Others

Fragmentary data:

Sayyari, E., Whitfield, J. B., & Mirarab, S. (2017). Fragmentary Gene Sequences Negatively Impact Gene Tree and Species Tree Reconstruction. Molecular Biology and Evolution, 34(12), 3279–3291. https://doi.org/10.1093/molbev/msx261 

10K Bacteria:

Zhu, Q., Mai, U., Pfeiffer, W., Janssen, S., Asnicar, F., Sanders, J. G., Belda-Ferre, P., Al-Ghalith, G. A., Kopylova, E., McDonald, D., Kosciolek, T., Yin, J. B., Huang, S., Salam, N., Jiao, J., Wu, Z., Xu, Z. Z., Cantrell, K., Yang, Y., … Knight, R. (2019). Phylogenomics of 10,575 genomes reveals evolutionary proximity between domains Bacteria and Archaea. Nature Communications, 10(1), 5477. https://doi.org/10.1038/s41467-019-13443-4