UMAP Visualizations of scRNA-seq Dataset
FeaturePlots of Constitutive Microglia Marker Genes Applied to our Dataset
We were able to identify clusters of microglias and other neuron cells from single-cell scRNA-seq gene expression data using Seurat. t-SNE plots, UMAPs, and violin plots were used to visualize the expression levels of cell type specific biomarker genes, and were analyzed collectively to provide cell identifications with high confidence.
Additional Analysis Visualized with Violin Plots to Confirm our Findings