)
Pagaretea A, Kusonmano K, Petersen K, Trivedic U, Kimmanced SA, Martíneze JM, Wilsond WH, Hehemannf JH, Allend MJ and Sandaa R. Dip in the gene pool: Metagenomic survey of natural coccolithovirus communities. Virology. 2014;466-467:129-37. (Microbiome from ocean)
Rajudom N, Panichnumsin P, Prommeeenate P, Cheevadhanarak S and Kusonmano K*. Comparison of Read-Based and Metagenome Assembled Genome-Based Approaches for Characterizing Microbial Taxonomic Profiles in Sulfate-Rich Wastewater Treatment Systems. The 34th Annual Meeting of the Thai Society for Biotechnology and International Conference (TSB2022), November 2022, Bangkok, Thailand. (Oral presentation with the best oral presentation award, Bioinformatics and Systems Biology session) (Microbiome analysis in wastewater treatment system)
Rueangmongkolrat N, Uthaipaisanwong P, Kusonmano K and Sonthiphand P. Microbial community and potential arsenic-transforming microorganisms in agricultural soils. International Conference on Sustainable Environment and Energy 2022 (ICoSEE 2022), November 2022, Songkhla, Thailand. (Oral presentation) (Microbiome in agricultural soils)
Sitthipunya A, Uthaipaisanwong P, Sinwat N, Kanjanavaikoon K, Cheevadhanarak S and Kusonmano K*. Detecting microbial communities and pathogens in Thai broiler gastrointestinal tracts based on high-throughput sequencing. The 25th International Annual Symposium on Computational Science and Engineering, June 2022, Khon Kaen, Thailand. (Oral presentation with Honorable oral presentation award). (Chicken gut microbiome)
Uthaipaisanwong P, Wongsurawat T, Klinsawat W, Jenjaroenpun P* and Kusonmano K*. Evaluation of taxonomic classification database for microbiome analysis of nanopore full-length 16S rRNA genes. The 25th International Annual Symposium on Computational Science and Engineering, June 2022, Khon Kaen, Thailand. (Poster presentation with Outstanding poster presentation award). (Databases for microbiome analysis)
Suksong W, Engsatittanawan S, Kongduan V,Boonapatcharoen N, Prommeenate P, Suraraksa B* and Kusonmano K*. Analysis of microbial communities in various full-scale anaerobic wastewater treatment plants. The 25th International Annual Symposium on Computational Science and Engineering, June 2022, Khon Kaen, Thailand. (Poster presentation with Honorable poster presentation award). (Microbiome in wastewater treatment system)
Suksong W, Kongduan V, Inthaklay J, Phalaphol D, Boonapatcharoen N, Kusonmano K*, Suraraksa B*. Synergistic effect of rumen fluid and enriched fatty acid utilizing consortium for improving methane production from cassava pulp residue. The 9th Microbial Ecology & Water Engineering (MEWE) Specialist Conference of The International Water Association (IWA), October 2021, Delft, The Netherlands. (Poster presentation) (Microbiome in wastewater treatment system)
Lipun K, Jurakkakul J, Tachaleat A, Duangfoo T, Cheevadhanarak S, Prommeeenate P*, Kusonmano K*. Alternative Enrichment Cultures for Plant Growth Promoting Microbes from Coffee Plants. The 32nd Annual Meeting of the Thai Society for Biotechnology and International Conference (TSB 2020), November 2020, Bangkok, Thailand. (Poster presentation) (Culturing microbes from coffee plants)
Uthaipaisonwong P, Danwanichwong S, Luangtongkum T, Cheevadhanarak S, Kusonmano K*. Identification of Campylobacter species for poultry-infected samples using V4 hypervariable regions of 16S rRNA gene sequencing. The 32nd Annual Meeting of the Thai Society for Biotechnology and International Conference (TSB 2020), November 2020, Bangkok, Thailand. (Poster presentation) (Microbiome technology for pathogen detection in chickens)
Uthaipaisonwong P, Puengrang P, Rangsiwutisak C, Prombun P, Sitthipunya A, Rajudom N, Kusonmano K*. Beginner’s guide to microbiome analysis. The 11th International Conference on Computational Systems-Biology and Bioinformatics (CSBio 2020), November 2020, Bangkok, Thailand. (Tutorial) (Microbiome analysis training)
Tachaleat A, Salaipeth L, Rangsiwutisak C, Jirakkakul J, Dulsawat S, Duangfoo T, Wattanachaisaereekul S, Karjangthimaporn E, Pejaranonda B, Tanchareon S, Prommeenate P, Kusonmano K and Cheevadhanarak S. Prokaryotic Diversity in the Soils of Healthy and Infected Coffee Plants in Thailand. The 30th Annual Meeting of the Thai Society for Biotechnology and International Conference, November 2019, Phuket, Thailand. (Poster presentation) (Soil microbiome of coffee plants)
Uthaipaisonwong P, Srisuk T, Laeman K, Cheevadhanarak S, Kusonmano K*. Evaluation of shotgun metagenomic classification performance via microbial richness and diversity. The 9th International Conference on Computational Systems-Biology and Bioinformatics (CSBio 2018), December 2018, Bangkok, Thailand. (Oral presentation) (Microbiome data analysis)
Rangsiwutisak C, Cheevadhanarak S, Kusonmano K*. Hypervariable regions assessment for 16S rRNA gene-based metagenomic analysis in activated sludge and anaerobic digestion. The 30th Annual Meeting of the Thai Society for Biotechnology and International Conference, November 2018, Bangkok, Thailand. (Proceedings and oral presentation) (Microbiome analysis in wastewater treatment system)
Laeman K, Uthaipaisonwong P, Rangsiwutisak C, Cheevadhanarak S, Kusonmano K*. SBI Metagenomics: An integrated database and visualization platform for metagenomic studies. The 30th Annual Meeting of the Thai Society for Biotechnology and International Conference, November 2018, Bangkok, Thailand. (Poster presentation) (Microbiome analysis platform)
Chetruengchai W, Suraraksa B, Prommeenate P, Kusonmano K, Cheevadhanarak S and Kittichotirat W. Identification of Microbiomes in Anaerobic Wastewater Treatment Sludge Fed by Different Volatile Acids using 16S rRNA Metagenomics Approach. The 13th Asian Congress on Biotechnology, July 2017, Khon Kaen, Thailand. (Proceedings and oral presentation) (Microbiome in wastewater treatment system)
Paenkaew P, Sutheeworapong S, Chaijaruwanich J, Thammarongtham C, Kusonmano K, Cheevadhanarak S and Prachumwat A. Metatranscriptome Analysis Revealed Putative Causative Agents of Aggregated Transformed Microvilli (ATM) in Penaeus vannamei. The 13th Asian Congress on Biotechnology, July 2017, Khon Kaen, Thailand. (Proceedings and oral presentation) (Microbiome analysis in shrimp)
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*Corresponding author
#Equal contribution